TomoSeq data search

Data search

Results for MligTC455_22908

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22908

1264

26.33

Mlig455_018283

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.034

Region-enriched R5: 1.243/0.00072

Mlig455_018283 {REF} {Length: 2957} {RNA1509_7642} {RNA1310_10501} {RNA815_20352}

Cumulative graph for MligTC455_22908

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.908	4.963	0.08830	0.64080
RegionR2	-0.514	4.963	0.23140	0.60397
RegionR3	0.014	4.963	0.96528	1.00000
RegionR4	0.978	4.963	0.01400	0.07842
RegionR5	1.243	4.963	0.00004	0.00072
RegionR6	0.339	4.963	0.32426	0.91361
RegionR7	0.202	4.963	0.62576	1.00000
RegionR8	-0.355	4.963	0.50167	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.299	4.963	0.38395	1.00000
RegenerationR2	0.24	4.963	0.48932	0.86753
RegenerationR3	-0.026	4.963	0.94252	1.00000
RegenerationR4	-0.326	4.963	0.38846	0.80645
RegenerationR5	0.089	4.963	0.79216	0.98653
RegenerationR6	-0.293	4.963	0.43559	0.76123
RegenerationBL	-0.757	4.963	0.10069	0.37309
RegenerationTP	-0.019	4.963	0.96700	1.00000

