TomoSeq data search

Data search

Results for MligTC455_23044

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23044

235

4.89

Mlig455_016076

Neo: -

Age: -

Region-enriched R2: 2.515/0.01519

AP1B1

Mlig455_016076 {REF} {Length: 4752} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=427.7]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=202.0]; Beta2-adaptin appendage, C-terminal sub-domain [PF09066.12, score=91.4]; HEAT repeats [PF13646.8, score=56.7]; Adaptin C-terminal domain [PF02883.22, score=42.2]; HEAT repeat [PF02985.24, score=40.6]; Armadillo/beta-catenin-like repeat [PF00514.25, score=25.8]; Nuclear condensing complex subunits, C-term domain [PF12719.9, score=25.6]; CLASP N terminal [PF12348.10, score=21.6]} {Human: ENSG00000100280, AP1B1, adaptor related protein complex 1 subunit beta 1, [Score=1133, Expect=0.0]; ENSG00000006125, AP2B1, adaptor related protein complex 2 subunit beta 1, [Score=1121, Expect=0.0]} {Mouse: ENSMUSG00000009090, Ap1b1, adaptor protein complex AP-1, beta 1 subunit, [Score=1123, Expect=0.0]; ENSMUSG00000035152, Ap2b1, adaptor-related protein complex 2, beta 1 subunit, [Score=1120, Expect=0.0]} {Dmel: FBgn0010380, AP-1-2beta, Adaptor Protein complex 1/2, beta subunit, [Score=1136, Expect=0.0]} {Celegans: WBGene00000160, apb-1, AP complex subunit beta, [Score=1040, Expect=0.0]} {Smed: dd_Smed_v6_893_0_1, dd_Smed_v6_893_0_1, [Score=1157, Expect=0.0]} {RNA1509_31099, RNA1509_35853, RNA1509_5198} {RNA1310_4499, RNA1509_31099, RNA1509_35853, RNA1509_5198} {RNA1509_31099, RNA1509_35853, RNA1509_5198, RNA815_8898}

Cumulative graph for MligTC455_23044

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.009	2.814	0.09103	0.64871
RegionR2	2.515	2.814	0.00060	0.01519
RegionR3	0.244	2.814	0.66976	1.00000
RegionR4	-1.868	2.814	0.02214	0.10968
RegionR5	-0.342	2.814	0.53949	0.90260
RegionR6	0.188	2.814	0.75854	1.00000
RegionR7	0.965	2.814	0.20027	0.80811
RegionR8	1.308	2.814	0.14118	0.68557

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.361	2.814	0.78978	1.00000
RegenerationR2	-0.991	2.814	0.14426	0.57590
RegenerationR3	0.99	2.814	0.16555	0.59968
RegenerationR4	-0.069	2.814	0.92785	1.00000
RegenerationR5	0.117	2.814	0.83074	0.99781
RegenerationR6	-0.285	2.814	0.74032	0.94730
RegenerationBL	1.389	2.814	0.07981	0.32998
RegenerationTP	1.3	2.814	0.10537	0.50250

