TomoSeq data search

Data search

Results for MligTC455_22976

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22976

1959

40.80

Mlig455_016649, Mlig455_016713

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.011/0.01658

B9D1

Mlig455_016649 {REF} {Length: 1204} {TRANSSPLICED} {Pfam: Ciliary basal body-associated, B9 protein [PF07162.13, score=129.8]} {Human: ENSG00000108641, B9D1, B9 domain containing 1, [RH, Score=196, Expect=3e-63]} {Mouse: ENSMUSG00000001039, B9d1, B9 protein domain 1, [RH, Score=196, Expect=2e-63]} {Dmel: FBgn0038342, B9d1, [Score=101, Expect=2e-26]} {Smed: dd_Smed_v6_5678_0_1, dd_Smed_v6_5678_0_1, [RH, Score=193, Expect=5e-63]} {RNA1509_14861, RNA1509_42818} {RNA1310_24963, RNA1509_14861, RNA1509_42818} {RNA1509_14861, RNA1509_42818, RNA815_11113.1}

Mlig455_016713 {REF} {Length: 1182} {TRANSSPLICED} {Pfam: Ciliary basal body-associated, B9 protein [PF07162.13, score=129.8]} {Human: ENSG00000108641, B9D1, B9 domain containing 1, [RH, Score=196, Expect=3e-63]} {Mouse: ENSMUSG00000001039, B9d1, B9 protein domain 1, [RH, Score=196, Expect=2e-63]} {Dmel: FBgn0038342, B9d1, [Score=101, Expect=2e-26]} {Smed: dd_Smed_v6_5678_0_1, dd_Smed_v6_5678_0_1, [RH, Score=193, Expect=5e-63]} {RNA1509_14861} {RNA1310_24963} {RNA815_11113.1}

Cumulative graph for MligTC455_22976

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.235	5.526	0.73662	1.00000
RegionR2	-0.149	5.526	0.61719	0.96275
RegionR3	0.001	5.526	0.99601	1.00000
RegionR4	1.011	5.526	0.00181	0.01658
RegionR5	-0.368	5.526	0.16036	0.42155
RegionR6	-0.188	5.526	0.48809	1.00000
RegionR7	-0.056	5.526	0.87111	1.00000
RegionR8	-0.487	5.526	0.29597	0.92520

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.697	5.526	0.12843	0.86112
RegenerationR2	0.377	5.526	0.13668	0.56441
RegenerationR3	0.265	5.526	0.35385	0.77276
RegenerationR4	0.301	5.526	0.31808	0.75655
RegenerationR5	0.485	5.526	0.09244	0.46588
RegenerationR6	0.185	5.526	0.53894	0.83247
RegenerationBL	0.828	5.526	0.00782	0.08657
RegenerationTP	0.564	5.526	0.12541	0.53586

