TomoSeq data search

Data search

Results for MligTC455_23104

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23104

17

0.36

Mlig455_057123, Mlig455_069295

Neo: -

Age: Up-Down-Down

Mlig455_057123 {REF} {Length: 1780} {RNA1310_48197}

Mlig455_069295 {REF} {Length: 1754} {RNA1310_48197}

Cumulative graph for MligTC455_23104

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.811	0.923	0.67646	1.00000
RegionR2	1.058	0.923	0.99964	1.00000
RegionR3	1.117	0.923	0.11882	0.59689
RegionR4	0.843	0.923	0.77056	1.00000
RegionR5	1.453	0.923	0.28425	0.61382
RegionR6	-2.055	0.923	0.99966	1.00000
RegionR7	-1.823	0.923	0.99971	1.00000
RegionR8	-1.404	0.923	0.99966	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.828	0.923	0.99478	1.00000
RegenerationR2	1.982	0.923	0.99990	1.00000
RegenerationR3	2.657	0.923	0.02488	0.28364
RegenerationR4	-1.198	0.923	0.79806	0.98561
RegenerationR5	2.078	0.923	0.01141	0.18820
RegenerationR6	3.699	0.923	0.99986	1.00000
RegenerationBL	3.18	0.923	0.99993	1.00000
RegenerationTP	2.583	0.923	0.99993	1.00000

Genes with expression patterns similar to MligTC455_23104

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23104	17	0.36	Mlig455_057123, Mlig455_069295	Neo: - Age: Up-Down-Down		3	1.000	1.000	-	-	-	1.000	Mlig455_057123 {REF} {Length: 1780} {RNA1310_48197} Mlig455_069295 {REF} {Length: 1754} {RNA1310_48197}
2.	MligTC455_36288	10	0.22	Mlig455_057124	Neo: - Age: Up-Down-Down	PRR9	1.658	0.707	0.951	-	-	-	-	Mlig455_057124 {REF} {Length: 1984} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=5e-06]}
3.	MligTC455_32755	37	0.77	Mlig455_058772	Neo: - Age: -		0.965	-	0.965	-	-	-	-	Mlig455_058772 {REF} {Length: 2207} {NoTransDecoderORF} {RNA1509_39860} {RNA1310_61920.1} {RNA815_29386.1}
4.	MligTC455_32508	11	0.23	Mlig455_046203	Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.885/0.04639		0.961	-	0.961	-	-	-	-	Mlig455_046203 {REF} {Length: 1982} {RNA1310_30626.1} {RNA815_29729}
5.	MligTC455_54887	6	0.12	Mlig455_057135	Neo: - Age: -		0.956	-	0.956	-	-	-	-	Mlig455_057135 {REF} {Length: 278} {NoTransDecoderORF} {RNA1509_22940} {RNA1310_37294} {RNA815_60640}
6.	MligTC455_36620	55	1.15	Mlig455_025782, Mlig455_064407	Neo: - Age: Up-Down-Down Region-enriched R2: 7.390/0.00016 Regeneration-enriched R3: 6.407 Regeneration-enriched R5: 4.676	MAB21L2	0.951	-	-	-	-	-	0.951	Mlig455_025782 {REF} {Length: 2174} {Pfam: Mab-21 protein [PF03281.16, score=229.1]} {Human: ENSG00000181541, MAB21L2, mab-21 like 2, [RH, Score=540, Expect=0.0]; ENSG00000180660, MAB21L1, mab-21 like 1, [RH, Score=532, Expect=0.0]} {Mouse: ENSMUSG00000057777, Mab21l2, mab-21-like 2 (C. elegans), [RH, Score=541, Expect=0.0]; ENSMUSG00000056947, Mab21l1, mab-21-like 1 (C. elegans), [RH, Score=532, Expect=0.0]} {Dmel: FBgn0029003, mab-21, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00003112, mab-21, Protein male abnormal 21, [RH, Score=412, Expect=2e-143]} {Smed: dd_Smed_v6_14783_0_1, dd_Smed_v6_14783_0_1, [RH, Score=462, Expect=2e-162]} {RNA1509_59733} {RNA1310_10365.2} {RNA815_9407} Mlig455_064407 {REF} {Length: 2273} {Pfam: Mab-21 protein [PF03281.16, score=229.1]} {Human: ENSG00000181541, MAB21L2, mab-21 like 2, [RH, Score=540, Expect=0.0]; ENSG00000180660, MAB21L1, mab-21 like 1, [RH, Score=532, Expect=0.0]} {Mouse: ENSMUSG00000057777, Mab21l2, mab-21-like 2 (C. elegans), [RH, Score=541, Expect=0.0]; ENSMUSG00000056947, Mab21l1, mab-21-like 1 (C. elegans), [RH, Score=532, Expect=0.0]} {Dmel: FBgn0029003, mab-21, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00003112, mab-21, Protein male abnormal 21, [RH, Score=412, Expect=2e-143]} {Smed: dd_Smed_v6_14783_0_1, dd_Smed_v6_14783_0_1, [RH, Score=462, Expect=2e-162]} {RNA1509_59733} {RNA1310_10365.2} {RNA815_9407}

Berezikov Lab - 2020-2021 © ERIBA