Data search


search
Exact
Search

Results for MligTC455_22989

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22989 789 16.44 Mlig455_027085

Neo: -

Age: -

NWD1 Mlig455_027085 {REF} {Length: 7314} {Pfam: AAA ATPase domain [PF13191.8, score=27.4]; ATPase domain predominantly from Archaea [PF01637.20, score=25.3]; NACHT domain [PF05729.14, score=22.3]; NB-ARC domain [PF00931.24, score=17.8]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=108, Expect=4e-23]; ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=105, Expect=3e-22]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=115, Expect=2e-25]; ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=110, Expect=7e-24]} {Dmel: FBgn0038397, CG10185, [Score=140, Expect=3e-33]} {Celegans: WBGene00020254, T05C3.2, [Score=154, Expect=1e-37]} {Smed: dd_Smed_v6_9023_0_1, dd_Smed_v6_9023_0_1, [Score=249, Expect=2e-67]} {RNA1509_13337} {RNA1310_3267.1} {RNA815_172.1}

Cumulative graph for MligTC455_22989

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.793 4.349 0.50990 1.00000
RegionR2 0.074 4.349 0.88006 1.00000
RegionR3 0.513 4.349 0.19447 0.73234
RegionR4 0.58 4.349 0.19443 0.47211
RegionR5 0.03 4.349 0.93521 1.00000
RegionR6 0.233 4.349 0.57301 1.00000
RegionR7 0.671 4.349 0.17881 0.77460
RegionR8 -1.308 4.349 0.14158 0.68647

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.073 4.349 0.34431 1.00000
RegenerationR2 0.477 4.349 0.21280 0.65996
RegenerationR3 -0.07 4.349 0.86331 1.00000
RegenerationR4 -0.427 4.349 0.31898 0.75718
RegenerationR5 0.268 4.349 0.50954 0.86389
RegenerationR6 0.23 4.349 0.58902 0.86311
RegenerationBL 0.551 4.349 0.28979 0.65181
RegenerationTP 0.493 4.349 0.44139 0.86096


Genes with expression patterns similar to MligTC455_22989

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22989 789 16.44 Mlig455_027085

Neo: -

Age: -

NWD1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_027085 {REF} {Length: 7314} {Pfam: AAA ATPase domain [PF13191.8, score=27.4]; ATPase domain predominantly from Archaea [PF01637.20, score=25.3]; NACHT domain [PF05729.14, score=22.3]; NB-ARC domain [PF00931.24, score=17.8]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=108, Expect=4e-23]; ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=105, Expect=3e-22]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=115, Expect=2e-25]; ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=110, Expect=7e-24]} {Dmel: FBgn0038397, CG10185, [Score=140, Expect=3e-33]} {Celegans: WBGene00020254, T05C3.2, [Score=154, Expect=1e-37]} {Smed: dd_Smed_v6_9023_0_1, dd_Smed_v6_9023_0_1, [Score=249, Expect=2e-67]} {RNA1509_13337} {RNA1310_3267.1} {RNA815_172.1}
2. MligTC455_22988 1969 41.02 Mlig455_026928, Mlig455_026935

Neo: -

Age: logFC(26M/2M)=-0.236

NWD1 3.592 - 0.870 0.965 0.760 0.997 -

Mlig455_026928 {REF} {Length: 7616} {Pfam: AAA ATPase domain [PF13191.8, score=39.1]; NACHT domain [PF05729.14, score=33.1]; ATPase domain predominantly from Archaea [PF01637.20, score=23.8]; AAA domain [PF13401.8, score=23.4]; NB-ARC domain [PF00931.24, score=18.8]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=228, Expect=1e-59]; ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=224, Expect=6e-58]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=225, Expect=1e-58]; ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=218, Expect=3e-56]} {Dmel: FBgn0038397, CG10185, [Score=295, Expect=3e-80]} {Celegans: WBGene00020254, T05C3.2, [Score=305, Expect=2e-83]} {Smed: dd_Smed_v6_9023_0_1, dd_Smed_v6_9023_0_1, [RH, Score=424, Expect=8e-121]} {RNA1509_16134, RNA1509_3540} {RNA1310_508.1, RNA1509_16134, RNA1509_3540} {RNA1509_16134, RNA1509_3540, RNA815_172.1}

