Data search
Results for MligTC455_23261
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23261 | 334 | 6.96 | Mlig455_069744 | Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=0.528 Region-enriched R5: 1.710/0.04560 |
MCPH1 | Mlig455_069744 {REF} {Length: 5436} {Pfam: BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=49.9]; twin BRCT domain [PF12738.9, score=38.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=35.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=22.5]} {Human: ENSG00000285262, MCPH1, microcephalin 1, [RH, Score=60.1, Expect=2e-08]; ENSG00000147316, MCPH1, microcephalin 1, [RH, Score=60.1, Expect=2e-08]} {Mouse: ENSMUSG00000039842, Mcph1, microcephaly, primary autosomal recessive 1, [RH, Score=55.8, Expect=3e-07]} {Dmel: FBgn0260959, MCPH1, Microcephalin, [RH, Score=71.6, Expect=3e-12]} {Smed: dd_Smed_v6_14029_0_1, dd_Smed_v6_14029_0_1, [RH, Score=99.4, Expect=7e-21]} {RNA1509_33810, RNA1509_8517} {RNA1310_2320.1, RNA1509_33810} {RNA1509_33810, RNA815_744} |
Cumulative graph for MligTC455_23261
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.564 | 3.344 | 0.08643 | 0.63700 | |
| RegionR2 | 1.161 | 3.344 | 0.22947 | 0.60163 | |
| RegionR3 | -0.035 | 3.344 | 0.86384 | 1.00000 | |
| RegionR4 | 1.456 | 3.344 | 0.06949 | 0.24093 | |
| RegionR5 | 1.71 | 3.344 | 0.00722 | 0.04560 | |
| RegionR6 | 1.15 | 3.344 | 0.17081 | 0.72794 | |
| RegionR7 | 0.879 | 3.344 | 0.41087 | 1.00000 | |
| RegionR8 | 0.243 | 3.344 | 0.78060 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.645 | 3.344 | 0.99994 | 1.00000 | |
| RegenerationR2 | 0.812 | 3.344 | 0.10120 | 0.50254 | |
| RegenerationR3 | 1.613 | 3.344 | 0.00761 | 0.16007 | |
| RegenerationR4 | 0.327 | 3.344 | 0.56045 | 0.89702 | |
| RegenerationR5 | 0.623 | 3.344 | 0.18544 | 0.61577 | |
| RegenerationR6 | 1.363 | 3.344 | 0.01042 | 0.12620 | |
| RegenerationBL | 1.35 | 3.344 | 0.04235 | 0.23429 | |
| RegenerationTP | 0.928 | 3.344 | 0.25838 | 0.70603 |
Genes with expression patterns similar to MligTC455_23261
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23261 | 334 | 6.96 | Mlig455_069744 | Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=0.528 Region-enriched R5: 1.710/0.04560 |
MCPH1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069744 {REF} {Length: 5436} {Pfam: BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=49.9]; twin BRCT domain [PF12738.9, score=38.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=35.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=22.5]} {Human: ENSG00000285262, MCPH1, microcephalin 1, [RH, Score=60.1, Expect=2e-08]; ENSG00000147316, MCPH1, microcephalin 1, [RH, Score=60.1, Expect=2e-08]} {Mouse: ENSMUSG00000039842, Mcph1, microcephaly, primary autosomal recessive 1, [RH, Score=55.8, Expect=3e-07]} {Dmel: FBgn0260959, MCPH1, Microcephalin, [RH, Score=71.6, Expect=3e-12]} {Smed: dd_Smed_v6_14029_0_1, dd_Smed_v6_14029_0_1, [RH, Score=99.4, Expect=7e-21]} {RNA1509_33810, RNA1509_8517} {RNA1310_2320.1, RNA1509_33810} {RNA1509_33810, RNA815_744} |
| 2. | MligTC455_49140 | 1042 | 21.71 | Mlig455_010490 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.334 |
ZFR | 1.684 | - | - | 0.721 | - | - | 0.963 | Mlig455_010490 {REF} {Length: 3441} {TRANSSPLICED} {Pfam: DZF domain [PF07528.16, score=162.2]; Zinc-finger of C2H2 type [PF12874.9, score=72.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=55.5]} {Human: ENSG00000056097, ZFR, zinc finger RNA binding protein, [RH, Score=468, Expect=8e-149]} {Mouse: ENSMUSG00000022201, Zfr, zinc finger RNA binding protein, [RH, Score=466, Expect=4e-148]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [RH, Score=311, Expect=6e-92]} {Celegans: WBGene00022388, Y95B8A.8, [RH, Score=324, Expect=4e-98]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [RH, Score=501, Expect=3e-164]} {RNA1509_12494} {RNA1310_3537.1, RNA1509_12494} {RNA1509_12494, RNA815_393.1} |
| 3. | MligTC455_33788 | 326 | 6.8 | Mlig455_029355 | Neo: Irradiation Age: logFC(26M/2M)=-0.243 Region-enriched R4: 2.215/0.01251 |
ZNF420 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_029355 {REF} {Length: 2034} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=341.0]; Zinc finger, C2H2 type [PF00096.28, score=213.7]; C2H2-type zinc finger [PF13894.8, score=173.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=133.8]; C2H2-type zinc finger [PF13912.8, score=104.8]; Zinc-finger of C2H2 type [PF12874.9, score=74.1]; BED zinc finger [PF02892.17, score=36.5]; KIAA1045 RING finger [PF16744.7, score=34.8]; Family of unknown function (DUF5810) [PF19126.2, score=30.8]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=27.6]; BolA-like protein [PF01722.20, score=27.0]; Family of unknown function (DUF5830) [PF19148.2, score=24.5]; AN1-like Zinc finger [PF01428.18, score=23.6]; zinc-ribbon family [PF17032.7, score=21.2]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=20.5]; Zinc ribbon domain [PF09723.12, score=18.8]} {Human: ENSG00000197050, ZNF420, zinc finger protein 420, [Score=448, Expect=6e-151]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=441, Expect=5e-151]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=431, Expect=2e-144]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=427, Expect=2e-142]; ENSG00000196437, ZNF569, zinc finger protein 569, [Score=427, Expect=6e-145]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=427, Expect=3e-143]; ENSG00000197013, ZNF429, zinc finger protein 429, [Score=426, Expect=8e-143]} {Mouse: ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=442, Expect=4e-150]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=438, Expect=2e-145]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=437, Expect=5e-148]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=432, Expect=3e-146]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=432, Expect=3e-146]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=428, Expect=1e-145]; ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=427, Expect=1e-144]; ENSMUSG00000059975, Zfp74, zinc finger protein 74, [Score=427, Expect=6e-143]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=426, Expect=2e-139]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=420, Expect=4e-140]} {Dmel: FBgn0020309, crol, crooked legs, [Score=312, Expect=3e-96]} {Celegans: WBGene00021931, Y55F3AM.14, [RH, Score=197, Expect=7e-56]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [RH, Score=177, Expect=4e-51]} {RNA1509_7336} {RNA1310_10574} {RNA815_32782} |
| 4. | MligTC455_49497 | 210 | 4.38 | Mlig455_034328 | Neo: - Age: - |
ARMT1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_034328 {REF} {Length: 7345} {Pfam: Damage-control phosphatase ARMT1-like domain [PF01937.21, score=267.7]} {Human: ENSG00000146476, ARMT1, acidic residue methyltransferase 1, [RH, Score=222, Expect=3e-67]} {Mouse: ENSMUSG00000061759, Armt1, acidic residue methyltransferase 1, [RH, Score=219, Expect=2e-66]} {Dmel: FBgn0034689, CG2921, [Score=201, Expect=5e-59]} {Celegans: WBGene00009290, F31D4.2, [RH, Score=194, Expect=8e-57]} {Smed: dd_Smed_v6_11241_0_1, dd_Smed_v6_11241_0_1, [Score=181, Expect=5e-52]} {RNA1509_35866} {RNA1310_20337.1, RNA1509_35866} {RNA1509_35866, RNA815_24582} |
| 5. | MligTC455_45481 | 213 | 4.44 | Mlig455_041828 | Neo: - Age: - Region-enriched R5: 2.099/0.00443 |
WDR4 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_041828 {REF} {Length: 2436} {TRANSSPLICED} {Human: ENSG00000160193, WDR4, WD repeat domain 4, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000024037, Wdr4, WD repeat domain 4, [RH, Score=73.6, Expect=1e-13]} {Smed: dd_Smed_v6_11186_0_1, dd_Smed_v6_11186_0_1, [Score=80.9, Expect=1e-16]} {RNA1310_24007} {RNA815_9753} |
| 6. | MligTC455_52751 | 363 | 7.56 | Mlig455_039748 | Neo: - Age: Down-Up-Down |
0.953 | - | - | - | - | - | 0.953 | Mlig455_039748 {REF} {Length: 1589} {TRANSSPLICED} {RNA1509_34696} {RNA1310_20294.1} {RNA815_8918.1} |
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