TomoSeq data search

Data search

Results for MligTC455_23181

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23181

24631

513.14

Mlig455_018969

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.213

RPS18

Mlig455_018969 {REF} {Length: 605} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=155.0]} {Human: ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=1e-71]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=213, Expect=5e-72]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=201, Expect=4e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=202, Expect=1e-67]} {RNA1509_11887, RNA1509_183, RNA1509_19061, RNA1509_3593, RNA1509_56392} {RNA1310_54614.1, RNA1509_11887, RNA1509_183, RNA1509_19061, RNA1509_3593, RNA1509_56392} {RNA1509_11887, RNA1509_183, RNA1509_19061, RNA1509_3593, RNA1509_56392, RNA815_18233.1}

Cumulative graph for MligTC455_23181

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.5	9.071	0.17093	0.79607
RegionR2	-0.588	9.071	0.07157	0.32676
RegionR3	0.226	9.071	0.42134	0.94449
RegionR4	0.23	9.071	0.44997	0.77873
RegionR5	0.29	9.071	0.28774	0.61849
RegionR6	0.269	9.071	0.33207	0.92010
RegionR7	0.327	9.071	0.22660	0.84740
RegionR8	-0.253	9.071	0.40835	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.895	9.071	0.04923	0.69564
RegenerationR2	-0.185	9.071	0.61256	0.92022
RegenerationR3	-0.182	9.071	0.62182	0.91739
RegenerationR4	-0.204	9.071	0.58482	0.90700
RegenerationR5	-0.122	9.071	0.74018	0.96850
RegenerationR6	-0.38	9.071	0.30040	0.65057
RegenerationBL	-0.383	9.071	0.22433	0.57341
RegenerationTP	-0.856	9.071	0.01372	0.20076

Genes with expression patterns similar to MligTC455_23181

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23181	24631	513.14	Mlig455_018969	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.213	RPS18	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018969 {REF} {Length: 605} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=155.0]} {Human: ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=1e-71]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=213, Expect=5e-72]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=201, Expect=4e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=202, Expect=1e-67]} {RNA1509_11887, RNA1509_183, RNA1509_19061, RNA1509_3593, RNA1509_56392} {RNA1310_54614.1, RNA1509_11887, RNA1509_183, RNA1509_19061, RNA1509_3593, RNA1509_56392} {RNA1509_11887, RNA1509_183, RNA1509_19061, RNA1509_3593, RNA1509_56392, RNA815_18233.1}
2.	MligTC455_31670	1807	37.64	Mlig455_042472	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.652 Region-enriched R4: 2.167/0.00909 Region-enriched R3: 2.148/0.00292		1.742	-	-	-	0.955	0.787	-	Mlig455_042472 {REF} {Length: 957} {RNA1509_3304, RNA1509_56059, RNA1509_6047} {RNA1310_18437, RNA1509_3304, RNA1509_56059, RNA1509_6047} {RNA1509_3304, RNA1509_56059, RNA1509_6047, RNA815_7167.1}
3.	MligTC455_29461	23656	492.83	Mlig455_021877	Neo: Int S/G2/M Age: -	RPL5	1.701	-	0.746	-	-	-	0.955	Mlig455_021877 {REF} {Length: 1113} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=291.1]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=362, Expect=9e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=394, Expect=2e-138]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=322, Expect=1e-110]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=342, Expect=2e-118]} {RNA1509_154, RNA1509_16244, RNA1509_36509} {RNA1310_31746.1, RNA1509_16244, RNA1509_36509} {RNA1509_16244, RNA1509_36509, RNA815_10534.2}
4.	MligTC455_29462	23309	485.61	Mlig455_021960	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.690	RPL5	1.686	-	0.735	-	-	-	0.951	Mlig455_021960 {REF} {Length: 1113} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=291.1]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=362, Expect=9e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=394, Expect=2e-138]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=322, Expect=1e-110]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=342, Expect=2e-118]} {RNA1509_154} {RNA1310_31746.1, RNA1509_154} {RNA1509_154, RNA815_10534.2}
5.	MligTC455_45644	666	13.87	Mlig455_034655	Neo: - Age: Up-Down-Up	ZNF17	0.95	-	-	-	0.950	-	-	Mlig455_034655 {REF} {Length: 2950} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=33.1]; Zinc finger, C2H2 type [PF00096.28, score=24.3]; Zinc-finger double domain [PF13465.8, score=22.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=18.8]} {Human: ENSG00000186272, ZNF17, zinc finger protein 17, [Score=73.6, Expect=9e-15]; ENSG00000083828, ZNF586, zinc finger protein 586, [Score=72.0, Expect=2e-14]; ENSG00000183309, ZNF623, zinc finger protein 623, [Score=71.6, Expect=3e-14]; ENSG00000276340, ZNF623, zinc finger protein 623, [Score=71.6, Expect=3e-14]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=70.1, Expect=1e-13]} {Mouse: ENSMUSG00000031907, Zfp90, zinc finger protein 90, [Score=70.1, Expect=8e-14]; ENSMUSG00000050846, Zfp623, zinc finger protein 623, [Score=70.1, Expect=8e-14]; ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=69.7, Expect=1e-13]; ENSMUSG00000037640, Zfp60, zinc finger protein 60, [Score=68.9, Expect=2e-13]; ENSMUSG00000034800, Zfp661, zinc finger protein 661, [Score=68.9, Expect=2e-13]; ENSMUSG00000058192, Zfp846, zinc finger protein 846, [Score=68.2, Expect=4e-13]; ENSMUSG00000063488, Zkscan7, zinc finger with KRAB and SCAN domains 7, [Score=67.8, Expect=6e-13]; ENSMUSG00000098022, Zfp82, zinc finger protein 82, [Score=67.8, Expect=5e-13]; ENSMUSG00000020420, Zfp607a, zinc finger protein 607A, [Score=67.0, Expect=1e-12]; ENSMUSG00000057093, Zfp607b, zinc finger protein 607B, [Score=67.0, Expect=1e-12]; ENSMUSG00000062519, Zfp398, zinc finger protein 398, [Score=67.0, Expect=9e-13]; ENSMUSG00000030386, Zfp606, zinc finger protein 606, [Score=66.6, Expect=2e-12]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=66.6, Expect=1e-12]} {Dmel: FBgn0038765, CG4424, [Score=52.4, Expect=6e-08]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=45.4, Expect=9e-06]} {Smed: dd_Smed_v6_15506_0_1, dd_Smed_v6_15506_0_1, [Score=54.7, Expect=3e-09]} {RNA1509_22584} {RNA1310_17539} {RNA815_4812}

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