Genes with expression patterns similar to MligTC455_22908

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22908	1264	26.33	Mlig455_018283	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.034 Region-enriched R5: 1.243/0.00072		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018283 {REF} {Length: 2957} {RNA1509_7642} {RNA1310_10501} {RNA815_20352}
2.	MligTC455_22909	1229	25.61	Mlig455_031711	Neo: - Age: - Region-enriched R5: 1.257/0.00070	TMEM214	5.96	0.994	0.996	0.998	0.983	0.995	0.994	Mlig455_031711 {REF} {Length: 3767} {TRANSSPLICED} {Pfam: TMEM214, C-terminal, caspase 4 activator [PF10151.11, score=91.9]} {Human: ENSG00000119777, TMEM214, transmembrane protein 214, [RH, Score=57.4, Expect=4e-08]} {Mouse: ENSMUSG00000038828, Tmem214, transmembrane protein 214, [RH, Score=59.7, Expect=9e-09]} {RNA1509_29107, RNA1509_7642} {RNA1310_10501, RNA1509_29107, RNA1509_7642} {RNA1509_29107, RNA1509_7642, RNA815_16505}
3.	MligTC455_17170	4625	96.35	Mlig455_043596	Neo: - Age: -	PDCD6IP	1.688	0.732	-	-	0.956	-	-	Mlig455_043596 {REF} {Length: 3554} {Pfam: BRO1-like domain [PF03097.20, score=244.6]; ALIX V-shaped domain binding to HIV [PF13949.8, score=180.2]} {Human: ENSG00000170248, PDCD6IP, programmed cell death 6 interacting protein, [Score=397, Expect=1e-125]} {Mouse: ENSMUSG00000032504, Pdcd6ip, programmed cell death 6 interacting protein, [Score=386, Expect=1e-121]} {Dmel: FBgn0086346, ALiX, ALG-2 interacting protein X, [Score=455, Expect=8e-149]} {Celegans: WBGene00007010, alx-1, Apoptosis-linked gene 2-interacting protein X 1, [Score=370, Expect=4e-116]} {Smed: dd_Smed_v6_1373_1_2, dd_Smed_v6_1373_1_2, [Score=454, Expect=2e-148]} {RNA1509_783} {RNA1310_3379.1} {RNA815_1575.1}
4.	MligTC455_17169	4643	96.72	Mlig455_043450	Neo: - Age: -	PDCD6IP	1.677	0.725	-	-	0.952	-	-	Mlig455_043450 {REF} {Length: 3695} {Pfam: BRO1-like domain [PF03097.20, score=336.3]; ALIX V-shaped domain binding to HIV [PF13949.8, score=230.1]} {Human: ENSG00000170248, PDCD6IP, programmed cell death 6 interacting protein, [RH, Score=538, Expect=1e-178]} {Mouse: ENSMUSG00000032504, Pdcd6ip, programmed cell death 6 interacting protein, [RH, Score=518, Expect=3e-171]} {Dmel: FBgn0086346, ALiX, ALG-2 interacting protein X, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00007010, alx-1, Apoptosis-linked gene 2-interacting protein X 1, [RH, Score=499, Expect=2e-164]} {Smed: dd_Smed_v6_1373_1_1, dd_Smed_v6_1373_1_1, [RH, Score=642, Expect=0.0]} {RNA1509_783, RNA1509_8013} {RNA1310_3379.1, RNA1509_8013} {RNA1509_8013, RNA815_1575.1}
5.	MligTC455_24343	499	10.39	Mlig455_009796	Neo: - Age: -		1.659	-	-	-	0.950	-	0.709	Mlig455_009796 {REF} {Length: 1301} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8336} {RNA1310_6765} {RNA815_10771}
6.	MligTC455_37271	2658	55.38	Mlig455_039838	Neo: - Age: -		0.979	-	-	-	0.979	-	-	Mlig455_039838 {REF} {Length: 2746} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=84.8]} {Smed: dd_Smed_v6_3502_0_1, dd_Smed_v6_3502_0_1, [Score=104, Expect=5e-29]} {RNA1509_31437, RNA1509_4594} {RNA1310_26155.1, RNA1509_31437, RNA1509_4594} {RNA1509_31437, RNA1509_4594, RNA815_19847}
7.	MligTC455_19722	967	20.14	Mlig455_000253	Neo: - Age: logFC(26M/2M)=0.785 Region-enriched R5: 1.269/0.00005		0.969	-	-	-	-	0.969	-	Mlig455_000253 {REF} {Length: 1479} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=29.2]} {RNA1509_28680, RNA1509_29768} {RNA1310_35244, RNA1509_28680, RNA1509_29768} {RNA1509_28680, RNA1509_29768, RNA815_21002}
8.	MligTC455_28581	302	6.3	Mlig455_017981	Neo: - Age: -	RELB	0.956	-	-	-	-	0.956	-	Mlig455_017981 {REF} {Length: 3139} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=108.8]} {Human: ENSG00000104856, RELB, RELB proto-oncogene, NF-kB subunit, [RH, Score=62.0, Expect=2e-09]} {RNA1509_2844} {RNA1310_21451} {RNA815_4102.2}
9.	MligTC455_53666	1759	36.64	Mlig455_040811	Neo: - Age: -	ACAT1	0.954	-	-	-	0.954	-	-	Mlig455_040811 {REF} {Length: 4843} {TRANSSPLICED} {Pfam: Mpp10 protein [PF04006.14, score=422.2]; Thiolase, N-terminal domain [PF00108.25, score=320.7]; Thiolase, C-terminal domain [PF02803.20, score=134.6]; Family of unknown function (DUF5447) [PF17525.4, score=28.0]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=21.5]} {Human: ENSG00000075239, ACAT1, acetyl-CoA acetyltransferase 1, [RH, Score=408, Expect=2e-129]} {Mouse: ENSMUSG00000032047, Acat1, acetyl-Coenzyme A acetyltransferase 1, [RH, Score=407, Expect=4e-129]} {Dmel: FBgn0029969, CG10932, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00002183, kat-1, Acetyl-CoA acetyltransferase homolog, mitochondrial, [RH, Score=432, Expect=5e-139]} {Smed: dd_Smed_v6_1377_0_1, dd_Smed_v6_1377_0_1, [RH, Score=452, Expect=2e-146]} {RNA1509_7248} {RNA1310_18235, RNA1509_7248} {RNA1509_7248, RNA815_10304}

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