Data search
Results for MligTC455_22942
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22942 | 690 | 14.38 | Mlig455_058334 | Neo: - Age: - |
RINT1 | Mlig455_058334 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: RINT-1 / TIP-1 family [PF04437.15, score=197.8]} {Human: ENSG00000135249, RINT1, RAD50 interactor 1, [RH, Score=207, Expect=4e-56]} {Mouse: ENSMUSG00000028999, Rint1, RAD50 interactor 1, [RH, Score=212, Expect=6e-58]} {RNA1509_51643} {RNA1310_10045} {RNA815_25381} |
Cumulative graph for MligTC455_22942
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.726 | 4.226 | 0.57929 | 1.00000 | |
| RegionR2 | 0.892 | 4.226 | 0.10301 | 0.39549 | |
| RegionR3 | 0.366 | 4.226 | 0.39813 | 0.92765 | |
| RegionR4 | -0.423 | 4.226 | 0.41903 | 0.74704 | |
| RegionR5 | 0.247 | 4.226 | 0.53022 | 0.89305 | |
| RegionR6 | -0.168 | 4.226 | 0.71792 | 1.00000 | |
| RegionR7 | 0.071 | 4.226 | 0.90253 | 1.00000 | |
| RegionR8 | -0.258 | 4.226 | 0.74713 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.167 | 4.226 | 0.20652 | 0.94623 | |
| RegenerationR2 | 0.391 | 4.226 | 0.35774 | 0.78759 | |
| RegenerationR3 | 0.7 | 4.226 | 0.15327 | 0.58302 | |
| RegenerationR4 | 0.605 | 4.226 | 0.22741 | 0.67598 | |
| RegenerationR5 | 1.012 | 4.226 | 0.02178 | 0.25491 | |
| RegenerationR6 | 0.92 | 4.226 | 0.06842 | 0.32799 | |
| RegenerationBL | -0.129 | 4.226 | 0.84509 | 1.00000 | |
| RegenerationTP | 0.639 | 4.226 | 0.32260 | 0.76703 |
Genes with expression patterns similar to MligTC455_22942
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22942 | 690 | 14.38 | Mlig455_058334 | Neo: - Age: - |
RINT1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058334 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: RINT-1 / TIP-1 family [PF04437.15, score=197.8]} {Human: ENSG00000135249, RINT1, RAD50 interactor 1, [RH, Score=207, Expect=4e-56]} {Mouse: ENSMUSG00000028999, Rint1, RAD50 interactor 1, [RH, Score=212, Expect=6e-58]} {RNA1509_51643} {RNA1310_10045} {RNA815_25381} |
| 2. | MligTC455_22943 | 696 | 14.5 | Mlig455_063057 | Neo: - Age: logFC(26M/2M)=-0.308 |
ALDH2 | 5.943 | 0.996 | 0.997 | 0.997 | 0.983 | 1.000 | 0.970 | Mlig455_063057 {REF} {Length: 4904} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=592.6]; RINT-1 / TIP-1 family [PF04437.15, score=195.4]} {Human: ENSG00000111275, ALDH2, aldehyde dehydrogenase 2 family member, [RH, Score=755, Expect=0.0]; ENSG00000137124, ALDH1B1, aldehyde dehydrogenase 1 family member B1, [RH, Score=723, Expect=0.0]} {Mouse: ENSMUSG00000029455, Aldh2, aldehyde dehydrogenase 2, mitochondrial, [RH, Score=748, Expect=0.0]; ENSMUSG00000035561, Aldh1b1, aldehyde dehydrogenase 1 family, member B1, [RH, Score=718, Expect=0.0]} {Dmel: FBgn0012036, Aldh, Aldehyde dehydrogenase, [RH, Score=700, Expect=0.0]} {Celegans: WBGene00000107, alh-1, ALdehyde deHydrogenase, [RH, Score=713, Expect=0.0]} {Smed: dd_Smed_v6_1339_0_1, dd_Smed_v6_1339_0_1, [RH, Score=723, Expect=0.0]} {RNA1509_51643} {RNA1310_10045} {RNA815_2701.1} |
| 3. | MligTC455_17693 | 430 | 8.95 | Mlig455_003361 | Neo: - Age: - |
SH3BP1 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_003361 {REF} {Length: 4075} {tRNA: Val(CAC),pseudo, score=25.2} {Pfam: RhoGAP domain [PF00620.29, score=77.7]} {Human: ENSG00000100092, SH3BP1, SH3 domain binding protein 1, [Score=66.6, Expect=2e-10]; ENSG00000285304, Z83844.3, novel protein, [Score=63.9, Expect=1e-09]} {Mouse: ENSMUSG00000022436, Sh3bp1, SH3-domain binding protein 1, [Score=60.5, Expect=9e-09]; ENSMUSG00000035697, Arhgap45, Rho GTPase activating protein 45, [Score=58.9, Expect=3e-08]; ENSMUSG00000036452, Arhgap26, Rho GTPase activating protein 26, [Score=58.5, Expect=4e-08]} {Smed: dd_Smed_v6_7153_0_1, dd_Smed_v6_7153_0_1, [RH, Score=54.3, Expect=3e-07]} {RNA1509_14948, RNA1509_53252} {RNA1310_4681, RNA1509_14948, RNA1509_53252} {RNA1509_14948, RNA1509_53252, RNA815_3845} |
| 4. | MligTC455_26294 | 129 | 2.68 | Mlig455_016733 | Neo: - Age: - |
DCLRE1A | 0.959 | - | - | - | - | 0.959 | - | Mlig455_016733 {REF} {Length: 6196} {Pfam: DNA repair metallo-beta-lactamase [PF07522.16, score=68.4]} {Human: ENSG00000198924, DCLRE1A, DNA cross-link repair 1A, [Score=75.5, Expect=6e-16]} {Mouse: ENSMUSG00000025077, Dclre1a, DNA cross-link repair 1A, [Score=72.4, Expect=5e-15]} {Dmel: FBgn0037338, Snm1, [Score=55.1, Expect=3e-09]} {RNA1509_45118} {RNA1310_16949.2} {RNA815_5685.1} |
| 5. | MligTC455_27825 | 356 | 7.41 | Mlig455_007119 | Neo: Neoblast, stringent Age: Up-Down-Down Region-enriched R4: 1.443/0.04722 |
SMC4 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_007119 {REF} {Length: 5158} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=134.9]; SMC proteins Flexible Hinge Domain [PF06470.15, score=85.9]; AAA ATPase domain [PF13175.8, score=32.1]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=27.9]; AAA domain [PF13476.8, score=22.9]; P-loop containing region of AAA domain [PF13555.8, score=22.6]} {Human: ENSG00000113810, SMC4, structural maintenance of chromosomes 4, [RH, Score=589, Expect=0.0]} {Mouse: ENSMUSG00000034349, Smc4, structural maintenance of chromosomes 4, [Score=599, Expect=0.0]} {Dmel: FBgn0015391, glu, gluon, [RH, Score=515, Expect=2e-164]} {Celegans: WBGene00004874, smc-4, Structural maintenance of chromosomes protein 4, [RH, Score=329, Expect=8e-96]} {Smed: dd_Smed_v6_5865_0_4, dd_Smed_v6_5865_0_4, [RH, Score=520, Expect=2e-167]} {RNA1509_3181} {RNA1310_1138.1} {RNA815_2120} |
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