Data search


search
Exact
Search

Results for MligTC455_23072

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23072 3240 67.49 Mlig455_069014

Neo: -

Age: -

DAD1 Mlig455_069014 {REF} {Length: 2597} {TRANSSPLICED} {Pfam: DAD family [PF02109.18, score=154.5]} {Human: ENSG00000129562, DAD1, defender against cell death 1, [RH, Score=166, Expect=3e-54]} {Mouse: ENSMUSG00000022174, Dad1, defender against cell death 1, [RH, Score=166, Expect=2e-54]} {Dmel: FBgn0263852, Dad1, Defender against apoptotic cell death 1, [RH, Score=157, Expect=1e-50]} {Celegans: WBGene00000896, dad-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1, [RH, Score=157, Expect=7e-51]} {Smed: dd_Smed_v6_2109_1_1, dd_Smed_v6_2109_1_1, [RH, Score=171, Expect=2e-56]} {RNA1509_55314} {RNA1310_21894} {RNA815_15458}

Cumulative graph for MligTC455_23072

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.213 6.178 0.03145 0.45015
RegionR2 0.361 6.178 0.18793 0.54226
RegionR3 0.676 6.178 0.00154 0.04095
RegionR4 -0.214 6.178 0.38345 0.70808
RegionR5 0.413 6.178 0.03584 0.14715
RegionR6 0.254 6.178 0.25048 0.83668
RegionR7 -0.203 6.178 0.45895 1.00000
RegionR8 -0.074 6.178 0.82232 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.104 6.178 0.15314 0.89533
RegenerationR2 -0.361 6.178 0.14921 0.58256
RegenerationR3 -0.014 6.178 0.95777 1.00000
RegenerationR4 0.407 6.178 0.11858 0.52416
RegenerationR5 0.03 6.178 0.90095 1.00000
RegenerationR6 0.589 6.178 0.02313 0.18893
RegenerationBL 0.94 6.178 0.00044 0.01297
RegenerationTP 0.469 6.178 0.13521 0.55223


Genes with expression patterns similar to MligTC455_23072

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23072 3240 67.49 Mlig455_069014

Neo: -

Age: -

DAD1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_069014 {REF} {Length: 2597} {TRANSSPLICED} {Pfam: DAD family [PF02109.18, score=154.5]} {Human: ENSG00000129562, DAD1, defender against cell death 1, [RH, Score=166, Expect=3e-54]} {Mouse: ENSMUSG00000022174, Dad1, defender against cell death 1, [RH, Score=166, Expect=2e-54]} {Dmel: FBgn0263852, Dad1, Defender against apoptotic cell death 1, [RH, Score=157, Expect=1e-50]} {Celegans: WBGene00000896, dad-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1, [RH, Score=157, Expect=7e-51]} {Smed: dd_Smed_v6_2109_1_1, dd_Smed_v6_2109_1_1, [RH, Score=171, Expect=2e-56]} {RNA1509_55314} {RNA1310_21894} {RNA815_15458}
2. MligTC455_23071 6515 135.73 Mlig455_000591, Mlig455_030388

Neo: -

Age: logFC(26M/2M)=0.424

DAD1 5.991 1.000 0.999 0.997 0.999 0.997 0.999

Mlig455_000591 {REF} {Length: 2602} {TRANSSPLICED} {Pfam: DAD family [PF02109.18, score=154.5]} {Human: ENSG00000129562, DAD1, defender against cell death 1, [RH, Score=166, Expect=3e-54]} {Mouse: ENSMUSG00000022174, Dad1, defender against cell death 1, [RH, Score=166, Expect=2e-54]} {Dmel: FBgn0263852, Dad1, Defender against apoptotic cell death 1, [RH, Score=157, Expect=1e-50]} {Celegans: WBGene00000896, dad-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1, [RH, Score=157, Expect=7e-51]} {Smed: dd_Smed_v6_2109_1_1, dd_Smed_v6_2109_1_1, [RH, Score=171, Expect=2e-56]} {RNA1509_55314, RNA1509_58961, RNA1509_7079, RNA1509_9519} {RNA1310_21894, RNA1509_58961, RNA1509_7079, RNA1509_9519} {RNA1509_58961, RNA1509_7079, RNA1509_9519, RNA815_15458}

