TomoSeq data search

Data search

Results for MligTC455_22969

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22969	3483	72.56	Mlig455_023986, Mlig455_055894	Neo: - Age: -	ISCA2	Mlig455_023986 {REF} {Length: 1555} {TRANSSPLICED} {Pfam: Iron-sulphur cluster biosynthesis [PF01521.22, score=41.8]} {Human: ENSG00000165898, ISCA2, iron-sulfur cluster assembly 2, [RH, Score=113, Expect=3e-32]} {Mouse: ENSMUSG00000021241, Isca2, iron-sulfur cluster assembly 2, [RH, Score=122, Expect=9e-36]} {Dmel: FBgn0039205, CG13623, [RH, Score=105, Expect=2e-29]} {Celegans: WBGene00013218, Y54G11A.9, [RH, Score=97.4, Expect=2e-26]} {Smed: dd_Smed_v6_10519_0_1, dd_Smed_v6_10519_0_1, [RH, Score=112, Expect=1e-32]} {RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068} {RNA1310_42834, RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068} {RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068, RNA815_27651} Mlig455_055894 {REF} {Length: 1279} {Pfam: Iron-sulphur cluster biosynthesis [PF01521.22, score=41.8]} {Human: ENSG00000165898, ISCA2, iron-sulfur cluster assembly 2, [RH, Score=114, Expect=3e-32]} {Mouse: ENSMUSG00000021241, Isca2, iron-sulfur cluster assembly 2, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0039205, CG13623, [RH, Score=105, Expect=2e-29]} {Celegans: WBGene00013218, Y54G11A.9, [RH, Score=96.7, Expect=4e-26]} {Smed: dd_Smed_v6_10519_0_1, dd_Smed_v6_10519_0_1, [RH, Score=112, Expect=2e-32]} {RNA1509_50323} {RNA1310_11342} {RNA815_27651}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22969

3483

72.56

Mlig455_023986, Mlig455_055894

Neo: -

Age: -

ISCA2

Mlig455_023986 {REF} {Length: 1555} {TRANSSPLICED} {Pfam: Iron-sulphur cluster biosynthesis [PF01521.22, score=41.8]} {Human: ENSG00000165898, ISCA2, iron-sulfur cluster assembly 2, [RH, Score=113, Expect=3e-32]} {Mouse: ENSMUSG00000021241, Isca2, iron-sulfur cluster assembly 2, [RH, Score=122, Expect=9e-36]} {Dmel: FBgn0039205, CG13623, [RH, Score=105, Expect=2e-29]} {Celegans: WBGene00013218, Y54G11A.9, [RH, Score=97.4, Expect=2e-26]} {Smed: dd_Smed_v6_10519_0_1, dd_Smed_v6_10519_0_1, [RH, Score=112, Expect=1e-32]} {RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068} {RNA1310_42834, RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068} {RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068, RNA815_27651}

Mlig455_055894 {REF} {Length: 1279} {Pfam: Iron-sulphur cluster biosynthesis [PF01521.22, score=41.8]} {Human: ENSG00000165898, ISCA2, iron-sulfur cluster assembly 2, [RH, Score=114, Expect=3e-32]} {Mouse: ENSMUSG00000021241, Isca2, iron-sulfur cluster assembly 2, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0039205, CG13623, [RH, Score=105, Expect=2e-29]} {Celegans: WBGene00013218, Y54G11A.9, [RH, Score=96.7, Expect=4e-26]} {Smed: dd_Smed_v6_10519_0_1, dd_Smed_v6_10519_0_1, [RH, Score=112, Expect=2e-32]} {RNA1509_50323} {RNA1310_11342} {RNA815_27651}

Cumulative graph for MligTC455_22969

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.164	6.334	0.77962	1.00000
RegionR2	0.071	6.334	0.82819	1.00000
RegionR3	0.011	6.334	0.96636	1.00000
RegionR4	0.747	6.334	0.01786	0.09391
RegionR5	-0.15	6.334	0.56515	0.92401
RegionR6	-0.086	6.334	0.75828	1.00000
RegionR7	0.028	6.334	0.92808	1.00000
RegionR8	-0.457	6.334	0.25381	0.87332

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2	6.334	0.04178	0.67581
RegenerationR2	-0.004	6.334	0.99086	1.00000
RegenerationR3	0.151	6.334	0.65305	0.93013
RegenerationR4	-0.214	6.334	0.53636	0.88674
RegenerationR5	0.413	6.334	0.20539	0.63838
RegenerationR6	0.308	6.334	0.34852	0.69357
RegenerationBL	0.316	6.334	0.33474	0.70135
RegenerationTP	-0.734	6.334	0.06072	0.39914

