TomoSeq data search

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Results for MligTC455_23230

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23230	51	1.07	Mlig455_028562, Mlig455_064749	Neo: - Age: -	CYFIP2	Mlig455_028562 {REF} {Length: 4084} {TRANSSPLICED} {Pfam: Cytoplasmic Fragile-X interacting family [PF05994.13, score=524.3]; CYRIA/CYRIB Rac1 binding domain [PF07159.14, score=30.6]} {Human: ENSG00000055163, CYFIP2, cytoplasmic FMR1 interacting protein 2, [Score=836, Expect=0.0]; ENSG00000280618, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=835, Expect=0.0]; ENSG00000273749, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=832, Expect=0.0]} {Mouse: ENSMUSG00000020340, Cyfip2, cytoplasmic FMR1 interacting protein 2, [Score=835, Expect=0.0]; ENSMUSG00000030447, Cyfip1, cytoplasmic FMR1 interacting protein 1, [Score=832, Expect=0.0]} {Dmel: FBgn0038320, Sra-1, specifically Rac1-associated protein 1, [Score=902, Expect=0.0]} {Celegans: WBGene00001579, gex-2, Cytoplasmic FMR1-interacting protein homolog, [Score=741, Expect=0.0]} {Smed: dd_Smed_v6_1814_0_1, dd_Smed_v6_1814_0_1, [Score=822, Expect=0.0]} {RNA1509_7798} {RNA1310_2031.2} {RNA815_596} Mlig455_064749 {REF} {Length: 2094} {TRANSSPLICED} {RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389} {RNA1310_32627, RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389} {RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389, RNA815_16896}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23230

1.07

Mlig455_028562, Mlig455_064749

Neo: -

Age: -

CYFIP2

Mlig455_028562 {REF} {Length: 4084} {TRANSSPLICED} {Pfam: Cytoplasmic Fragile-X interacting family [PF05994.13, score=524.3]; CYRIA/CYRIB Rac1 binding domain [PF07159.14, score=30.6]} {Human: ENSG00000055163, CYFIP2, cytoplasmic FMR1 interacting protein 2, [Score=836, Expect=0.0]; ENSG00000280618, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=835, Expect=0.0]; ENSG00000273749, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=832, Expect=0.0]} {Mouse: ENSMUSG00000020340, Cyfip2, cytoplasmic FMR1 interacting protein 2, [Score=835, Expect=0.0]; ENSMUSG00000030447, Cyfip1, cytoplasmic FMR1 interacting protein 1, [Score=832, Expect=0.0]} {Dmel: FBgn0038320, Sra-1, specifically Rac1-associated protein 1, [Score=902, Expect=0.0]} {Celegans: WBGene00001579, gex-2, Cytoplasmic FMR1-interacting protein homolog, [Score=741, Expect=0.0]} {Smed: dd_Smed_v6_1814_0_1, dd_Smed_v6_1814_0_1, [Score=822, Expect=0.0]} {RNA1509_7798} {RNA1310_2031.2} {RNA815_596}

Mlig455_064749 {REF} {Length: 2094} {TRANSSPLICED} {RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389} {RNA1310_32627, RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389} {RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389, RNA815_16896}

Cumulative graph for MligTC455_23230

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.283	1.617	0.99968	1.00000
RegionR2	0.605	1.617	0.67485	1.00000
RegionR3	2.359	1.617	0.04632	0.37656
RegionR4	1.602	1.617	0.30865	0.62275
RegionR5	1.597	1.617	0.16914	0.43714
RegionR6	0.952	1.617	0.41362	0.98198
RegionR7	-2.385	1.617	1.00000	1.00000
RegionR8	-2.445	1.617	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.629	1.617	0.99988	1.00000
RegenerationR2	4.364	1.617	0.00036	0.02542
RegenerationR3	2.84	1.617	0.00709	0.15369
RegenerationR4	2.989	1.617	0.02199	0.23633
RegenerationR5	3.301	1.617	0.00015	0.01700
RegenerationR6	3.636	1.617	0.00425	0.07843
RegenerationBL	1.927	1.617	1.00000	1.00000
RegenerationTP	6.083	1.617	0.01124	0.17994

Genes with expression patterns similar to MligTC455_23230

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23230	51	1.07	Mlig455_028562, Mlig455_064749	Neo: - Age: -	CYFIP2	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_028562 {REF} {Length: 4084} {TRANSSPLICED} {Pfam: Cytoplasmic Fragile-X interacting family [PF05994.13, score=524.3]; CYRIA/CYRIB Rac1 binding domain [PF07159.14, score=30.6]} {Human: ENSG00000055163, CYFIP2, cytoplasmic FMR1 interacting protein 2, [Score=836, Expect=0.0]; ENSG00000280618, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=835, Expect=0.0]; ENSG00000273749, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=832, Expect=0.0]} {Mouse: ENSMUSG00000020340, Cyfip2, cytoplasmic FMR1 interacting protein 2, [Score=835, Expect=0.0]; ENSMUSG00000030447, Cyfip1, cytoplasmic FMR1 interacting protein 1, [Score=832, Expect=0.0]} {Dmel: FBgn0038320, Sra-1, specifically Rac1-associated protein 1, [Score=902, Expect=0.0]} {Celegans: WBGene00001579, gex-2, Cytoplasmic FMR1-interacting protein homolog, [Score=741, Expect=0.0]} {Smed: dd_Smed_v6_1814_0_1, dd_Smed_v6_1814_0_1, [Score=822, Expect=0.0]} {RNA1509_7798} {RNA1310_2031.2} {RNA815_596} Mlig455_064749 {REF} {Length: 2094} {TRANSSPLICED} {RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389} {RNA1310_32627, RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389} {RNA1509_24559, RNA1509_26196, RNA1509_28256, RNA1509_6389, RNA815_16896}
2.	MligTC455_33816	53	1.11	Mlig455_022960	Neo: - Age: -		1.806	0.820	-	-	-	0.986	-	Mlig455_022960 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=42.7]} {RNA1509_16121, RNA1509_45218} {RNA1310_21438, RNA1509_45218} {RNA1509_45218, RNA815_8890.1}
3.	MligTC455_38846	11	0.24	Mlig455_071125	Neo: - Age: Down-Up-Down	SETMAR	0.96	-	-	-	-	0.960	-	Mlig455_071125 {REF} {Length: 2680} {Pfam: DDE superfamily endonuclease [PF13358.8, score=35.0]; Transposase (partial DDE domain) [PF01359.20, score=32.8]; HTH domain in Mos1 transposase [PF17906.3, score=29.9]; Homeodomain-like domain [PF13565.8, score=25.1]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=150, Expect=9e-41]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=68.2, Expect=2e-14]} {RNA1509_17190} {RNA1310_25865} {RNA815_362.2}
4.	MligTC455_18712	282	5.88	Mlig455_054922	Neo: - Age: - Region-enriched R6: 2.640/0.00545	NAALAD2	0.953	-	-	-	-	0.953	-	Mlig455_054922 {REF} {Length: 2408} {Pfam: Peptidase family M28 [PF04389.19, score=68.3]} {Human: ENSG00000077616, NAALAD2, N-acetylated alpha-linked acidic dipeptidase 2, [Score=197, Expect=2e-53]; ENSG00000285516, NAALAD2, N-acetylated alpha-linked acidic dipeptidase 2, [Score=197, Expect=2e-53]} {Mouse: ENSMUSG00000043943, Naalad2, N-acetylated alpha-linked acidic dipeptidase 2, [Score=186, Expect=2e-49]; ENSMUSG00000001773, Folh1, folate hydrolase 1, [Score=184, Expect=1e-48]} {Celegans: WBGene00007954, gcp-2.2, See cpr, [Score=144, Expect=9e-36]} {RNA1509_9963} {RNA1310_9839, RNA1509_9963} {RNA1509_9963, RNA815_3350}