TomoSeq data search

Data search

Results for MligTC455_23231

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23231	235	4.90	Mlig455_060940, Mlig455_060941	Neo: - Age: -	CYFIP1	Mlig455_060940 {REF} {Length: 2132} {Pfam: Cytoplasmic Fragile-X interacting family [PF05994.13, score=252.5]} {Human: ENSG00000273749, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=246, Expect=3e-72]; ENSG00000055163, CYFIP2, cytoplasmic FMR1 interacting protein 2, [Score=244, Expect=4e-72]} {Mouse: ENSMUSG00000030447, Cyfip1, cytoplasmic FMR1 interacting protein 1, [Score=247, Expect=7e-73]; ENSMUSG00000020340, Cyfip2, cytoplasmic FMR1 interacting protein 2, [Score=244, Expect=2e-72]} {Dmel: FBgn0038320, Sra-1, specifically Rac1-associated protein 1, [Score=233, Expect=6e-68]} {Celegans: WBGene00001579, gex-2, Cytoplasmic FMR1-interacting protein homolog, [Score=178, Expect=4e-49]} {Smed: dd_Smed_v6_1814_0_2, dd_Smed_v6_1814_0_2, [Score=193, Expect=1e-54]} {RNA1509_30375} {RNA1310_2031.1} {RNA815_596} Mlig455_060941 {REF} {Length: 3357} {Celegans: WBGene00018026, F35A5.4, [Score=60.5, Expect=1e-09]} {RNA1509_38620} {RNA1310_2031.2} {RNA815_14397}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23231

235

4.90

Mlig455_060940, Mlig455_060941

Neo: -

Age: -

CYFIP1

Mlig455_060940 {REF} {Length: 2132} {Pfam: Cytoplasmic Fragile-X interacting family [PF05994.13, score=252.5]} {Human: ENSG00000273749, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=246, Expect=3e-72]; ENSG00000055163, CYFIP2, cytoplasmic FMR1 interacting protein 2, [Score=244, Expect=4e-72]} {Mouse: ENSMUSG00000030447, Cyfip1, cytoplasmic FMR1 interacting protein 1, [Score=247, Expect=7e-73]; ENSMUSG00000020340, Cyfip2, cytoplasmic FMR1 interacting protein 2, [Score=244, Expect=2e-72]} {Dmel: FBgn0038320, Sra-1, specifically Rac1-associated protein 1, [Score=233, Expect=6e-68]} {Celegans: WBGene00001579, gex-2, Cytoplasmic FMR1-interacting protein homolog, [Score=178, Expect=4e-49]} {Smed: dd_Smed_v6_1814_0_2, dd_Smed_v6_1814_0_2, [Score=193, Expect=1e-54]} {RNA1509_30375} {RNA1310_2031.1} {RNA815_596}

Mlig455_060941 {REF} {Length: 3357} {Celegans: WBGene00018026, F35A5.4, [Score=60.5, Expect=1e-09]} {RNA1509_38620} {RNA1310_2031.2} {RNA815_14397}

Cumulative graph for MligTC455_23231

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.344	2.774	0.41108	1.00000
RegionR2	0.294	2.774	0.77402	1.00000
RegionR3	1.4	2.774	0.22700	0.76884
RegionR4	-0.139	2.774	0.90042	1.00000
RegionR5	0.034	2.774	0.85166	1.00000
RegionR6	0.479	2.774	0.67127	1.00000
RegionR7	0.721	2.774	0.59360	1.00000
RegionR8	1.555	2.774	0.29823	0.92803

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.953	2.774	0.99990	1.00000
RegenerationR2	0.645	2.774	0.55323	0.89505
RegenerationR3	-0.176	2.774	0.87034	1.00000
RegenerationR4	1.546	2.774	0.21242	0.65987
RegenerationR5	1.58	2.774	0.15627	0.57727
RegenerationR6	1.678	2.774	0.15431	0.48050
RegenerationBL	0.174	2.774	0.89626	1.00000
RegenerationTP	1.431	2.774	0.21724	0.66050

