TomoSeq data search

Data search

Results for MligTC455_23259

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23259	934	19.46	Mlig455_069745	Neo: - Age: -		Mlig455_069745 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Weak chloroplast movement under blue light [PF05701.13, score=18.2]} {RNA1509_19442} {RNA1310_12993.1} {RNA815_2932.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_23259

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.103	4.493	0.92021	1.00000
RegionR2	0.463	4.493	0.34034	0.73263
RegionR3	-0.243	4.493	0.53948	1.00000
RegionR4	-0.761	4.493	0.09871	0.30481
RegionR5	-0.688	4.493	0.06375	0.22256
RegionR6	-0.138	4.493	0.73062	1.00000
RegionR7	0.494	4.493	0.31475	0.94964
RegionR8	0.977	4.493	0.10491	0.60429

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.022	4.493	0.40400	1.00000
RegenerationR2	0.517	4.493	0.21549	0.66272
RegenerationR3	0.536	4.493	0.25390	0.68825
RegenerationR4	0.275	4.493	0.55219	0.89331
RegenerationR5	0.986	4.493	0.02736	0.28053
RegenerationR6	0.88	4.493	0.05471	0.29318
RegenerationBL	-0.117	4.493	0.82678	1.00000
RegenerationTP	-0.59	4.493	0.28891	0.73453

Genes with expression patterns similar to MligTC455_23259

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23259	934	19.46	Mlig455_069745	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_069745 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Weak chloroplast movement under blue light [PF05701.13, score=18.2]} {RNA1509_19442} {RNA1310_12993.1} {RNA815_2932.1}
2.	MligTC455_44398	552	11.5	Mlig455_034087	Neo: - Age: -	RNF121	0.964	-	-	-	0.964	-	-	Mlig455_034087 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: RING-H2 zinc finger domain [PF12678.9, score=29.5]; Ring finger domain [PF13639.8, score=27.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.8]; zinc-RING finger domain [PF14634.8, score=22.7]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=19.5]} {Human: ENSG00000137522, RNF121, ring finger protein 121, [RH, Score=424, Expect=3e-149]} {Mouse: ENSMUSG00000070426, Rnf121, ring finger protein 121, [RH, Score=423, Expect=3e-149]} {Dmel: FBgn0030873, CG15814, [RH, Score=392, Expect=2e-137]} {Celegans: WBGene00007626, rnf-121, RING finger protein 121, [RH, Score=362, Expect=2e-125]} {Smed: dd_Smed_v6_4887_0_1, dd_Smed_v6_4887_0_1, [RH, Score=452, Expect=4e-161]} {RNA1509_18705, RNA1509_19174, RNA1509_44036} {RNA1310_28434.1, RNA1509_18705, RNA1509_19174, RNA1509_44036} {RNA1509_18705, RNA1509_19174, RNA1509_44036, RNA815_13155}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23259

934

19.46

Mlig455_069745

Neo: -

Age: -

1.000

Mlig455_069745 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Weak chloroplast movement under blue light [PF05701.13, score=18.2]} {RNA1509_19442} {RNA1310_12993.1} {RNA815_2932.1}

MligTC455_44398

552

11.5

Mlig455_034087

Neo: -

Age: -

RNF121

0.964

Mlig455_034087 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: RING-H2 zinc finger domain [PF12678.9, score=29.5]; Ring finger domain [PF13639.8, score=27.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.8]; zinc-RING finger domain [PF14634.8, score=22.7]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=19.5]} {Human: ENSG00000137522, RNF121, ring finger protein 121, [RH, Score=424, Expect=3e-149]} {Mouse: ENSMUSG00000070426, Rnf121, ring finger protein 121, [RH, Score=423, Expect=3e-149]} {Dmel: FBgn0030873, CG15814, [RH, Score=392, Expect=2e-137]} {Celegans: WBGene00007626, rnf-121, RING finger protein 121, [RH, Score=362, Expect=2e-125]} {Smed: dd_Smed_v6_4887_0_1, dd_Smed_v6_4887_0_1, [RH, Score=452, Expect=4e-161]} {RNA1509_18705, RNA1509_19174, RNA1509_44036} {RNA1310_28434.1, RNA1509_18705, RNA1509_19174, RNA1509_44036} {RNA1509_18705, RNA1509_19174, RNA1509_44036, RNA815_13155}