M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_23210

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23210 178 3.71 Mlig455_061931

Neo: Germline

Age: Down-Down-Up

Region-enriched R8: 5.632/0.00003
Region-enriched R2: 4.918/0.00037

Regeneration-depleted BL: -5.208
Regeneration-depleted R2: -4.317

 Mlig455_061931 {REF} {Length: 2030} {RNA1509_56372} {RNA1310_25549, RNA1509_56372} {RNA1509_56372, RNA815_7142.1}

Cumulative graph for MligTC455_23210

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -9.997 2.558 0.00045 0.07120
RegionR2 4.918 2.558 0.00000 0.00037
RegionR3 0.46 2.558 0.64989 1.00000
RegionR4 -2.122 2.558 0.99959 1.00000
RegionR5 -1.485 2.558 0.99804 1.00000
RegionR6 0.874 2.558 0.45674 1.00000
RegionR7 1.719 2.558 0.17727 0.77192
RegionR8 5.632 2.558 0.00000 0.00003

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.197 2.558 0.99973 1.00000
RegenerationR2 -4.317 2.558 0.00001 0.00280
RegenerationR3 -1.545 2.558 0.09132 0.48791
RegenerationR4 -2.763 2.558 0.00099 0.03466
RegenerationR5 -1.873 2.558 0.02480 0.26906
RegenerationR6 -3.11 2.558 0.00319 0.06620
RegenerationBL -5.208 2.558 0.00015 0.00591
RegenerationTP -4.753 2.558 0.00035 0.02558


Genes with expression patterns similar to MligTC455_23210

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23210 178 3.71 Mlig455_061931

Neo: Germline

Age: Down-Down-Up

Region-enriched R8: 5.632/0.00003
Region-enriched R2: 4.918/0.00037

Regeneration-depleted BL: -5.208
Regeneration-depleted R2: -4.317

 4 1.000 1.000 1.000 - 1.000 - Mlig455_061931 {REF} {Length: 2030} {RNA1509_56372} {RNA1310_25549, RNA1509_56372} {RNA1509_56372, RNA815_7142.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA