TomoSeq data search

Data search

Results for MligTC455_22972

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22972

438

9.12

Mlig455_023994, Mlig455_055893

Neo: -

Age: -

CAMTA2

Mlig455_023994 {REF} {Length: 5721} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=27.7} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=26.5]} {Human: ENSG00000108509, CAMTA2, calmodulin binding transcription activator 2, [RH, Score=106, Expect=2e-22]} {Mouse: ENSMUSG00000040712, Camta2, calmodulin binding transcription activator 2, [RH, Score=98.2, Expect=3e-20]} {Dmel: FBgn0259234, Camta, Calmodulin-binding transcription activator, [RH, Score=161, Expect=1e-39]} {Smed: dd_Smed_v6_8179_0_1, dd_Smed_v6_8179_0_1, [RH, Score=111, Expect=1e-24]} {RNA1509_11732} {RNA1310_1643} {RNA815_12128}

Mlig455_055893 {REF} {Length: 6939} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=31.3} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=26.5]} {Human: ENSG00000108509, CAMTA2, calmodulin binding transcription activator 2, [RH, Score=106, Expect=2e-22]} {Mouse: ENSMUSG00000040712, Camta2, calmodulin binding transcription activator 2, [RH, Score=98.2, Expect=3e-20]} {Dmel: FBgn0259234, Camta, Calmodulin-binding transcription activator, [RH, Score=161, Expect=1e-39]} {Smed: dd_Smed_v6_8179_0_1, dd_Smed_v6_8179_0_1, [RH, Score=111, Expect=1e-24]} {RNA1509_11732, RNA1509_56761} {RNA1310_1643, RNA1509_56761} {RNA1509_56761, RNA815_12128}

Cumulative graph for MligTC455_22972

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.344	3.538	0.80616	1.00000
RegionR2	0.628	3.538	0.25283	0.63232
RegionR3	-0.093	3.538	0.83023	1.00000
RegionR4	-0.404	3.538	0.48934	0.81642
RegionR5	0.248	3.538	0.50990	0.87291
RegionR6	-0.131	3.538	0.76552	1.00000
RegionR7	0.014	3.538	0.98332	1.00000
RegionR8	0.082	3.538	0.90007	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.231	3.538	0.32885	1.00000
RegenerationR2	-0.138	3.538	0.74597	0.97198
RegenerationR3	-0.443	3.538	0.40132	0.80333
RegenerationR4	-0.509	3.538	0.37118	0.79472
RegenerationR5	0.179	3.538	0.68338	0.94487
RegenerationR6	0.041	3.538	0.93808	1.00000
RegenerationBL	-0.822	3.538	0.29399	0.65613
RegenerationTP	0.001	3.538	0.99775	1.00000