Genes with expression patterns similar to MligTC455_23231

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23231	235	4.9	Mlig455_060940, Mlig455_060941	Neo: - Age: -	CYFIP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060940 {REF} {Length: 2132} {Pfam: Cytoplasmic Fragile-X interacting family [PF05994.13, score=252.5]} {Human: ENSG00000273749, CYFIP1, cytoplasmic FMR1 interacting protein 1, [Score=246, Expect=3e-72]; ENSG00000055163, CYFIP2, cytoplasmic FMR1 interacting protein 2, [Score=244, Expect=4e-72]} {Mouse: ENSMUSG00000030447, Cyfip1, cytoplasmic FMR1 interacting protein 1, [Score=247, Expect=7e-73]; ENSMUSG00000020340, Cyfip2, cytoplasmic FMR1 interacting protein 2, [Score=244, Expect=2e-72]} {Dmel: FBgn0038320, Sra-1, specifically Rac1-associated protein 1, [Score=233, Expect=6e-68]} {Celegans: WBGene00001579, gex-2, Cytoplasmic FMR1-interacting protein homolog, [Score=178, Expect=4e-49]} {Smed: dd_Smed_v6_1814_0_2, dd_Smed_v6_1814_0_2, [Score=193, Expect=1e-54]} {RNA1509_30375} {RNA1310_2031.1} {RNA815_596} Mlig455_060941 {REF} {Length: 3357} {Celegans: WBGene00018026, F35A5.4, [Score=60.5, Expect=1e-09]} {RNA1509_38620} {RNA1310_2031.2} {RNA815_14397}
2.	MligTC455_33639	730	15.21	Mlig455_047657	Neo: - Age: -	TNIK	0.974	-	-	-	-	-	0.974	Mlig455_047657 {REF} {Length: 7689} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=202.9]; CNH domain [PF00780.24, score=185.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.3]; ABC1 atypical kinase-like domain [PF03109.18, score=32.8]; Fungal protein kinase [PF17667.3, score=22.8]} {Human: ENSG00000154310, TNIK, TRAF2 and NCK interacting kinase, [RH, Score=505, Expect=1e-157]; ENSG00000141503, MINK1, misshapen like kinase 1, [RH, Score=485, Expect=6e-150]} {Mouse: ENSMUSG00000027692, Tnik, TRAF2 and NCK interacting kinase, [RH, Score=506, Expect=4e-158]; ENSMUSG00000020827, Mink1, misshapen-like kinase 1 (zebrafish), [RH, Score=486, Expect=1e-150]} {Dmel: FBgn0010909, msn, misshapen, [RH, Score=508, Expect=5e-157]} {Celegans: WBGene00003247, mig-15, Serine/threonine-protein kinase mig-15, [RH, Score=499, Expect=1e-157]} {Smed: dd_Smed_v6_1029_0_1, dd_Smed_v6_1029_0_1, [RH, Score=447, Expect=2e-139]} {RNA1509_5050} {RNA1310_1736.1} {RNA815_5720.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23231

235

4.9

Mlig455_060940, Mlig455_060941

Neo: -

Age: -

CYFIP1

1.000

Mlig455_060941 {REF} {Length: 3357} {Celegans: WBGene00018026, F35A5.4, [Score=60.5, Expect=1e-09]} {RNA1509_38620} {RNA1310_2031.2} {RNA815_14397}

MligTC455_33639

730

15.21

Mlig455_047657

Neo: -

Age: -

TNIK

0.974

Mlig455_047657 {REF} {Length: 7689} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=202.9]; CNH domain [PF00780.24, score=185.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.3]; ABC1 atypical kinase-like domain [PF03109.18, score=32.8]; Fungal protein kinase [PF17667.3, score=22.8]} {Human: ENSG00000154310, TNIK, TRAF2 and NCK interacting kinase, [RH, Score=505, Expect=1e-157]; ENSG00000141503, MINK1, misshapen like kinase 1, [RH, Score=485, Expect=6e-150]} {Mouse: ENSMUSG00000027692, Tnik, TRAF2 and NCK interacting kinase, [RH, Score=506, Expect=4e-158]; ENSMUSG00000020827, Mink1, misshapen-like kinase 1 (zebrafish), [RH, Score=486, Expect=1e-150]} {Dmel: FBgn0010909, msn, misshapen, [RH, Score=508, Expect=5e-157]} {Celegans: WBGene00003247, mig-15, Serine/threonine-protein kinase mig-15, [RH, Score=499, Expect=1e-157]} {Smed: dd_Smed_v6_1029_0_1, dd_Smed_v6_1029_0_1, [RH, Score=447, Expect=2e-139]} {RNA1509_5050} {RNA1310_1736.1} {RNA815_5720.1}