TomoSeq data search

Data search

Results for MligTC455_23113

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23113

596

12.42

Mlig455_020636

Neo: -

Age: -

ARFGEF1

Mlig455_020636 {REF} {Length: 5082} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=222.0]; Guanine nucleotide exchange factor in Golgi transport N-terminal [PF12783.9, score=162.4]; Dimerisation and cyclophilin-binding domain of Mon2 [PF16213.7, score=123.3]; Domain of unknown function (DUF1981) [PF09324.12, score=50.1]} {Human: ENSG00000066777, ARFGEF1, ADP ribosylation factor guanine nucleotide exchange factor 1, [Score=877, Expect=0.0]; ENSG00000124198, ARFGEF2, ADP ribosylation factor guanine nucleotide exchange factor 2, [Score=856, Expect=0.0]} {Mouse: ENSMUSG00000067851, Arfgef1, ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited), [Score=873, Expect=0.0]; ENSMUSG00000074582, Arfgef2, ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited), [Score=849, Expect=0.0]} {Dmel: FBgn0028538, Sec71, Secretory 71, [Score=790, Expect=0.0]} {Celegans: WBGene00012386, agef-1, Arf-1 Guanine nucleotide Exchange Factor homolog, [Score=552, Expect=2e-171]} {Smed: dd_Smed_v6_5314_0_1, dd_Smed_v6_5314_0_1, [Score=773, Expect=0.0]} {RNA1509_1001, RNA1509_11417} {RNA1310_853, RNA1509_11417} {RNA1509_11417, RNA815_258}

Cumulative graph for MligTC455_23113

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.468	4.019	0.61618	1.00000
RegionR2	-0.735	4.019	0.08230	0.35184
RegionR3	0.074	4.019	0.82332	1.00000
RegionR4	0.785	4.019	0.04081	0.16782
RegionR5	0.612	4.019	0.03456	0.14335
RegionR6	-0.141	4.019	0.69083	1.00000
RegionR7	-0.461	4.019	0.33672	0.97214
RegionR8	-0.602	4.019	0.31974	0.95407

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.603	4.019	0.03656	0.65263
RegenerationR2	0.49	4.019	0.14462	0.57602
RegenerationR3	-0.255	4.019	0.48820	0.85377
RegenerationR4	-0.068	4.019	0.85284	1.00000
RegenerationR5	-0.001	4.019	0.99680	1.00000
RegenerationR6	0.353	4.019	0.35907	0.70363
RegenerationBL	-0.298	4.019	0.58393	0.93533
RegenerationTP	-0.468	4.019	0.43469	0.85622

