Data search
Results for MligTC455_23107
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23107 | 1671 | 34.82 | Mlig455_029319 | Neo: Irradiation Age: - Region-specific R4: 1.628 Region-enriched R4: 2.026/0.00000 |
Mlig455_029319 {REF} {Length: 612} {TRANSSPLICED} {RNA1509_18971} {RNA1310_54774, RNA1509_18971} {RNA1509_18971, RNA815_30327.1} |
Cumulative graph for MligTC455_23107
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.771 | 5.33 | 0.26592 | 0.91526 | |
| RegionR2 | -0.272 | 5.33 | 0.43681 | 0.82661 | |
| RegionR3 | -0.035 | 5.33 | 0.90586 | 1.00000 | |
| RegionR4 | 2.026 | 5.33 | 0.00000 | 0.00000 | Specific for R4: 1.628 |
| RegionR5 | 0.73 | 5.33 | 0.00450 | 0.03196 | |
| RegionR6 | -0.047 | 5.33 | 0.87419 | 1.00000 | |
| RegionR7 | -0.605 | 5.33 | 0.09728 | 0.59735 | |
| RegionR8 | -1.026 | 5.33 | 0.02155 | 0.28619 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.593 | 5.33 | 0.55797 | 1.00000 | |
| RegenerationR2 | -0.634 | 5.33 | 0.04982 | 0.36815 | |
| RegenerationR3 | -0.178 | 5.33 | 0.59763 | 0.90709 | |
| RegenerationR4 | -1.001 | 5.33 | 0.00246 | 0.06393 | |
| RegenerationR5 | -0.167 | 5.33 | 0.58994 | 0.90565 | |
| RegenerationR6 | -0.193 | 5.33 | 0.57999 | 0.85775 | |
| RegenerationBL | 0.186 | 5.33 | 0.62734 | 0.96952 | |
| RegenerationTP | 0.369 | 5.33 | 0.38595 | 0.81939 |
Genes with expression patterns similar to MligTC455_23107
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23107 | 1671 | 34.82 | Mlig455_029319 | Neo: Irradiation Age: - Region-specific R4: 1.628 Region-enriched R4: 2.026/0.00000 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_029319 {REF} {Length: 612} {TRANSSPLICED} {RNA1509_18971} {RNA1310_54774, RNA1509_18971} {RNA1509_18971, RNA815_30327.1} | |
| 2. | MligTC455_23108 | 1665 | 34.69 | Mlig455_058871 | Neo: Irradiation Age: logFC(26M/2M)=0.805 Region-specific R4: 1.622 Region-enriched R4: 2.091/0.00000 |
5.935 | 0.998 | 0.997 | 0.968 | 0.989 | 0.985 | 0.998 | Mlig455_058871 {REF} {Length: 614} {TRANSSPLICED} {RNA1509_26526} {RNA1310_54774} {RNA815_30327.1} | |
| 3. | MligTC455_39552 | 477 | 9.94 | Mlig455_067435 | Neo: Irradiation Age: - Region-enriched R4: 1.538/0.01409 |
B3GNT5 | 0.953 | - | 0.953 | - | - | - | - | Mlig455_067435 {REF} {Length: 3849} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=124.8]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [RH, Score=127, Expect=5e-32]; ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [RH, Score=124, Expect=5e-31]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=117, Expect=8e-29]; ENSMUSG00000079445, B3gnt7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=117, Expect=2e-28]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=112, Expect=3e-27]} {Dmel: FBgn0000221, brn, brainiac, [Score=132, Expect=9e-35]} {Celegans: WBGene00000270, bre-5, Beta-1,3-galactosyltransferase bre-5, [Score=108, Expect=2e-26]} {Smed: dd_Smed_v6_8163_0_1, dd_Smed_v6_8163_0_1, [RH, Score=238, Expect=3e-74]} {RNA1509_21769, RNA1509_8889} {RNA1310_13743.1, RNA1509_21769, RNA1509_8889} {RNA1509_21769, RNA1509_8889, RNA815_1518.2} |
| 4. | MligTC455_16928 | 753 | 15.68 | Mlig455_052906 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.417/0.00004 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_052906 {REF} {Length: 657} {TRANSSPLICED} {Pfam: Uncharacterised protein family UPF0047 [PF01894.19, score=129.2]} {Dmel: FBgn0263355, CG31688, [RH, Score=173, Expect=2e-55]} {Smed: dd_Smed_v6_5221_0_1, dd_Smed_v6_5221_0_1, [RH, Score=185, Expect=2e-61]} {RNA1509_20768, RNA1509_26245} {RNA1310_18267, RNA1509_20768, RNA1509_26245} {RNA1509_20768, RNA1509_26245, RNA815_23695.2} | |
| 5. | MligTC455_16929 | 712 | 14.82 | Mlig455_052920 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.572/0.00000 |
HBS1L | 0.952 | - | - | - | 0.952 | - | - | Mlig455_052920 {REF} {Length: 2506} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=148.0]; Uncharacterised protein family UPF0047 [PF01894.19, score=125.2]; Elongation factor Tu C-terminal domain [PF03143.19, score=53.4]; 50S ribosome-binding GTPase [PF01926.25, score=25.3]} {Human: ENSG00000112339, HBS1L, HBS1 like translational GTPase, [RH, Score=441, Expect=2e-145]} {Mouse: ENSMUSG00000019977, Hbs1l, Hbs1-like (S. cerevisiae), [RH, Score=405, Expect=3e-131]} {Dmel: FBgn0042712, HBS1, [RH, Score=414, Expect=6e-135]} {Celegans: WBGene00010622, K07A12.4, [RH, Score=337, Expect=4e-106]} {Smed: dd_Smed_v6_9327_0_1, dd_Smed_v6_9327_0_1, [RH, Score=397, Expect=4e-129]} {RNA1509_18150} {RNA1310_11738} {RNA815_5048.1} |
| 6. | MligTC455_19572 | 723 | 15.05 | Mlig455_033240 | Neo: - Age: Up-Down-Up Region-specific R4: 2.725 Region-enriched R4: 2.257/0.00006 |
CRYZ | 0.95 | - | 0.950 | - | - | - | - | Mlig455_033240 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Zinc-binding dehydrogenase [PF00107.28, score=64.6]; Zinc-binding dehydrogenase [PF13602.8, score=49.8]; Alcohol dehydrogenase GroES-like domain [PF08240.14, score=34.0]} {Human: ENSG00000116791, CRYZ, crystallin zeta, [RH, Score=280, Expect=8e-93]} {Mouse: ENSMUSG00000028199, Cryz, crystallin, zeta, [RH, Score=286, Expect=5e-95]} {Dmel: FBgn0033883, CG16935, [RH, Score=70.9, Expect=2e-13]} {Celegans: WBGene00009554, F39B2.3, [RH, Score=222, Expect=2e-70]} {Smed: dd_Smed_v6_2717_0_1, dd_Smed_v6_2717_0_1, [RH, Score=254, Expect=3e-83]} {RNA1509_28582} {RNA1310_34229, RNA1509_28582} {RNA1509_28582, RNA815_12373.1} |
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