TomoSeq data search

Data search

Results for MligTC455_23251

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23251

22

0.47

Mlig455_007380

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=-0.493

ZNFX1

Mlig455_007380 {REF} {Length: 6818} {Pfam: AAA domain [PF13086.8, score=56.0]; AAA domain [PF13245.8, score=27.2]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=23.9]; AAA domain [PF13604.8, score=22.7]; AAA domain [PF13401.8, score=21.6]; Bacterial TniB protein [PF05621.13, score=20.2]; Type III restriction enzyme, res subunit [PF04851.17, score=19.5]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=132, Expect=6e-31]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=127, Expect=1e-29]} {Dmel: FBgn0039165, CG6204, [Score=83.6, Expect=4e-16]} {Celegans: WBGene00014208, ZK1067.2, [Score=66.6, Expect=6e-11]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=134, Expect=8e-32]} {RNA1509_28858} {RNA1310_711} {RNA815_1324.1}

Cumulative graph for MligTC455_23251

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.889	1.059	1.00000	1.00000
RegionR2	2.605	1.059	0.17286	0.51981
RegionR3	1.008	1.059	0.48098	0.98308
RegionR4	-0.543	1.059	0.94131	1.00000
RegionR5	0.062	1.059	0.85523	1.00000
RegionR6	0.549	1.059	0.68873	1.00000
RegionR7	2.663	1.059	0.13317	0.68637
RegionR8	-1.455	1.059	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.495	1.059	1.00000	1.00000
RegenerationR2	0.94	1.059	0.50302	0.87246
RegenerationR3	2.445	1.059	0.06001	0.41714
RegenerationR4	1.554	1.059	0.23712	0.68615
RegenerationR5	1.706	1.059	0.09578	0.47409
RegenerationR6	-0.554	1.059	0.52609	0.82440
RegenerationBL	-0.544	1.059	0.99972	1.00000
RegenerationTP	-0.477	1.059	0.99984	1.00000

Genes with expression patterns similar to MligTC455_23251

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23251	22	0.47	Mlig455_007380	Neo: - Age: Up-Up-Down, logFC(26M/2M)=-0.493	ZNFX1	4	1.000	1.000	-	-	1.000	1.000	Mlig455_007380 {REF} {Length: 6818} {Pfam: AAA domain [PF13086.8, score=56.0]; AAA domain [PF13245.8, score=27.2]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=23.9]; AAA domain [PF13604.8, score=22.7]; AAA domain [PF13401.8, score=21.6]; Bacterial TniB protein [PF05621.13, score=20.2]; Type III restriction enzyme, res subunit [PF04851.17, score=19.5]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=132, Expect=6e-31]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=127, Expect=1e-29]} {Dmel: FBgn0039165, CG6204, [Score=83.6, Expect=4e-16]} {Celegans: WBGene00014208, ZK1067.2, [Score=66.6, Expect=6e-11]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=134, Expect=8e-32]} {RNA1509_28858} {RNA1310_711} {RNA815_1324.1}
2.	MligTC455_15463	64	1.33	Mlig455_034950	Neo: - Age: -	CALM1	0.99	-	-	-	-	0.990	-	Mlig455_034950 {REF} {Length: 937} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.2]; EF-hand domain [PF14658.8, score=33.0]; EF-hand domain [PF13405.8, score=27.4]; EF hand [PF00036.34, score=20.8]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=92.4, Expect=8e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=92.4, Expect=8e-24]; ENSG00000143933, CALM2, calmodulin 2, [Score=92.4, Expect=8e-24]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=92.4, Expect=5e-24]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=92.4, Expect=5e-24]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=92.4, Expect=5e-24]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=91.3, Expect=2e-23]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=92.0, Expect=7e-24]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=91.7, Expect=6e-24]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=91.7, Expect=5e-24]} {RNA1310_73371}
3.	MligTC455_23686	19	0.41	Mlig455_044097	Neo: - Age: -		0.989	-	-	-	-	0.989	-	Mlig455_044097 {REF} {Length: 4537} {Pfam: Integrase core domain [PF00665.28, score=30.3]; Integrase core domain [PF13683.8, score=18.4]} {RNA1509_31095} {RNA1310_2124} {RNA815_8382}
4.	MligTC455_09620	47	0.98	Mlig455_051588, Mlig455_051621	Neo: - Age: Down-Up-Down		0.981	-	-	-	-	-	0.981	Mlig455_051588 {REF} {Length: 2384} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=23.0]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109} Mlig455_051621 {REF} {Length: 2226} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=24.9]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109}
5.	MligTC455_27851	7	0.14	Mlig455_025984	Neo: - Age: -		0.979	-	-	-	-	0.979	-	Mlig455_025984 {REF} {Length: 1377} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=90.2]; HSP20-like domain found in ArsA [PF17886.3, score=29.4]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=1e-09]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=61.2, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=99.8, Expect=2e-24]} {RNA1509_26837} {RNA1310_48105} {RNA815_21766}
6.	MligTC455_06727	19	0.4	Mlig455_021788	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_021788 {REF} {Length: 1661} {RNA1509_31497} {RNA1310_85122} {RNA815_54556}
7.	MligTC455_21337	11	0.23	Mlig455_047767	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_047767 {REF} {Length: 4066} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
8.	MligTC455_30988	39	0.82	Mlig455_035558	Neo: - Age: logFC(26M/2M)=0.399	F5	0.961	-	-	-	-	-	0.961	Mlig455_035558 {REF} {Length: 3392} {Human: ENSG00000198734, F5, coagulation factor V, [Score=71.6, Expect=2e-12]} {RNA1509_28476} {RNA1310_33359} {RNA815_5738.1}
9.	MligTC455_34011	72	1.5	Mlig455_033063	Neo: - Age: -	KCNC1	0.957	-	-	-	-	0.957	-	Mlig455_033063 {REF} {Length: 4318} {Pfam: Ion transport protein [PF00520.33, score=148.3]; BTB/POZ domain [PF02214.24, score=101.2]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=6e-134]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=7e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=409, Expect=5e-133]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=587, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=690, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.1} {RNA815_13734}
10.	MligTC455_38544	90	1.88	Mlig455_058882	Neo: - Age: - Region-enriched R4: 4.873/0.00890		0.953	-	-	-	-	0.953	-	Mlig455_058882 {REF} {Length: 1700} {RNA1310_40211} {RNA815_8698}
11.	MligTC455_30737	10	0.22	Mlig455_059743	Neo: - Age: -	NYNRIN	0.951	-	-	-	-	0.951	-	Mlig455_059743 {REF} {Length: 4760} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=116.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=81.4]; Integrase zinc binding domain [PF17921.3, score=74.8]; Integrase core domain [PF00665.28, score=54.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.1, Expect=3e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=104, Expect=3e-22]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=392, Expect=2e-121]} {RNA1509_52755} {RNA1310_2440.1} {RNA815_21486}

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