Mlig455_026935 {REF} {Length: 7273} {Pfam: AAA ATPase domain [PF13191.8, score=40.5]; NACHT domain [PF05729.14, score=33.2]; ATPase domain predominantly from Archaea [PF01637.20, score=23.8]; AAA domain [PF13401.8, score=23.4]; NB-ARC domain [PF00931.24, score=18.8]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=227, Expect=3e-59]; ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=221, Expect=5e-57]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=223, Expect=8e-58]; ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=218, Expect=2e-56]} {Dmel: FBgn0038397, CG10185, [Score=295, Expect=4e-80]} {Celegans: WBGene00020254, T05C3.2, [Score=304, Expect=4e-83]} {Smed: dd_Smed_v6_9023_0_1, dd_Smed_v6_9023_0_1, [RH, Score=419, Expect=3e-119]} {RNA1509_3540} {RNA1310_508.1} {RNA815_172.1}
3. MligTC455_22990 1087 22.65 Mlig455_027023

Neo: -

Age: Down-Down-Down

NWD1 2.601 - 0.700 0.913 - 0.988 - Mlig455_027023 {REF} {Length: 6900} {Pfam: AAA ATPase domain [PF13191.8, score=39.1]; NACHT domain [PF05729.14, score=33.1]; ATPase domain predominantly from Archaea [PF01637.20, score=23.8]; AAA domain [PF13401.8, score=23.4]; NB-ARC domain [PF00931.24, score=18.8]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=228, Expect=1e-59]; ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=224, Expect=6e-58]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=225, Expect=1e-58]; ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=218, Expect=3e-56]} {Dmel: FBgn0038397, CG10185, [Score=295, Expect=3e-80]} {Celegans: WBGene00020254, T05C3.2, [Score=305, Expect=2e-83]} {Smed: dd_Smed_v6_9023_0_1, dd_Smed_v6_9023_0_1, [RH, Score=424, Expect=8e-121]} {RNA1509_13337} {RNA1310_508.1} {RNA815_172.1}
4. MligTC455_45809 600 12.5 Mlig455_067476

Neo: -

Age: Down-Up-Down

GNB1 1.824 - - 0.865 - 0.959 - Mlig455_067476 {REF} {Length: 2452} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.6]} {Human: ENSG00000078369, GNB1, G protein subunit beta 1, [Score=339, Expect=2e-115]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=339, Expect=2e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=338, Expect=4e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=327, Expect=1e-110]} {Mouse: ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=339, Expect=1e-115]; ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=339, Expect=1e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=328, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=325, Expect=3e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=350, Expect=5e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=2e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=378, Expect=4e-131]} {RNA1509_43184, RNA1509_4807} {RNA1310_7323, RNA1509_43184} {RNA1509_43184, RNA815_2947}
5. MligTC455_44710 1043 21.73 Mlig455_059157, Mlig455_065533

Neo: -

Age: Down-Up-Down

CAPN9 1.724 - - 0.774 - 0.950 -

Mlig455_059157 {REF} {Length: 4269} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=343.7]; Calpain large subunit, domain III [PF01067.24, score=126.9]; EF hand [PF00036.34, score=25.4]; EF-hand domain [PF13405.8, score=25.2]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=452, Expect=1e-146]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=446, Expect=5e-144]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=457, Expect=7e-146]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=365, Expect=5e-113]} {Smed: dd_Smed_v6_4499_0_1, dd_Smed_v6_4499_0_1, [RH, Score=491, Expect=8e-160]} {RNA1509_11645} {RNA1310_4797.1} {RNA815_16849}

Mlig455_065533 {REF} {Length: 3264} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=340.7]; Calpain large subunit, domain III [PF01067.24, score=129.6]; EF-hand domain [PF13405.8, score=27.7]; EF hand [PF00036.34, score=27.3]; EF-hand domain pair [PF13499.8, score=20.5]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=460, Expect=1e-152]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=455, Expect=7e-151]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=449, Expect=1e-145]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=363, Expect=2e-115]} {Smed: dd_Smed_v6_4499_0_1, dd_Smed_v6_4499_0_1, [RH, Score=492, Expect=2e-163]} {RNA1509_11645} {RNA1310_4797.1, RNA1509_11645} {RNA1509_11645, RNA815_16849}
6. MligTC455_43106 1333 27.77 Mlig455_007463

Neo: -

Age: -

SLC39A9 1.705 - - 0.957 0.748 - - Mlig455_007463 {REF} {Length: 4070} {Pfam: ZIP Zinc transporter [PF02535.24, score=115.7]} {Human: ENSG00000029364, SLC39A9, solute carrier family 39 member 9, [Score=293, Expect=2e-97]} {Mouse: ENSMUSG00000048833, Slc39a9, solute carrier family 39 (zinc transporter), member 9, [Score=270, Expect=1e-88]} {Dmel: FBgn0039902, Zip102B, Zinc/iron regulated transporter-related protein 102B, [Score=216, Expect=7e-68]} {Celegans: WBGene00011329, zipt-9, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [RH, Score=244, Expect=8e-78]} {Smed: dd_Smed_v6_6946_0_1, dd_Smed_v6_6946_0_1, [RH, Score=292, Expect=8e-97]} {RNA1509_18192, RNA1509_34790} {RNA1310_37072, RNA1509_18192, RNA1509_34790} {RNA1509_18192, RNA1509_34790, RNA815_20206}
7. MligTC455_38636 879 18.3 Mlig455_015502