Genes with expression patterns similar to MligTC455_22972

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22972	438	9.12	Mlig455_023994, Mlig455_055893	Neo: - Age: -	CAMTA2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023994 {REF} {Length: 5721} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=27.7} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=26.5]} {Human: ENSG00000108509, CAMTA2, calmodulin binding transcription activator 2, [RH, Score=106, Expect=2e-22]} {Mouse: ENSMUSG00000040712, Camta2, calmodulin binding transcription activator 2, [RH, Score=98.2, Expect=3e-20]} {Dmel: FBgn0259234, Camta, Calmodulin-binding transcription activator, [RH, Score=161, Expect=1e-39]} {Smed: dd_Smed_v6_8179_0_1, dd_Smed_v6_8179_0_1, [RH, Score=111, Expect=1e-24]} {RNA1509_11732} {RNA1310_1643} {RNA815_12128} Mlig455_055893 {REF} {Length: 6939} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=31.3} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=26.5]} {Human: ENSG00000108509, CAMTA2, calmodulin binding transcription activator 2, [RH, Score=106, Expect=2e-22]} {Mouse: ENSMUSG00000040712, Camta2, calmodulin binding transcription activator 2, [RH, Score=98.2, Expect=3e-20]} {Dmel: FBgn0259234, Camta, Calmodulin-binding transcription activator, [RH, Score=161, Expect=1e-39]} {Smed: dd_Smed_v6_8179_0_1, dd_Smed_v6_8179_0_1, [RH, Score=111, Expect=1e-24]} {RNA1509_11732, RNA1509_56761} {RNA1310_1643, RNA1509_56761} {RNA1509_56761, RNA815_12128}
2.	MligTC455_11261	25	0.52	Mlig455_052379	Neo: - Age: -		0.978	-	-	0.978	-	-	-	Mlig455_052379 {REF} {Length: 639} {NoTransDecoderORF} {RNA1310_33296}
3.	MligTC455_41975	116	2.42	Mlig455_014673, Mlig455_014749	Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 5.975 Regeneration-enriched BL: 5.975		0.964	-	-	0.964	-	-	-	Mlig455_014673 {REF} {Length: 1863} {TRANSSPLICED} {RNA1509_24925} {RNA1310_24888, RNA1509_24925} {RNA1509_24925, RNA815_14473} Mlig455_014749 {REF} {Length: 2269} {TRANSSPLICED} {RNA1509_24925, RNA1509_46410} {RNA1310_24888, RNA1509_46410} {RNA1509_46410, RNA815_14473}
4.	MligTC455_49514	319	6.65	Mlig455_044307	Neo: - Age: -	AGBL2	0.963	-	-	0.963	-	-	-	Mlig455_044307 {REF} {Length: 4376} {Pfam: Cytosolic carboxypeptidase N-terminal domain [PF18027.3, score=73.3]; Zinc carboxypeptidase [PF00246.26, score=65.6]} {Human: ENSG00000285501, AGBL2, ATP/GTP binding protein like 2, [Score=560, Expect=0.0]; ENSG00000165923, AGBL2, ATP/GTP binding protein like 2, [Score=560, Expect=0.0]; ENSG00000146856, AGBL3, ATP/GTP binding protein like 3, [Score=535, Expect=7e-173]} {Mouse: ENSMUSG00000040812, Agbl2, ATP/GTP binding protein-like 2, [Score=556, Expect=0.0]; ENSMUSG00000038836, Agbl3, ATP/GTP binding protein-like 3, [Score=540, Expect=8e-174]} {Dmel: FBgn0265726, Nna1, Nna1 carboxypeptidase, [Score=538, Expect=1e-176]} {Celegans: WBGene00018995, ccpp-1, Cytosolic carboxypeptidase 1, [Score=267, Expect=3e-74]} {Smed: dd_Smed_v6_13450_0_1, dd_Smed_v6_13450_0_1, [Score=585, Expect=0.0]} {RNA1509_10895} {RNA1310_1654.2} {RNA815_1445.1}
5.	MligTC455_08320	20	0.42	Mlig455_004069	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_004069 {REF} {Length: 304} {NoTransDecoderORF} {RNA1310_74245}
6.	MligTC455_46143	279	5.81	Mlig455_033068	Neo: - Age: logFC(26M/2M)=-0.620		0.956	-	-	0.956	-	-	-	Mlig455_033068 {REF} {Length: 1261} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=53.8]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [Score=174, Expect=4e-53]} {RNA1509_53212} {RNA1310_31009, RNA1509_53212} {RNA1509_53212, RNA815_13367}
7.	MligTC455_52594	147	3.07	Mlig455_066168	Neo: - Age: -	DLG5	0.954	-	-	0.954	-	-	-	Mlig455_066168 {REF} {Length: 4401} {Pfam: PDZ domain [PF17820.3, score=35.8]; PDZ domain [PF00595.26, score=34.8]; YL1 nuclear protein [PF05764.15, score=18.9]} {Human: ENSG00000151208, DLG5, discs large MAGUK scaffold protein 5, [Score=59.7, Expect=2e-08]; ENSG00000274429, DLG5, discs large MAGUK scaffold protein 5, [Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000021782, Dlg5, discs large MAGUK scaffold protein 5, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_2209_0_1, dd_Smed_v6_2209_0_1, [Score=48.5, Expect=1e-05]} {RNA1310_22171} {RNA815_9664}
8.	MligTC455_16216	158	3.3	Mlig455_068299	Neo: - Age: logFC(26M/2M)=0.459	AXIN2	0.952	-	-	0.952	-	-	-	Mlig455_068299 {REF} {Length: 5180} {TRANSSPLICED} {Pfam: DIX domain [PF00778.19, score=84.1]; Regulator of G protein signaling domain [PF00615.21, score=28.6]} {Human: ENSG00000168646, AXIN2, axin 2, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [Score=110, Expect=1e-24]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_4900_0_1, dd_Smed_v6_4900_0_1, [RH, Score=114, Expect=2e-26]} {RNA1509_26666, RNA1509_46700} {RNA1310_18759, RNA1509_46700} {RNA1509_46700, RNA815_19659}
9.	MligTC455_52068	1020	21.25	Mlig455_025175, Mlig455_029872, Mlig455_063946	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_025175 {REF} {Length: 2628} {Pfam: TIR domain [PF13676.8, score=87.5]; TIR domain [PF01582.22, score=23.3]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=162, Expect=3e-42]} {RNA1509_21634} {RNA1310_3928} {RNA815_4298} Mlig455_029872 {REF} {Length: 2468} {Pfam: TIR domain [PF13676.8, score=86.6]; TIR domain [PF01582.22, score=23.5]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=162, Expect=3e-42]} {RNA1509_21634} {RNA1310_3928} {RNA815_4298} Mlig455_063946 {REF} {Length: 2373} {Pfam: TIR domain [PF13676.8, score=87.4]; TIR domain [PF01582.22, score=23.3]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=162, Expect=4e-42]} {RNA1509_21634} {RNA1310_3928, RNA1509_21634} {RNA1509_21634, RNA815_4298}

Berezikov Lab - 2020-2021 © ERIBA