Data search
Results for MligTC455_23065
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23065 | 467 | 9.73 | Mlig455_025934, Mlig455_025969 | Neo: - Age: - |
TSC1 | Mlig455_025934 {REF} {Length: 3635} {TRANSSPLICED} {Pfam: Hamartin protein [PF04388.14, score=237.8]} {Human: ENSG00000165699, TSC1, TSC complex subunit 1, [RH, Score=134, Expect=2e-31]} {Mouse: ENSMUSG00000026812, Tsc1, tuberous sclerosis 1, [RH, Score=132, Expect=7e-31]} {RNA1509_18574} {RNA1310_3860.1, RNA1509_18574} {RNA1509_18574, RNA815_17835} Mlig455_025969 {REF} {Length: 4143} {TRANSSPLICED} {Pfam: Hamartin protein [PF04388.14, score=235.9]} {Human: ENSG00000165699, TSC1, TSC complex subunit 1, [RH, Score=134, Expect=3e-31]} {Mouse: ENSMUSG00000026812, Tsc1, tuberous sclerosis 1, [RH, Score=132, Expect=8e-31]} {RNA1509_18574} {RNA1310_3860.1} {RNA815_17835} |
Cumulative graph for MligTC455_23065
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.061 | 3.744 | 0.49915 | 1.00000 | |
| RegionR2 | 0.386 | 3.744 | 0.59749 | 0.94888 | |
| RegionR3 | 0.056 | 3.744 | 0.92503 | 1.00000 | |
| RegionR4 | 0.406 | 3.744 | 0.58546 | 0.90112 | |
| RegionR5 | 0.18 | 3.744 | 0.73685 | 1.00000 | |
| RegionR6 | 0.445 | 3.744 | 0.43576 | 0.99696 | |
| RegionR7 | 0.164 | 3.744 | 0.80577 | 1.00000 | |
| RegionR8 | -0.575 | 3.744 | 0.51724 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.68 | 3.744 | 0.29112 | 0.98947 | |
| RegenerationR2 | -0.226 | 3.744 | 0.71244 | 0.96071 | |
| RegenerationR3 | -0.303 | 3.744 | 0.65804 | 0.93249 | |
| RegenerationR4 | -0.508 | 3.744 | 0.49670 | 0.86728 | |
| RegenerationR5 | -0.014 | 3.744 | 0.98347 | 1.00000 | |
| RegenerationR6 | -0.425 | 3.744 | 0.52762 | 0.82522 | |
| RegenerationBL | 0.433 | 3.744 | 0.52052 | 0.88218 | |
| RegenerationTP | -0.699 | 3.744 | 0.41372 | 0.83958 |
Genes with expression patterns similar to MligTC455_23065
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23065 | 467 | 9.73 | Mlig455_025934, Mlig455_025969 | Neo: - Age: - |
TSC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_025934 {REF} {Length: 3635} {TRANSSPLICED} {Pfam: Hamartin protein [PF04388.14, score=237.8]} {Human: ENSG00000165699, TSC1, TSC complex subunit 1, [RH, Score=134, Expect=2e-31]} {Mouse: ENSMUSG00000026812, Tsc1, tuberous sclerosis 1, [RH, Score=132, Expect=7e-31]} {RNA1509_18574} {RNA1310_3860.1, RNA1509_18574} {RNA1509_18574, RNA815_17835} Mlig455_025969 {REF} {Length: 4143} {TRANSSPLICED} {Pfam: Hamartin protein [PF04388.14, score=235.9]} {Human: ENSG00000165699, TSC1, TSC complex subunit 1, [RH, Score=134, Expect=3e-31]} {Mouse: ENSMUSG00000026812, Tsc1, tuberous sclerosis 1, [RH, Score=132, Expect=8e-31]} {RNA1509_18574} {RNA1310_3860.1} {RNA815_17835} |
| 2. | MligTC455_38302 | 1233 | 25.69 | Mlig455_046423, Mlig455_046438, Mlig455_046466 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.356/0.00306 |
1.775 | - | - | - | - | 0.962 | 0.813 | Mlig455_046423 {REF} {Length: 509} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.8]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789} {RNA1310_68484} {RNA815_35591} Mlig455_046438 {REF} {Length: 537} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.0]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789} {RNA1310_68484} {RNA815_35591} Mlig455_046466 {REF} {Length: 538} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.0]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789, RNA1509_41299} {RNA1310_68484, RNA1509_18789, RNA1509_41299} {RNA1509_18789, RNA1509_41299, RNA815_35591} |
|
| 3. | MligTC455_31746 | 252 | 5.24 | Mlig455_020444 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.326/0.00065 |
1.761 | - | - | - | - | 0.956 | 0.805 | Mlig455_020444 {REF} {Length: 917} {RNA1310_39333.1} {RNA815_12620.1} | |
| 4. | MligTC455_20079 | 78 | 1.63 | Mlig455_033388 | Neo: - Age: - |
KLHDC4 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_033388 {REF} {Length: 3341} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13415.8, score=77.7]; Galactose oxidase, central domain [PF13418.8, score=73.9]; Kelch motif [PF13854.8, score=57.1]; Kelch motif [PF13964.8, score=54.0]; Kelch motif [PF01344.27, score=35.5]; Kelch motif [PF07646.17, score=34.4]} {Human: ENSG00000104731, KLHDC4, kelch domain containing 4, [RH, Score=217, Expect=4e-63]} {Mouse: ENSMUSG00000040263, Klhdc4, kelch domain containing 4, [RH, Score=218, Expect=5e-63]} {Dmel: FBgn0036301, CG4069, [RH, Score=239, Expect=6e-72]} {Celegans: WBGene00001827, hcf-1, HCF1 related; Host cell factor 1, [Score=67.4, Expect=1e-11]} {RNA1509_26313} {RNA1310_13537, RNA1509_26313} {RNA1509_26313, RNA815_16814.1} |
| 5. | MligTC455_31014 | 201 | 4.19 | Mlig455_026546 | Neo: Int S/G2/M Age: Up-Down-Down |
PRR9 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_026546 {REF} {Length: 1557} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=1e-06]} {RNA1509_25089} {RNA1310_3745} {RNA815_38208.1} |
| 6. | MligTC455_10545 | 1083 | 22.57 | Mlig455_061540 | Neo: - Age: - |
RIOK3 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_061540 {REF} {Length: 1838} {TRANSSPLICED} {Pfam: RIO1 family [PF01163.24, score=78.6]} {Human: ENSG00000101782, RIOK3, RIO kinase 3, [Score=219, Expect=4e-64]} {Mouse: ENSMUSG00000024404, Riok3, RIO kinase 3, [Score=224, Expect=3e-66]} {Dmel: FBgn0031643, CG3008, [Score=151, Expect=5e-39]} {Celegans: WBGene00014012, riok-3, Serine/threonine-protein kinase RIO3, [Score=106, Expect=4e-24]} {RNA1509_19648} {RNA1310_14682, RNA1509_19648} {RNA1509_19648, RNA815_16143} |
| 7. | MligTC455_25138 | 152 | 3.17 | Mlig455_020678 | Neo: - Age: - |
SHC2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_020678 {REF} {Length: 2199} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=109.4]; SH2 domain [PF00017.26, score=43.4]} {Human: ENSG00000129946, SHC2, SHC adaptor protein 2, [RH, Score=228, Expect=1e-68]} {Mouse: ENSMUSG00000042626, Shc1, src homology 2 domain-containing transforming protein C1, [RH, Score=164, Expect=5e-45]; ENSMUSG00000035109, Shc4, SHC (Src homology 2 domain containing) family, member 4, [RH, Score=159, Expect=8e-43]; ENSMUSG00000021448, Shc3, src homology 2 domain-containing transforming protein C3, [RH, Score=157, Expect=5e-43]} {Dmel: FBgn0015296, Shc, SHC-adaptor protein, [RH, Score=243, Expect=1e-76]} {Celegans: WBGene00018788, shc-1, SHC-transforming protein homolog 1, [Score=98.6, Expect=9e-24]} {Smed: dd_Smed_v6_5308_0_1, dd_Smed_v6_5308_0_1, [RH, Score=192, Expect=5e-58]} {RNA1509_24719} {RNA1310_21459.1} {RNA815_25135} |
| 8. | MligTC455_44719 | 880 | 18.34 | Mlig455_058369 | Neo: - Age: - Region-enriched R5: 1.007/0.00562 |
CASP9 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_058369 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=119.2]; Caspase recruitment domain [PF00619.23, score=44.3]} {Human: ENSG00000132906, CASP9, caspase 9, [RH, Score=155, Expect=4e-42]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=153, Expect=4e-41]; ENSMUSG00000029863, Casp2, caspase 2, [Score=149, Expect=1e-39]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=121, Expect=2e-30]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [RH, Score=169, Expect=1e-46]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=116, Expect=9e-30]} {RNA1509_6944} {RNA1310_8124, RNA1509_6944} {RNA1509_6944, RNA815_4074} |
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