Neo: -

Age: Down-Up-Down

GLS 1.665 - - 0.709 - 0.956 - Mlig455_015502 {REF} {Length: 2629} {Pfam: Glutaminase [PF04960.17, score=370.4]; EF-hand domain [PF17959.3, score=64.1]; Ankyrin repeats (many copies) [PF13637.8, score=41.7]; Ankyrin repeats (3 copies) [PF12796.9, score=39.9]; Ankyrin repeats (many copies) [PF13857.8, score=28.6]; Ankyrin repeat [PF13606.8, score=27.6]; Ankyrin repeat [PF00023.32, score=21.8]} {Human: ENSG00000115419, GLS, glutaminase, [RH, Score=577, Expect=0.0]; ENSG00000135423, GLS2, glutaminase 2, [RH, Score=576, Expect=0.0]} {Mouse: ENSMUSG00000026103, Gls, glutaminase, [RH, Score=579, Expect=0.0]; ENSMUSG00000044005, Gls2, glutaminase 2 (liver, mitochondrial), [RH, Score=576, Expect=0.0]} {Dmel: FBgn0261625, GLS, Glutaminase, [Score=570, Expect=0.0]} {Celegans: WBGene00008435, glna-2, Putative glutaminase 2, [Score=518, Expect=4e-178]} {Smed: dd_Smed_v6_15097_0_1, dd_Smed_v6_15097_0_1, [Score=452, Expect=2e-154]} {RNA1509_17301, RNA1509_32879, RNA1509_50826, RNA1509_5226} {RNA1310_9764.1, RNA1509_17301, RNA1509_32879, RNA1509_50826} {RNA1509_17301, RNA1509_32879, RNA1509_50826, RNA815_4546}
8. MligTC455_34770 809 16.85 Mlig455_022329

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.598

TNK2 0.972 - - - - 0.972 - Mlig455_022329 {REF} {Length: 2001} {Pfam: UBA-like domain [PF14555.8, score=22.4]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=68.2, Expect=3e-12]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=68.6, Expect=2e-12]} {Smed: dd_Smed_v6_6522_0_1, dd_Smed_v6_6522_0_1, [RH, Score=49.3, Expect=1e-06]} {RNA1509_17347} {RNA1310_12226.1} {RNA815_13899.1}
9. MligTC455_23273 822 17.13 Mlig455_030307

Neo: -

Age: logFC(26M/2M)=0.593

0.969 - - - - 0.969 - Mlig455_030307 {REF} {Length: 2803} {NoTransDecoderORF} {RNA1509_18671} {RNA1310_47286.1} {RNA815_18687.1}
10. MligTC455_23274 829 17.27 Mlig455_034146

Neo: -

Age: Up-Down-Up

GBF1 0.968 - - - - 0.968 - Mlig455_034146 {REF} {Length: 9172} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=214.6]; Guanine nucleotide exchange factor in Golgi transport N-terminal [PF12783.9, score=73.7]} {Human: ENSG00000107862, GBF1, golgi brefeldin A resistant guanine nucleotide exchange factor 1, [Score=1199, Expect=0.0]} {Mouse: ENSMUSG00000025224, Gbf1, golgi-specific brefeldin A-resistance factor 1, [RH, Score=1204, Expect=0.0]} {Dmel: FBgn0264560, garz, gartenzwerg, [RH, Score=1029, Expect=0.0]} {Celegans: WBGene00007703, gbf-1, [Score=873, Expect=0.0]} {Smed: dd_Smed_v6_8011_0_2, dd_Smed_v6_8011_0_2, [Score=850, Expect=0.0]} {RNA1509_5663} {RNA1310_634, RNA1509_5663} {RNA1509_5663, RNA815_524}
11. MligTC455_25918 510 10.62 Mlig455_006533, Mlig455_006699

Neo: -

Age: Down-Up-Down

0.96 - - - - 0.960 -

Mlig455_006533 {REF} {Length: 3296} {Pfam: NHL repeat [PF01436.23, score=26.2]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=1e-06]} {RNA1509_12380} {RNA1310_21840.1} {RNA815_17174}

Mlig455_006699 {REF} {Length: 658} {NoTransDecoderORF} {RNA1509_42918} {RNA1310_29427} {RNA815_19755}
12. MligTC455_20555 325 6.77 Mlig455_035815