Genes with expression patterns similar to MligTC455_23113

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23113	596	12.42	Mlig455_020636	Neo: - Age: -	ARFGEF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020636 {REF} {Length: 5082} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=222.0]; Guanine nucleotide exchange factor in Golgi transport N-terminal [PF12783.9, score=162.4]; Dimerisation and cyclophilin-binding domain of Mon2 [PF16213.7, score=123.3]; Domain of unknown function (DUF1981) [PF09324.12, score=50.1]} {Human: ENSG00000066777, ARFGEF1, ADP ribosylation factor guanine nucleotide exchange factor 1, [Score=877, Expect=0.0]; ENSG00000124198, ARFGEF2, ADP ribosylation factor guanine nucleotide exchange factor 2, [Score=856, Expect=0.0]} {Mouse: ENSMUSG00000067851, Arfgef1, ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited), [Score=873, Expect=0.0]; ENSMUSG00000074582, Arfgef2, ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited), [Score=849, Expect=0.0]} {Dmel: FBgn0028538, Sec71, Secretory 71, [Score=790, Expect=0.0]} {Celegans: WBGene00012386, agef-1, Arf-1 Guanine nucleotide Exchange Factor homolog, [Score=552, Expect=2e-171]} {Smed: dd_Smed_v6_5314_0_1, dd_Smed_v6_5314_0_1, [Score=773, Expect=0.0]} {RNA1509_1001, RNA1509_11417} {RNA1310_853, RNA1509_11417} {RNA1509_11417, RNA815_258}
2.	MligTC455_53666	1759	36.64	Mlig455_040811	Neo: - Age: -	ACAT1	2.478	-	-	0.759	0.953	-	0.766	Mlig455_040811 {REF} {Length: 4843} {TRANSSPLICED} {Pfam: Mpp10 protein [PF04006.14, score=422.2]; Thiolase, N-terminal domain [PF00108.25, score=320.7]; Thiolase, C-terminal domain [PF02803.20, score=134.6]; Family of unknown function (DUF5447) [PF17525.4, score=28.0]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=21.5]} {Human: ENSG00000075239, ACAT1, acetyl-CoA acetyltransferase 1, [RH, Score=408, Expect=2e-129]} {Mouse: ENSMUSG00000032047, Acat1, acetyl-Coenzyme A acetyltransferase 1, [RH, Score=407, Expect=4e-129]} {Dmel: FBgn0029969, CG10932, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00002183, kat-1, Acetyl-CoA acetyltransferase homolog, mitochondrial, [RH, Score=432, Expect=5e-139]} {Smed: dd_Smed_v6_1377_0_1, dd_Smed_v6_1377_0_1, [RH, Score=452, Expect=2e-146]} {RNA1509_7248} {RNA1310_18235, RNA1509_7248} {RNA1509_7248, RNA815_10304}
3.	MligTC455_11973	2442	50.87	Mlig455_051139, Mlig455_051213	Neo: - Age: logFC(26M/2M)=-0.313	AP3M1	0.981	-	-	-	0.981	-	-	Mlig455_051139 {REF} {Length: 2476} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=215.1]; Clathrin adaptor complex small chain [PF01217.22, score=39.3]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=543, Expect=0.0]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [RH, Score=516, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=540, Expect=0.0]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [RH, Score=515, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=509, Expect=3e-180]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=460, Expect=3e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [RH, Score=474, Expect=1e-166]} {RNA1509_4174, RNA1509_9522} {RNA1310_7893, RNA1509_4174, RNA1509_9522} {RNA1509_4174, RNA1509_9522, RNA815_2536.1} Mlig455_051213 {REF} {Length: 1957} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=214.4]; Clathrin adaptor complex small chain [PF01217.22, score=39.3]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=538, Expect=0.0]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [RH, Score=512, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=536, Expect=0.0]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [RH, Score=510, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=504, Expect=3e-178]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=459, Expect=9e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [RH, Score=468, Expect=3e-164]} {RNA1509_59137, RNA1509_9522} {RNA1310_7893, RNA1509_59137} {RNA1509_59137, RNA815_2536.1}
4.	MligTC455_25967	430	8.96	Mlig455_066389	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_066389 {REF} {Length: 3501} {TRANSSPLICED} {RNA1509_29764, RNA1509_54447} {RNA1310_15026.1, RNA1509_54447} {RNA1509_54447, RNA815_9015.1}
5.	MligTC455_45105	609	12.68	Mlig455_042122	Neo: - Age: -	QRICH2	0.959	-	-	-	0.959	-	-	Mlig455_042122 {REF} {Length: 1526} {TRANSSPLICED} {Pfam: Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=46.3]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=59.7, Expect=9e-10]} {Mouse: ENSMUSG00000045350, Fam186a, family with sequence similarity 186, member A, [RH, Score=70.1, Expect=2e-13]} {RNA1310_22924.1} {RNA815_30357.2}
6.	MligTC455_47397	223	4.65	Mlig455_045414	Neo: - Age: Down-Down-Up	B3GNT4	0.952	-	-	-	0.952	-	-	Mlig455_045414 {REF} {Length: 2211} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=126.2]} {Human: ENSG00000176383, B3GNT4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [RH, Score=112, Expect=7e-27]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=107, Expect=4e-25]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=104, Expect=1e-24]} {Dmel: FBgn0035558, CG11357, [Score=128, Expect=2e-32]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=73.6, Expect=3e-14]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [RH, Score=259, Expect=3e-83]} {RNA1509_45947, RNA1509_48792} {RNA1310_17060, RNA1509_45947, RNA1509_48792} {RNA1509_45947, RNA1509_48792, RNA815_18250}
7.	MligTC455_22933	497	10.36	Mlig455_043362	Neo: - Age: -	CNPY2	0.95	0.950	-	-	-	-	-	Mlig455_043362 {REF} {Length: 2002} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=79.6]} {Human: ENSG00000257727, CNPY2, canopy FGF signaling regulator 2, [RH, Score=70.5, Expect=2e-14]; ENSG00000144785, AC073896.1, novel protein, [RH, Score=69.7, Expect=2e-13]} {Mouse: ENSMUSG00000025381, Cnpy2, canopy FGF signaling regulator 2, [RH, Score=68.2, Expect=1e-13]} {Celegans: WBGene00017169, F01F1.15, [Score=56.6, Expect=1e-09]} {RNA1509_46925, RNA1509_52897} {RNA1310_13660.1, RNA1509_46925, RNA1509_52897} {RNA1509_46925, RNA1509_52897, RNA815_7407.1}

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