Mlig455_030388 {REF} {Length: 2624} {TRANSSPLICED} {Pfam: DAD family [PF02109.18, score=154.5]} {Human: ENSG00000129562, DAD1, defender against cell death 1, [RH, Score=166, Expect=3e-54]} {Mouse: ENSMUSG00000022174, Dad1, defender against cell death 1, [RH, Score=166, Expect=2e-54]} {Dmel: FBgn0263852, Dad1, Defender against apoptotic cell death 1, [RH, Score=157, Expect=1e-50]} {Celegans: WBGene00000896, dad-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1, [RH, Score=157, Expect=7e-51]} {Smed: dd_Smed_v6_2109_1_1, dd_Smed_v6_2109_1_1, [RH, Score=171, Expect=2e-56]} {RNA1509_51559, RNA1509_55314, RNA1509_56164, RNA1509_5925} {RNA1310_21894, RNA1509_51559, RNA1509_55314, RNA1509_56164, RNA1509_5925} {RNA1509_51559, RNA1509_55314, RNA1509_56164, RNA1509_5925, RNA815_15458}
3. MligTC455_47469 5905 123.03 Mlig455_016934

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.583

Region-enriched R4: 1.206/0.00001

Regeneration-enriched BL: 1.456
Regeneration-enriched TP: 1.192

PSMA6 1.731 - - - 0.972 0.759 - Mlig455_016934 {REF} {Length: 1535} {Pfam: Proteasome subunit [PF00227.28, score=184.0]; Proteasome subunit A N-terminal signature [PF10584.11, score=51.7]} {Human: ENSG00000100902, PSMA6, proteasome subunit alpha 6, [RH, Score=322, Expect=7e-112]} {Mouse: ENSMUSG00000021024, Psma6, proteasome (prosome, macropain) subunit, alpha type 6, [RH, Score=322, Expect=5e-112]} {Dmel: FBgn0050382, CG30382, [RH, Score=302, Expect=3e-104]} {Celegans: WBGene00003922, pas-1, Proteasome subunit alpha type-6, [RH, Score=278, Expect=1e-94]} {Smed: dd_Smed_v6_3387_0_1, dd_Smed_v6_3387_0_1, [RH, Score=341, Expect=9e-120]} {RNA1509_997} {RNA1310_22203.1} {RNA815_9159}
4. MligTC455_47470 12419 258.74 Mlig455_016921, Mlig455_017025

Neo: -

Age: -

Region-enriched R4: 1.297/0.00000

Regeneration-enriched BL: 1.467
Regeneration-enriched TP: 1.215

PSMA6 1.717 - - - 0.951 0.766 -

Mlig455_016921 {REF} {Length: 1536} {Pfam: Proteasome subunit [PF00227.28, score=184.0]; Proteasome subunit A N-terminal signature [PF10584.11, score=51.7]} {Human: ENSG00000100902, PSMA6, proteasome subunit alpha 6, [RH, Score=322, Expect=7e-112]} {Mouse: ENSMUSG00000021024, Psma6, proteasome (prosome, macropain) subunit, alpha type 6, [RH, Score=322, Expect=5e-112]} {Dmel: FBgn0050382, CG30382, [RH, Score=302, Expect=3e-104]} {Celegans: WBGene00003922, pas-1, Proteasome subunit alpha type-6, [RH, Score=278, Expect=1e-94]} {Smed: dd_Smed_v6_3387_0_1, dd_Smed_v6_3387_0_1, [RH, Score=341, Expect=9e-120]} {RNA1509_32787, RNA1509_46500, RNA1509_997} {RNA1310_22203.1, RNA1509_32787, RNA1509_46500, RNA1509_997} {RNA1509_32787, RNA1509_46500, RNA1509_997, RNA815_9159}

Mlig455_017025 {REF} {Length: 1517} {Pfam: Proteasome subunit [PF00227.28, score=184.0]; Proteasome subunit A N-terminal signature [PF10584.11, score=51.7]} {Human: ENSG00000100902, PSMA6, proteasome subunit alpha 6, [RH, Score=322, Expect=7e-112]} {Mouse: ENSMUSG00000021024, Psma6, proteasome (prosome, macropain) subunit, alpha type 6, [RH, Score=322, Expect=5e-112]} {Dmel: FBgn0050382, CG30382, [RH, Score=302, Expect=3e-104]} {Celegans: WBGene00003922, pas-1, Proteasome subunit alpha type-6, [RH, Score=278, Expect=1e-94]} {Smed: dd_Smed_v6_3387_0_1, dd_Smed_v6_3387_0_1, [RH, Score=341, Expect=9e-120]} {RNA1509_24917, RNA1509_997} {RNA1310_22203.1, RNA1509_24917} {RNA1509_24917, RNA815_9159}
5. MligTC455_45216 1023 21.32 Mlig455_030433, Mlig455_030470

Neo: -

Age: Up-Down-Up

Region-enriched R3: 2.770/0.01432
Region-enriched R6: 2.673/0.04233

1.674 - - - 0.724 - 0.950

Mlig455_030433 {REF} {Length: 3036} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=25.2]} {Smed: dd_Smed_v6_3827_0_1, dd_Smed_v6_3827_0_1, [RH, Score=81.3, Expect=1e-16]} {RNA1509_23582, RNA1509_31553, RNA1509_37381} {RNA1310_13137, RNA1509_23582, RNA1509_31553, RNA1509_37381} {RNA1509_23582, RNA1509_31553, RNA1509_37381, RNA815_31660}

Mlig455_030470 {REF} {Length: 3054} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=25.7]} {Smed: dd_Smed_v6_3827_0_1, dd_Smed_v6_3827_0_1, [RH, Score=81.3, Expect=7e-17]} {RNA1509_31553} {RNA1310_13137} {RNA815_31660}
6. MligTC455_25705 827 17.22 Mlig455_021270

Neo: -

Age: -

Region-enriched R6: 2.555/0.01551

LAMB1 0.959 - - - - - 0.959 Mlig455_021270 {REF} {Length: 6132} {Pfam: Laminin EGF domain [PF00053.26, score=315.1]; Laminin N-terminal (Domain VI) [PF00055.19, score=163.3]; Crescentin protein [PF19220.2, score=25.9]} {Human: ENSG00000091136, LAMB1, laminin subunit beta 1, [RH, Score=853, Expect=0.0]; ENSG00000172037, LAMB2, laminin subunit beta 2, [RH, Score=823, Expect=0.0]} {Mouse: ENSMUSG00000002900, Lamb1, laminin B1, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0261800, LanB1, [RH, Score=861, Expect=0.0]} {Celegans: WBGene00002247, lam-1, LAMinin related. See also lmb, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_6093_0_1, dd_Smed_v6_6093_0_1, [RH, Score=427, Expect=8e-123]} {RNA1509_3908} {RNA1310_668.1, RNA1509_3908} {RNA1509_3908, RNA815_1065}
7. MligTC455_18565 458 9.53 Mlig455_032920

Neo: -

Age: -

0.957 - - - - - 0.957 Mlig455_032920 {REF} {Length: 3672} {TRANSSPLICED} {Pfam: Uncharacterized protein conserved in bacteria (DUF2064) [PF09837.11, score=41.8]; Glycosyl transferase family 2 [PF00535.28, score=38.9]} {Smed: dd_Smed_v6_6076_0_1, dd_Smed_v6_6076_0_1, [RH, Score=211, Expect=2e-59]} {RNA1509_10264, RNA1509_18689, RNA1509_28133, RNA1509_52370, RNA1509_57851} {RNA1310_5492.1, RNA1509_10264, RNA1509_18689, RNA1509_28133, RNA1509_52370, RNA1509_57851} {RNA1509_10264, RNA1509_18689, RNA1509_28133, RNA1509_52370, RNA1509_57851, RNA815_2741}
8. MligTC455_37490 435 9.07 Mlig455_053854

Neo: -

Age: -

MTTP 0.953 - - - - - 0.953 Mlig455_053854 {REF} {Length: 3548} {Pfam: MTP large subunit, lipid-binding domain [PF19444.1, score=86.5]} {Human: ENSG00000138823, MTTP, microsomal triglyceride transfer protein, [RH, Score=84.7, Expect=4e-16]} {Mouse: ENSMUSG00000028158, Mttp, microsomal triglyceride transfer protein, [RH, Score=88.2, Expect=2e-17]} {Dmel: FBgn0266369, Mtp, Microsomal triacylglycerol transfer protein, [RH, Score=63.9, Expect=5e-10]} {Smed: dd_Smed_v6_5671_0_1, dd_Smed_v6_5671_0_1, [RH, Score=92.4, Expect=4e-19]} {RNA1509_35244, RNA1509_51235, RNA1509_7518} {RNA1310_2499, RNA1509_35244, RNA1509_51235} {RNA1509_35244, RNA1509_51235, RNA815_854.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA