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Results for MligTC455_23173

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23173 149 3.10 Mlig455_005271

Neo: -

Age: -

 RILPL1 Mlig455_005271 {REF} {Length: 3408} {Pfam: JNK_SAPK-associated protein-1 [PF09744.11, score=67.7]; Rab interacting lysosomal protein [PF11461.10, score=44.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.0]; Bap31/Bap29 cytoplasmic coiled-coil domain [PF18035.3, score=21.9]} {Human: ENSG00000188026, RILPL1, Rab interacting lysosomal protein like 1, [Score=99.0, Expect=3e-22]} {Mouse: ENSMUSG00000029392, Rilpl1, Rab interacting lysosomal protein-like 1, [Score=112, Expect=3e-27]} {Dmel: FBgn0024985, CG11448, [Score=119, Expect=2e-29]} {Celegans: WBGene00007860, rilp-1, RILP (Rab7-Interacting Lysosomal Protein) homolog, [Score=94.0, Expect=7e-21]} {Smed: dd_Smed_v6_4713_0_1, dd_Smed_v6_4713_0_1, [Score=288, Expect=4e-94]} {RNA1509_11251} {RNA1310_32743} {RNA815_28705.1}

Cumulative graph for MligTC455_23173

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.241 2.201 0.92588 1.00000
RegionR2 -0.433 2.201 0.66065 0.99262
RegionR3 0.064 2.201 0.92280 1.00000
RegionR4 0.762 2.201 0.34772 0.66878
RegionR5 -0.606 2.201 0.46461 0.82673
RegionR6 1.91 2.201 0.00296 0.07834
RegionR7 0.164 2.201 0.87579 1.00000
RegionR8 -1.62 2.201 0.40813 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.517 2.201 0.88935 1.00000
RegenerationR2 1.201 2.201 0.03531 0.31007
RegenerationR3 0.701 2.201 0.31315 0.74333
RegenerationR4 -0.009 2.201 0.98718 1.00000
RegenerationR5 1.253 2.201 0.05915 0.38732
RegenerationR6 -0.601 2.201 0.30132 0.65099
RegenerationBL 0.967 2.201 0.33046 0.69669
RegenerationTP 0.482 2.201 0.73394 1.00000


Genes with expression patterns similar to MligTC455_23173

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23173 149 3.1 Mlig455_005271

Neo: -

Age: -

 RILPL1 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_005271 {REF} {Length: 3408} {Pfam: JNK_SAPK-associated protein-1 [PF09744.11, score=67.7]; Rab interacting lysosomal protein [PF11461.10, score=44.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.0]; Bap31/Bap29 cytoplasmic coiled-coil domain [PF18035.3, score=21.9]} {Human: ENSG00000188026, RILPL1, Rab interacting lysosomal protein like 1, [Score=99.0, Expect=3e-22]} {Mouse: ENSMUSG00000029392, Rilpl1, Rab interacting lysosomal protein-like 1, [Score=112, Expect=3e-27]} {Dmel: FBgn0024985, CG11448, [Score=119, Expect=2e-29]} {Celegans: WBGene00007860, rilp-1, RILP (Rab7-Interacting Lysosomal Protein) homolog, [Score=94.0, Expect=7e-21]} {Smed: dd_Smed_v6_4713_0_1, dd_Smed_v6_4713_0_1, [Score=288, Expect=4e-94]} {RNA1509_11251} {RNA1310_32743} {RNA815_28705.1}
2. MligTC455_23172 493 10.27 Mlig455_005040

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.433

Region-enriched R6: 1.479/0.02831

 GRIA2 4.229 0.885 - 0.817 0.952 0.836 0.739 Mlig455_005040 {REF} {Length: 2083} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=85.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=68.8]; Ligand-gated ion channel [PF00060.28, score=65.0]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=145, Expect=7e-37]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=139, Expect=7e-35]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=145, Expect=5e-37]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=139, Expect=6e-35]} {Dmel: FBgn0038837, CG3822, [Score=119, Expect=2e-28]} {Celegans: WBGene00001617, glr-6, GLutamate Receptor family (AMPA), [Score=122, Expect=1e-29]} {Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [Score=126, Expect=4e-31]} {RNA1509_11251} {RNA1310_37359} {RNA815_2128.1}
3. MligTC455_23174 234 4.87 Mlig455_005279

Neo: -

Age: -

Region-enriched R6: 1.889/0.03946

 GRIA2 3.598 0.948 - 0.951 0.832 0.867 - Mlig455_005279 {REF} {Length: 3002} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=87.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=87.1]; Ligand-gated ion channel [PF00060.28, score=65.7]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=170, Expect=1e-44]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=170, Expect=6e-45]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=162, Expect=6e-42]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=170, Expect=9e-45]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=170, Expect=6e-45]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=162, Expect=3e-42]} {Dmel: FBgn0038837, CG3822, [Score=136, Expect=1e-33]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=135, Expect=3e-33]} {Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [Score=150, Expect=2e-38]} {RNA1509_11251} {RNA1310_13034, RNA1509_11251} {RNA1509_11251, RNA815_2128.1}
4. MligTC455_42469 409 8.52 Mlig455_036466

Neo: -

Age: -

Region-enriched R6: 2.740/0.00005

 1.707 0.952 - 0.755 - - - Mlig455_036466 {REF} {Length: 887} {Pfam: EGF-like domain [PF00008.29, score=23.2]} {RNA1509_26867} {RNA1310_25738, RNA1509_26867} {RNA1509_26867, RNA815_15173}
5. MligTC455_48544 413 8.6 Mlig455_007105

Neo: -

Age: Up-Down-Down

 1.695 - - 0.731 0.964 - - Mlig455_007105 {REF} {Length: 4025} {RNA1509_23397, RNA1509_51305} {RNA1310_34393.1, RNA1509_23397} {RNA1509_23397, RNA815_20574}
6. MligTC455_13846 32 0.67 Mlig455_013761

Neo: -

Age: -

 CALM2 0.957 0.957 - - - - - Mlig455_013761 {REF} {Length: 941} {Pfam: EF hand [PF00036.34, score=94.2]; EF-hand domain [PF13405.8, score=86.1]; EF-hand domain pair [PF13499.8, score=83.6]; EF hand [PF13202.8, score=77.1]; EF-hand domain pair [PF13833.8, score=42.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.3]; EF-hand domain [PF14658.8, score=23.8]; Ca2+ insensitive EF hand [PF08726.12, score=21.5]; Caleosin related protein [PF05042.15, score=21.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=60.1, Expect=1e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=60.1, Expect=1e-11]; ENSG00000198668, CALM1, calmodulin 1, [Score=60.1, Expect=1e-11]; ENSG00000178363, CALML3, calmodulin like 3, [Score=59.3, Expect=2e-11]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=60.5, Expect=1e-11]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=60.1, Expect=8e-12]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=60.1, Expect=8e-12]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=59.7, Expect=1e-11]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=60.8, Expect=3e-12]} {Celegans: WBGene00019352, K03A1.4, [Score=70.9, Expect=8e-16]} {Smed: dd_Smed_v6_15455_0_1, dd_Smed_v6_15455_0_1, [RH, Score=97.4, Expect=1e-26]} {RNA1310_47452} {RNA815_31258}
7. MligTC455_53964 191 3.98 Mlig455_037522

Neo: -

Age: logFC(26M/2M)=0.823

Region-enriched R6: 3.461/0.00001

Regeneration-upregulated R5: 3.204

Regeneration-enriched R5: 3.204

 0.95 0.950 - - - - - Mlig455_037522 {REF} {Length: 727} {Pfam: HYD1 signature containing ADP-ribosyltransferase [PF15633.8, score=50.4]} {RNA1509_6607} {RNA1310_59075} {RNA815_16430.3}

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