Genes with expression patterns similar to MligTC455_22976

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22976	1959	40.8	Mlig455_016649, Mlig455_016713	Neo: - Age: Down-Up-Up Region-enriched R4: 1.011/0.01658	B9D1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016649 {REF} {Length: 1204} {TRANSSPLICED} {Pfam: Ciliary basal body-associated, B9 protein [PF07162.13, score=129.8]} {Human: ENSG00000108641, B9D1, B9 domain containing 1, [RH, Score=196, Expect=3e-63]} {Mouse: ENSMUSG00000001039, B9d1, B9 protein domain 1, [RH, Score=196, Expect=2e-63]} {Dmel: FBgn0038342, B9d1, [Score=101, Expect=2e-26]} {Smed: dd_Smed_v6_5678_0_1, dd_Smed_v6_5678_0_1, [RH, Score=193, Expect=5e-63]} {RNA1509_14861, RNA1509_42818} {RNA1310_24963, RNA1509_14861, RNA1509_42818} {RNA1509_14861, RNA1509_42818, RNA815_11113.1} Mlig455_016713 {REF} {Length: 1182} {TRANSSPLICED} {Pfam: Ciliary basal body-associated, B9 protein [PF07162.13, score=129.8]} {Human: ENSG00000108641, B9D1, B9 domain containing 1, [RH, Score=196, Expect=3e-63]} {Mouse: ENSMUSG00000001039, B9d1, B9 protein domain 1, [RH, Score=196, Expect=2e-63]} {Dmel: FBgn0038342, B9d1, [Score=101, Expect=2e-26]} {Smed: dd_Smed_v6_5678_0_1, dd_Smed_v6_5678_0_1, [RH, Score=193, Expect=5e-63]} {RNA1509_14861} {RNA1310_24963} {RNA815_11113.1}
2.	MligTC455_41776	767	15.97	Mlig455_049379	Neo: - Age: -	IQCB1	2.498	-	-	-	0.967	0.738	0.793	Mlig455_049379 {REF} {Length: 2348} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=30.0]} {Human: ENSG00000173226, IQCB1, IQ motif containing B1, [RH, Score=202, Expect=2e-56]} {Mouse: ENSMUSG00000022837, Iqcb1, IQ calmodulin-binding motif containing 1, [RH, Score=220, Expect=3e-63]} {Smed: dd_Smed_v6_11329_0_1, dd_Smed_v6_11329_0_1, [RH, Score=233, Expect=4e-68]} {RNA1509_36269, RNA1509_8893} {RNA1310_11108.1, RNA1509_36269, RNA1509_8893} {RNA1509_36269, RNA1509_8893, RNA815_4095.1}
3.	MligTC455_38447	1215	25.32	Mlig455_064649	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.231		1.828	-	-	-	0.956	-	0.872	Mlig455_064649 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=27.3]} {Dmel: FBgn0263353, CG11000, [Score=61.6, Expect=2e-10]} {Celegans: WBGene00009534, F38B7.3, [Score=69.3, Expect=9e-13]} {Smed: dd_Smed_v6_4018_0_1, dd_Smed_v6_4018_0_1, [Score=100, Expect=9e-24]} {RNA1509_10365} {RNA1310_20310} {RNA815_26365}
4.	MligTC455_43175	1395	29.07	Mlig455_031201	Neo: - Age: logFC(26M/2M)=-0.710	CAPN5	1.786	-	-	-	0.956	-	0.830	Mlig455_031201 {REF} {Length: 2222} {Pfam: Calpain family cysteine protease [PF00648.23, score=181.2]} {Human: ENSG00000149260, CAPN5, calpain 5, [Score=190, Expect=5e-52]; ENSG00000203697, CAPN8, calpain 8, [Score=182, Expect=6e-49]} {Mouse: ENSMUSG00000035547, Capn5, calpain 5, [Score=187, Expect=6e-51]; ENSMUSG00000038599, Capn8, calpain 8, [Score=186, Expect=3e-50]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=179, Expect=9e-49]} {Celegans: WBGene00000545, clp-4, CaLPain family, [Score=171, Expect=2e-45]} {Smed: dd_Smed_v6_1971_0_3, dd_Smed_v6_1971_0_3, [Score=166, Expect=1e-43]} {RNA1509_5906} {RNA1310_10573, RNA1509_5906} {RNA1509_5906, RNA815_3643}
5.	MligTC455_43176	1391	28.98	Mlig455_031202	Neo: - Age: -		1.786	-	-	-	0.958	-	0.828	Mlig455_031202 {REF} {Length: 1602} {tRNA: Val(CAC),pseudo, score=27.7} {RNA1509_5906} {RNA1310_10573} {RNA815_3643}
6.	MligTC455_41703	852	17.76	Mlig455_059876	Neo: - Age: -	CYP2U1	1.76	-	-	-	0.952	-	0.808	Mlig455_059876 {REF} {Length: 2192} {Pfam: Cytochrome P450 [PF00067.24, score=211.8]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=176, Expect=9e-53]} {Mouse: ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=171, Expect=6e-49]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=171, Expect=6e-49]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=165, Expect=4e-47]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=118, Expect=1e-29]} {Celegans: WBGene00018261, cyp-33C5, CYtochrome P450 family, [Score=148, Expect=1e-41]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=187, Expect=9e-56]} {RNA1509_33907, RNA1509_36811, RNA1509_44189} {RNA1310_1872.1, RNA1509_33907, RNA1509_36811, RNA1509_44189} {RNA1509_33907, RNA1509_36811, RNA1509_44189, RNA815_585.1}
7.	MligTC455_09316	1719	35.82	Mlig455_046292	Neo: - Age: logFC(26M/2M)=-0.545		1.7	-	-	0.980	-	-	0.720	Mlig455_046292 {REF} {Length: 3745} {RNA1509_18294, RNA1509_44434, RNA1509_44877} {RNA1310_25423.1, RNA1509_18294, RNA1509_44434} {RNA1509_18294, RNA1509_44434, RNA815_162}
8.	MligTC455_49143	772	16.08	Mlig455_021704	Neo: - Age: - Region-enriched R2: 1.427/0.03420		1.7	-	-	-	0.967	-	0.733	Mlig455_021704 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=48.8]} {Smed: dd_Smed_v6_13233_0_2, dd_Smed_v6_13233_0_2, [Score=60.1, Expect=4e-09]} {RNA1509_11962} {RNA1310_8951.1, RNA1509_11962}
9.	MligTC455_19820	624	13	Mlig455_009751, Mlig455_070105	Neo: - Age: -	PP2D1	0.973	-	-	-	0.973	-	-	Mlig455_009751 {REF} {Length: 2288} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=31.0]} {Human: ENSG00000183977, PP2D1, protein phosphatase 2C like domain containing 1, [Score=89.4, Expect=6e-18]} {Mouse: ENSMUSG00000044957, Pp2d1, protein phosphatase 2C-like domain containing 1, [RH, Score=91.7, Expect=7e-19]} {RNA1509_15379} {RNA1310_7985} {RNA815_20859} Mlig455_070105 {REF} {Length: 2287} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=30.1]} {Human: ENSG00000183977, PP2D1, protein phosphatase 2C like domain containing 1, [Score=89.4, Expect=6e-18]} {Mouse: ENSMUSG00000044957, Pp2d1, protein phosphatase 2C-like domain containing 1, [RH, Score=87.0, Expect=2e-17]} {RNA1509_15379} {RNA1310_7985, RNA1509_15379} {RNA1509_15379, RNA815_20859}
10.	MligTC455_37275	698	14.54	Mlig455_053298	Neo: - Age: - Region-enriched R4: 2.180/0.02051	CEP104	0.968	-	-	-	0.968	-	-	Mlig455_053298 {REF} {Length: 4862} {TRANSSPLICED} {Pfam: UvrB/uvrC motif [PF02151.21, score=29.2]} {Human: ENSG00000116198, CEP104, centrosomal protein 104, [Score=559, Expect=0.0]} {Mouse: ENSMUSG00000039523, Cep104, centrosomal protein 104, [RH, Score=549, Expect=0.0]} {Dmel: FBgn0032800, CG10137, [Score=181, Expect=7e-47]} {Celegans: WBGene00011523, T06D8.2, [RH, Score=84.3, Expect=1e-16]} {Smed: dd_Smed_v6_10228_0_1, dd_Smed_v6_10228_0_1, [Score=595, Expect=0.0]} {RNA1509_3191, RNA1509_8359} {RNA1310_3596.2, RNA1509_8359} {RNA1509_8359, RNA815_945}
11.	MligTC455_07754	1866	38.87	Mlig455_013007, Mlig455_013037	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.474	ANK3, FPGT-TNNI3K	0.957	-	-	-	0.957	-	-	Mlig455_013007 {REF} {Length: 3223} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=109.8]; Ankyrin repeats (many copies) [PF13637.8, score=82.3]; Ankyrin repeats (many copies) [PF13857.8, score=62.3]; Ankyrin repeat [PF13606.8, score=59.9]; Ankyrin repeat [PF00023.32, score=48.2]; DHHC palmitoyltransferase [PF01529.22, score=26.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=80.5, Expect=8e-15]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=79.7, Expect=8e-15]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=71.2, Expect=2e-12]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=69.3, Expect=8e-12]} {Smed: dd_Smed_v6_11895_0_1, dd_Smed_v6_11895_0_1, [Score=147, Expect=2e-37]} {RNA1509_18630, RNA1509_25673, RNA1509_41501} {RNA1310_9503, RNA1509_25673, RNA1509_41501} {RNA1509_25673, RNA1509_41501, RNA815_7486} Mlig455_013037 {REF} {Length: 4204} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.2]; Ankyrin repeats (many copies) [PF13637.8, score=54.3]; Ankyrin repeats (many copies) [PF13857.8, score=45.6]; Ankyrin repeat [PF00023.32, score=38.8]; Ankyrin repeat [PF13606.8, score=34.2]; DHHC palmitoyltransferase [PF01529.22, score=25.2]} {Human: ENSG00000259030, FPGT-TNNI3K, FPGT-TNNI3K readthrough, [Score=84.0, Expect=7e-16]; ENSG00000116783, TNNI3K, TNNI3 interacting kinase, [Score=83.6, Expect=1e-15]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=79.7, Expect=9e-15]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=61.6, Expect=4e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=60.5, Expect=6e-09]} {Smed: dd_Smed_v6_11895_0_1, dd_Smed_v6_11895_0_1, [Score=120, Expect=3e-28]} {RNA1509_18630} {RNA1310_9503} {RNA815_7486}
12.	MligTC455_44445	3546	73.87	Mlig455_057077	Neo: - Age: logFC(26M/2M)=-0.194	RSPH14	0.957	-	-	-	0.957	-	-	Mlig455_057077 {REF} {Length: 2215} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=49.1]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=45.3]; HEAT repeats [PF13646.8, score=44.9]; HEAT repeat [PF02985.24, score=40.1]; HEAT-like repeat [PF13513.8, score=38.6]; Adaptin N terminal region [PF01602.22, score=25.3]; Armadillo-like [PF04826.15, score=23.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=19.6]; TAF6 C-terminal HEAT repeat domain [PF07571.15, score=18.8]; Dos2-interacting transcription regulator of RNA-Pol-II [PF14500.8, score=18.2]} {Human: ENSG00000100218, RSPH14, radial spoke head 14 homolog, [RH, Score=224, Expect=3e-70]} {Mouse: ENSMUSG00000009070, Rsph14, radial spoke head homolog 14 (Chlamydomonas), [RH, Score=298, Expect=4e-99]} {Smed: dd_Smed_v6_1917_0_1, dd_Smed_v6_1917_0_1, [RH, Score=317, Expect=2e-107]} {RNA1509_3519} {RNA1310_27336, RNA1509_3519} {RNA1509_3519, RNA815_10090}

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