Genes with expression patterns similar to MligTC455_22969

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22969	3483	72.56	Mlig455_023986, Mlig455_055894	Neo: - Age: -	ISCA2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023986 {REF} {Length: 1555} {TRANSSPLICED} {Pfam: Iron-sulphur cluster biosynthesis [PF01521.22, score=41.8]} {Human: ENSG00000165898, ISCA2, iron-sulfur cluster assembly 2, [RH, Score=113, Expect=3e-32]} {Mouse: ENSMUSG00000021241, Isca2, iron-sulfur cluster assembly 2, [RH, Score=122, Expect=9e-36]} {Dmel: FBgn0039205, CG13623, [RH, Score=105, Expect=2e-29]} {Celegans: WBGene00013218, Y54G11A.9, [RH, Score=97.4, Expect=2e-26]} {Smed: dd_Smed_v6_10519_0_1, dd_Smed_v6_10519_0_1, [RH, Score=112, Expect=1e-32]} {RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068} {RNA1310_42834, RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068} {RNA1509_13008, RNA1509_36024, RNA1509_50323, RNA1509_60068, RNA815_27651} Mlig455_055894 {REF} {Length: 1279} {Pfam: Iron-sulphur cluster biosynthesis [PF01521.22, score=41.8]} {Human: ENSG00000165898, ISCA2, iron-sulfur cluster assembly 2, [RH, Score=114, Expect=3e-32]} {Mouse: ENSMUSG00000021241, Isca2, iron-sulfur cluster assembly 2, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0039205, CG13623, [RH, Score=105, Expect=2e-29]} {Celegans: WBGene00013218, Y54G11A.9, [RH, Score=96.7, Expect=4e-26]} {Smed: dd_Smed_v6_10519_0_1, dd_Smed_v6_10519_0_1, [RH, Score=112, Expect=2e-32]} {RNA1509_50323} {RNA1310_11342} {RNA815_27651}
2.	MligTC455_53641	6774	141.12	Mlig455_051114	Neo: - Age: -	GRN	1.729	-	-	-	0.778	0.951	-	Mlig455_051114 {REF} {Length: 2332} {Pfam: Granulin [PF00396.20, score=99.5]} {Human: ENSG00000030582, GRN, granulin precursor, [Score=114, Expect=9e-29]} {Mouse: ENSMUSG00000034708, Grn, granulin, [Score=105, Expect=3e-25]} {Celegans: WBGene00011936, pgrn-1, ProGRaNulin homolog, [Score=85.1, Expect=4e-19]} {Smed: dd_Smed_v6_442_0_1, dd_Smed_v6_442_0_1, [Score=87.8, Expect=7e-21]} {RNA1509_3025, RNA1509_48875} {RNA1310_13165, RNA1509_3025} {RNA1509_3025, RNA815_4475.1}
3.	MligTC455_48515	1857	38.68	Mlig455_031279	Neo: - Age: -	AFG3L2	0.951	-	-	-	-	0.951	-	Mlig455_031279 {REF} {Length: 4942} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=191.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=148.1]; AAA+ lid domain [PF17862.3, score=55.2]; FtsH Extracellular [PF06480.17, score=28.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=22.0]} {Human: ENSG00000141385, AFG3L2, AFG3 like matrix AAA peptidase subunit 2, [RH, Score=763, Expect=0.0]} {Mouse: ENSMUSG00000024527, Afg3l2, AFG3-like AAA ATPase 2, [RH, Score=766, Expect=0.0]} {Dmel: FBgn0036702, CG6512, [RH, Score=796, Expect=0.0]} {Celegans: WBGene00004978, spg-7, SPG (Spastic paraplegia), [RH, Score=713, Expect=0.0]} {Smed: dd_Smed_v6_1250_0_1, dd_Smed_v6_1250_0_1, [RH, Score=783, Expect=0.0]} {RNA1509_2469, RNA1509_32360, RNA1509_43627} {RNA1310_2770.1, RNA1509_2469, RNA1509_32360, RNA1509_43627} {RNA1509_2469, RNA1509_32360, RNA1509_43627, RNA815_2672}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_22969

3483

72.56

Mlig455_023986, Mlig455_055894

Neo: -

Age: -

ISCA2

1.000

MligTC455_53641

6774

141.12

Mlig455_051114

Neo: -

Age: -

GRN

1.729

0.778

0.951

Mlig455_051114 {REF} {Length: 2332} {Pfam: Granulin [PF00396.20, score=99.5]} {Human: ENSG00000030582, GRN, granulin precursor, [Score=114, Expect=9e-29]} {Mouse: ENSMUSG00000034708, Grn, granulin, [Score=105, Expect=3e-25]} {Celegans: WBGene00011936, pgrn-1, ProGRaNulin homolog, [Score=85.1, Expect=4e-19]} {Smed: dd_Smed_v6_442_0_1, dd_Smed_v6_442_0_1, [Score=87.8, Expect=7e-21]} {RNA1509_3025, RNA1509_48875} {RNA1310_13165, RNA1509_3025} {RNA1509_3025, RNA815_4475.1}

MligTC455_48515

1857

38.68

Mlig455_031279

Neo: -

Age: -

AFG3L2

0.951

Mlig455_031279 {REF} {Length: 4942} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=191.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=148.1]; AAA+ lid domain [PF17862.3, score=55.2]; FtsH Extracellular [PF06480.17, score=28.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=22.0]} {Human: ENSG00000141385, AFG3L2, AFG3 like matrix AAA peptidase subunit 2, [RH, Score=763, Expect=0.0]} {Mouse: ENSMUSG00000024527, Afg3l2, AFG3-like AAA ATPase 2, [RH, Score=766, Expect=0.0]} {Dmel: FBgn0036702, CG6512, [RH, Score=796, Expect=0.0]} {Celegans: WBGene00004978, spg-7, SPG (Spastic paraplegia), [RH, Score=713, Expect=0.0]} {Smed: dd_Smed_v6_1250_0_1, dd_Smed_v6_1250_0_1, [RH, Score=783, Expect=0.0]} {RNA1509_2469, RNA1509_32360, RNA1509_43627} {RNA1310_2770.1, RNA1509_2469, RNA1509_32360, RNA1509_43627} {RNA1509_2469, RNA1509_32360, RNA1509_43627, RNA815_2672}