Genes with expression patterns similar to MligTC455_23044

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23044	235	4.89	Mlig455_016076	Neo: - Age: - Region-enriched R2: 2.515/0.01519	AP1B1	5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_016076 {REF} {Length: 4752} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=427.7]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=202.0]; Beta2-adaptin appendage, C-terminal sub-domain [PF09066.12, score=91.4]; HEAT repeats [PF13646.8, score=56.7]; Adaptin C-terminal domain [PF02883.22, score=42.2]; HEAT repeat [PF02985.24, score=40.6]; Armadillo/beta-catenin-like repeat [PF00514.25, score=25.8]; Nuclear condensing complex subunits, C-term domain [PF12719.9, score=25.6]; CLASP N terminal [PF12348.10, score=21.6]} {Human: ENSG00000100280, AP1B1, adaptor related protein complex 1 subunit beta 1, [Score=1133, Expect=0.0]; ENSG00000006125, AP2B1, adaptor related protein complex 2 subunit beta 1, [Score=1121, Expect=0.0]} {Mouse: ENSMUSG00000009090, Ap1b1, adaptor protein complex AP-1, beta 1 subunit, [Score=1123, Expect=0.0]; ENSMUSG00000035152, Ap2b1, adaptor-related protein complex 2, beta 1 subunit, [Score=1120, Expect=0.0]} {Dmel: FBgn0010380, AP-1-2beta, Adaptor Protein complex 1/2, beta subunit, [Score=1136, Expect=0.0]} {Celegans: WBGene00000160, apb-1, AP complex subunit beta, [Score=1040, Expect=0.0]} {Smed: dd_Smed_v6_893_0_1, dd_Smed_v6_893_0_1, [Score=1157, Expect=0.0]} {RNA1509_31099, RNA1509_35853, RNA1509_5198} {RNA1310_4499, RNA1509_31099, RNA1509_35853, RNA1509_5198} {RNA1509_31099, RNA1509_35853, RNA1509_5198, RNA815_8898}
2.	MligTC455_38938	480	10.01	Mlig455_061217	Neo: Int S/G2/M Age: - Regeneration-enriched BL: 3.127 Regeneration-enriched R6: 2.646 Regeneration-enriched R3: 2.454	CFL1	0.971	-	-	0.971	-	-	-	Mlig455_061217 {REF} {Length: 2312} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=128.2]} {Human: ENSG00000172757, CFL1, cofilin 1, [RH, Score=82.8, Expect=2e-20]} {Mouse: ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [RH, Score=82.0, Expect=3e-20]; ENSMUSG00000062929, Cfl2, cofilin 2, muscle, [RH, Score=81.6, Expect=4e-20]} {Dmel: FBgn0011726, tsr, twinstar, [Score=99.0, Expect=3e-27]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [RH, Score=85.9, Expect=4e-22]} {Smed: dd_Smed_v6_112_0_1, dd_Smed_v6_112_0_1, [RH, Score=79.3, Expect=6e-20]} {RNA1509_30869} {RNA1310_27632} {RNA815_16369.1}
3.	MligTC455_11223	22	0.45	Mlig455_013061	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_013061 {REF} {Length: 779} {RNA1310_148012} {RNA815_27868}
4.	MligTC455_49780	780	16.24	Mlig455_053889	Neo: - Age: Down-Up-Down	TAX1BP3	0.964	-	-	-	-	0.964	-	Mlig455_053889 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=47.9]; PDZ domain [PF17820.3, score=42.3]; PDZ domain [PF13180.8, score=29.5]} {Human: ENSG00000213977, TAX1BP3, Tax1 binding protein 3, [RH, Score=69.7, Expect=1e-15]} {Mouse: ENSMUSG00000040158, Tax1bp3, Tax1 (human T cell leukemia virus type I) binding protein 3, [RH, Score=69.7, Expect=9e-16]} {Dmel: FBgn0035148, CG3402, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00016678, C45G9.7, [RH, Score=92.0, Expect=1e-24]} {Smed: dd_Smed_v6_7732_0_1, dd_Smed_v6_7732_0_1, [Score=47.8, Expect=4e-07]} {RNA1509_46994, RNA1509_56445} {RNA1310_49427.1, RNA1509_56445} {RNA1509_56445, RNA815_26268.2}
5.	MligTC455_22230	170	3.54	Mlig455_013703, Mlig455_013720	Neo: - Age: Down-Up-Down Region-enriched R8: 5.137/0.00004 Region-enriched R7: 5.134/0.00000 Region-enriched R6: 3.126/0.00746		0.961	-	-	-	-	0.961	-	Mlig455_013703 {REF} {Length: 2025} {RNA1509_49155} {RNA1310_23836, RNA1509_49155} {RNA1509_49155, RNA815_28676} Mlig455_013720 {REF} {Length: 2031} {RNA1509_49155} {RNA1310_23836} {RNA815_28676}
6.	MligTC455_30499	19719	410.82	Mlig455_003842, Mlig455_010700, Mlig455_018457	Neo: - Age: Down-Up-Up	DYNLL2	0.96	-	-	-	-	0.960	-	Mlig455_003842 {REF} {Length: 3402} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=101.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.7]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=209, Expect=2e-61]} {RNA1509_9730} {RNA1310_76531} {RNA815_10425} Mlig455_010700 {REF} {Length: 707} {NoTransDecoderORF} {RNA1310_58697} Mlig455_018457 {REF} {Length: 917} {Pfam: Dynein light chain type 1 [PF01221.20, score=143.1]} {Human: ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [RH, Score=186, Expect=2e-62]; ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [RH, Score=178, Expect=3e-59]} {Mouse: ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [RH, Score=186, Expect=1e-62]; ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [RH, Score=178, Expect=2e-59]} {Dmel: FBgn0011760, ctp, cut up, [RH, Score=185, Expect=3e-62]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [RH, Score=183, Expect=1e-61]} {Smed: dd_Smed_v6_310_0_1, dd_Smed_v6_310_0_1, [RH, Score=178, Expect=9e-60]} {RNA1509_13705, RNA1509_22357, RNA1509_32358, RNA1509_53940} {RNA1310_19556.1, RNA1509_13705, RNA1509_22357, RNA1509_32358, RNA1509_53940} {RNA1509_13705, RNA1509_22357, RNA1509_32358, RNA1509_53940, RNA815_25859}
7.	MligTC455_49195	123	2.56	Mlig455_063688	Neo: - Age: -	OTUD3	0.959	-	-	-	-	-	0.959	Mlig455_063688 {REF} {Length: 2508} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=44.5]; Peptidase C65 Otubain [PF10275.11, score=30.1]} {Human: ENSG00000169914, OTUD3, OTU deubiquitinase 3, [RH, Score=211, Expect=3e-64]} {Mouse: ENSMUSG00000041161, Otud3, OTU domain containing 3, [RH, Score=207, Expect=9e-63]} {Smed: dd_Smed_v6_7154_0_1, dd_Smed_v6_7154_0_1, [RH, Score=181, Expect=5e-55]} {RNA1509_10142, RNA1509_18442} {RNA1310_8277, RNA1509_10142, RNA1509_18442} {RNA1509_10142, RNA1509_18442, RNA815_6103}
8.	MligTC455_47130	799	16.64	Mlig455_045674	Neo: - Age: Down-Up-Down Region-enriched R8: 3.665/0.00000 Region-enriched R7: 3.245/0.00000	OVOL1	0.957	-	-	-	-	0.957	-	Mlig455_045674 {REF} {Length: 2321} {Pfam: Zinc-finger double domain [PF13465.8, score=53.3]; Zinc finger, C2H2 type [PF00096.28, score=47.1]; C2H2-type zinc finger [PF13894.8, score=35.2]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=172, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=184, Expect=9e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=187, Expect=1e-57]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=183, Expect=3e-56]} {RNA1509_42049} {RNA1310_21041, RNA1509_42049} {RNA1509_42049, RNA815_8487.1}
9.	MligTC455_47410	144	3	Mlig455_066471	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_066471 {REF} {Length: 690} {NoTransDecoderORF} {RNA1509_9488} {RNA1310_3197} {RNA815_3130}
10.	MligTC455_16222	431	8.99	Mlig455_033888, Mlig455_054116	Neo: - Age: logFC(26M/2M)=0.990 Region-enriched R8: 3.408/0.00045 Region-enriched R7: 2.502/0.03357		0.956	-	-	-	-	0.956	-	Mlig455_033888 {REF} {Length: 1217} {RNA1310_29964} {RNA815_15923} Mlig455_054116 {REF} {Length: 1404} {RNA1310_29964} {RNA815_15923}
11.	MligTC455_38310	39	0.81	Mlig455_025151	Neo: - Age: - Regeneration-upregulated BL: 7.131 Regeneration-enriched BL: 7.131		0.954	-	-	-	-	0.954	-	Mlig455_025151 {REF} {Length: 892} {NoTransDecoderORF} {RNA1310_96949}
12.	MligTC455_17604	7861	163.77	Mlig455_002626	Neo: - Age: Down-Up-Down Region-enriched R7: 1.074/0.00125		0.952	-	-	-	-	0.952	-	Mlig455_002626 {REF} {Length: 1596} {Pfam: Dynein light chain type 1 [PF01221.20, score=43.2]; EF hand [PF00036.34, score=34.7]; EF-hand domain [PF13405.8, score=28.0]; EF-hand domain pair [PF13499.8, score=28.0]; EF-hand domain pair [PF13833.8, score=23.2]; EF hand [PF13202.8, score=18.5]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [Score=95.9, Expect=4e-25]} {RNA1509_17645, RNA1509_26138, RNA1509_3074, RNA1509_32651, RNA1509_44371, RNA1509_44909, RNA1509_56578, RNA1509_57982} {RNA1310_31925, RNA1509_17645, RNA1509_26138, RNA1509_3074, RNA1509_32651, RNA1509_44371, RNA1509_44909, RNA1509_56578, RNA1509_57982} {RNA1509_17645, RNA1509_26138, RNA1509_3074, RNA1509_32651, RNA1509_44371, RNA1509_44909, RNA1509_56578, RNA1509_57982, RNA815_17923}
13.	MligTC455_54158	22	0.46	Mlig455_011244	Neo: - Age: Down-Up-Down	PI4K2A	0.951	-	-	-	-	0.951	-	Mlig455_011244 {REF} {Length: 2057} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=176.8]} {Human: ENSG00000155252, PI4K2A, phosphatidylinositol 4-kinase type 2 alpha, [Score=350, Expect=2e-114]; ENSG00000281028, AC104662.2, phosphatidylinositol 4-kinase type 2 beta, [Score=348, Expect=5e-115]} {Mouse: ENSMUSG00000025178, Pi4k2a, phosphatidylinositol 4-kinase type 2 alpha, [Score=352, Expect=4e-115]} {Dmel: FBgn0037339, Pi4KIIalpha, [RH, Score=500, Expect=8e-170]} {Celegans: WBGene00022501, ZC8.6, [RH, Score=414, Expect=7e-138]} {Smed: dd_Smed_v6_10985_0_1, dd_Smed_v6_10985_0_1, [Score=317, Expect=4e-102]} {RNA1509_4690} {RNA1310_13340.1, RNA1509_4690} {RNA1509_4690, RNA815_4434}

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