Neo: -

Age: -

LRRC56 0.953 - - - - 0.953 - Mlig455_035815 {REF} {Length: 3489} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=35.1]; Leucine rich repeat [PF13855.8, score=30.0]; Leucine-rich repeat [PF14580.8, score=26.7]} {Human: ENSG00000161328, LRRC56, leucine rich repeat containing 56, [RH, Score=222, Expect=2e-64]; ENSG00000273831, LRRC56, leucine rich repeat containing 56, [RH, Score=221, Expect=6e-64]} {Mouse: ENSMUSG00000038637, Lrrc56, leucine rich repeat containing 56, [RH, Score=202, Expect=2e-58]} {Dmel: FBgn0035497, CG14995, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_10834_0_1, dd_Smed_v6_10834_0_1, [RH, Score=334, Expect=3e-107]} {RNA1509_10058} {RNA1310_11542} {RNA815_9595}
13. MligTC455_51341 572 11.91 Mlig455_031577

Neo: -

Age: Down-Up-Down

DYRK1B 0.952 - - - - 0.952 - Mlig455_031577 {REF} {Length: 4639} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=173.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=82.6]} {Human: ENSG00000281320, DYRK1B, dual specificity tyrosine phosphorylation regulated kinase 1B, [RH, Score=548, Expect=0.0]; ENSG00000105204, DYRK1B, dual specificity tyrosine phosphorylation regulated kinase 1B, [RH, Score=548, Expect=0.0]} {Mouse: ENSMUSG00000002409, Dyrk1b, dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b, [RH, Score=550, Expect=0.0]} {Dmel: FBgn0259168, mnb, minibrain, [RH, Score=555, Expect=0.0]} {Celegans: WBGene00003149, mbk-1, Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1, [RH, Score=477, Expect=1e-155]} {Smed: dd_Smed_v6_3773_0_1, dd_Smed_v6_3773_0_1, [RH, Score=464, Expect=7e-148]} {RNA1509_5357} {RNA1310_1355.1} {RNA815_1613.1}
14. MligTC455_52157 833 17.35 Mlig455_043477

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.340

Region-enriched R4: 1.399/0.00786

0.951 - - - - 0.951 - Mlig455_043477 {REF} {Length: 2916} {Pfam: Coiled-coil region of CCDC155 or KASH [PF14662.8, score=27.5]; CCDC144C protein coiled-coil region [PF14915.8, score=17.9]} {Smed: dd_Smed_v6_11072_0_1, dd_Smed_v6_11072_0_1, [RH, Score=243, Expect=1e-74]} {RNA1509_23869, RNA1509_39284, RNA1509_5021} {RNA1310_8542.1, RNA1509_23869, RNA1509_39284, RNA1509_5021} {RNA1509_23869, RNA1509_39284, RNA1509_5021, RNA815_2850.1}
15. MligTC455_20027 1159 24.14 Mlig455_007217, Mlig455_007451

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.831

GCLM 0.95 - - - - 0.950 -

Mlig455_007217 {REF} {Length: 2261} {Human: ENSG00000023909, GCLM, glutamate-cysteine ligase modifier subunit, [RH, Score=120, Expect=7e-32]} {Mouse: ENSMUSG00000028124, Gclm, glutamate-cysteine ligase, modifier subunit, [RH, Score=120, Expect=3e-32]} {Dmel: FBgn0046114, Gclm, Glutamate-cysteine ligase modifier subunit, [Score=78.6, Expect=9e-17]} {Celegans: WBGene00017084, E01A2.1, [RH, Score=78.6, Expect=8e-17]} {Smed: dd_Smed_v6_487_0_1, dd_Smed_v6_487_0_1, [Score=107, Expect=9e-28]} {RNA1509_2089} {RNA1310_10444.1} {RNA815_4215}

Mlig455_007451 {REF} {Length: 2259} {Human: ENSG00000023909, GCLM, glutamate-cysteine ligase modifier subunit, [RH, Score=120, Expect=7e-32]} {Mouse: ENSMUSG00000028124, Gclm, glutamate-cysteine ligase, modifier subunit, [RH, Score=120, Expect=3e-32]} {Dmel: FBgn0046114, Gclm, Glutamate-cysteine ligase modifier subunit, [Score=78.6, Expect=9e-17]} {Celegans: WBGene00017084, E01A2.1, [RH, Score=78.6, Expect=8e-17]} {Smed: dd_Smed_v6_487_0_1, dd_Smed_v6_487_0_1, [Score=107, Expect=9e-28]} {RNA1509_2089} {RNA1310_10444.1} {RNA815_4215}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA