TomoSeq data search

Data search

Results for MligTC455_23300

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23300

545

11.36

Mlig455_005186

Neo: -

Age: -

ARHGAP17

Mlig455_005186 {REF} {Length: 4451} {Pfam: RhoGAP domain [PF00620.29, score=106.8]} {Human: ENSG00000140750, ARHGAP17, Rho GTPase activating protein 17, [Score=151, Expect=6e-37]} {Mouse: ENSMUSG00000033389, Arhgap44, Rho GTPase activating protein 44, [RH, Score=148, Expect=1e-36]; ENSMUSG00000022436, Sh3bp1, SH3-domain binding protein 1, [RH, Score=144, Expect=3e-35]} {Dmel: FBgn0038747, RhoGAP92B, Rho GTPase activating protein at 92B, [RH, Score=123, Expect=2e-28]} {Celegans: WBGene00021324, Y34B4A.8, [RH, Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_10426_0_1, dd_Smed_v6_10426_0_1, [RH, Score=156, Expect=6e-39]} {RNA1509_5134} {RNA1310_10397} {RNA815_5374}

Cumulative graph for MligTC455_23300

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.472	3.839	0.69779	1.00000
RegionR2	1.043	3.839	0.04841	0.26139
RegionR3	0.472	3.839	0.23023	0.77143
RegionR4	-0.367	3.839	0.47687	0.80499
RegionR5	0.467	3.839	0.19417	0.48000
RegionR6	-0.326	3.839	0.45964	1.00000
RegionR7	-0.605	3.839	0.29961	0.93430
RegionR8	-0.212	3.839	0.75014	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.034	3.839	0.54110	1.00000
RegenerationR2	0.249	3.839	0.54146	0.88892
RegenerationR3	0.154	3.839	0.75009	0.96499
RegenerationR4	0.884	3.839	0.08228	0.45359
RegenerationR5	0.574	3.839	0.18659	0.61735
RegenerationR6	1.09	3.839	0.03305	0.22695
RegenerationBL	0.763	3.839	0.23967	0.59325
RegenerationTP	0.08	3.839	0.91203	1.00000

Genes with expression patterns similar to MligTC455_23300

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23300	545	11.36	Mlig455_005186	Neo: - Age: -	ARHGAP17	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005186 {REF} {Length: 4451} {Pfam: RhoGAP domain [PF00620.29, score=106.8]} {Human: ENSG00000140750, ARHGAP17, Rho GTPase activating protein 17, [Score=151, Expect=6e-37]} {Mouse: ENSMUSG00000033389, Arhgap44, Rho GTPase activating protein 44, [RH, Score=148, Expect=1e-36]; ENSMUSG00000022436, Sh3bp1, SH3-domain binding protein 1, [RH, Score=144, Expect=3e-35]} {Dmel: FBgn0038747, RhoGAP92B, Rho GTPase activating protein at 92B, [RH, Score=123, Expect=2e-28]} {Celegans: WBGene00021324, Y34B4A.8, [RH, Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_10426_0_1, dd_Smed_v6_10426_0_1, [RH, Score=156, Expect=6e-39]} {RNA1509_5134} {RNA1310_10397} {RNA815_5374}
2.	MligTC455_23299	547	11.39	Mlig455_005123	Neo: - Age: -		5.956	0.999	0.995	0.995	0.979	0.989	0.999	Mlig455_005123 {REF} {Length: 4923} {Pfam: RhoGAP domain [PF00620.29, score=33.1]} {Dmel: FBgn0053519, Unc-89, [Score=51.2, Expect=2e-06]} {RNA1509_29399, RNA1509_50770, RNA1509_5134} {RNA1310_10397, RNA1509_29399, RNA1509_50770} {RNA1509_29399, RNA1509_50770, RNA815_5374}
3.	MligTC455_33815	198	4.12	Mlig455_022796	Neo: - Age: -		1.771	-	-	0.821	-	-	0.950	Mlig455_022796 {REF} {Length: 2958} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=42.8]} {RNA1509_16121} {RNA1310_21438, RNA1509_16121} {RNA1509_16121, RNA815_8890.1}
4.	MligTC455_46460	1106	23.04	Mlig455_011070	Neo: Irradiation Age: -		1.766	-	0.808	-	-	-	0.958	Mlig455_011070 {REF} {Length: 1543} {Pfam: Seven in absentia protein family [PF03145.18, score=31.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.9]} {RNA1509_31346, RNA1509_9521} {RNA1310_16183.1, RNA1509_31346, RNA1509_9521} {RNA1509_31346, RNA1509_9521, RNA815_31448}
5.	MligTC455_36116	312	6.5	Mlig455_061645	Neo: Irradiation Age: Up-Down-Down		1.68	-	-	-	0.728	-	0.952	Mlig455_061645 {REF} {Length: 4713} {Pfam: Protein of unknown function (DUF2013) [PF09431.12, score=52.8]; SH3 domain [PF00018.30, score=38.1]; Variant SH3 domain [PF14604.8, score=37.3]; Variant SH3 domain [PF07653.19, score=20.7]} {Mouse: ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=49.7, Expect=9e-06]} {Dmel: FBgn0029997, CG2258, [RH, Score=117, Expect=3e-27]} {Smed: dd_Smed_v6_7468_0_1, dd_Smed_v6_7468_0_1, [Score=52.4, Expect=3e-07]} {RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002} {RNA1310_12007.1, RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002} {RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002, RNA815_4274}
6.	MligTC455_39622	339	7.06	Mlig455_006332	Neo: - Age: -	FAM91A1	0.956	-	-	-	-	-	0.956	Mlig455_006332 {REF} {Length: 4161} {TRANSSPLICED} {Pfam: FAM91 C-terminus [PF14648.8, score=404.1]; FAM91 N-terminus [PF14647.8, score=395.5]} {Human: ENSG00000176853, FAM91A1, family with sequence similarity 91 member A1, [RH, Score=667, Expect=0.0]} {Mouse: ENSMUSG00000037119, Fam91a1, family with sequence similarity 91, member A1, [RH, Score=674, Expect=0.0]; ENSMUSG00000116351, Fam91a1, family with sequence similarity 91, member A1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0064766, CG7600, [RH, Score=432, Expect=7e-138]} {Celegans: WBGene00009366, F33H2.2, [RH, Score=479, Expect=1e-157]} {Smed: dd_Smed_v6_2471_0_1, dd_Smed_v6_2471_0_1, [RH, Score=310, Expect=2e-92]} {RNA1509_26276} {RNA1310_3146} {RNA815_1984}
7.	MligTC455_15502	256	5.33	Mlig455_070463	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_070463 {REF} {Length: 3819} {TRANSSPLICED} {RNA1509_37982, RNA1509_41271} {RNA1310_6219, RNA1509_41271} {RNA1509_41271, RNA815_21865}
8.	MligTC455_37727	572	11.91	Mlig455_032714	Neo: - Age: -	CEP83	0.954	-	-	0.954	-	-	-	Mlig455_032714 {REF} {Length: 3393} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4407) [PF14362.8, score=18.9]} {Human: ENSG00000173588, CEP83, centrosomal protein 83, [RH, Score=207, Expect=4e-57]} {Mouse: ENSMUSG00000020024, Cep83, centrosomal protein 83, [RH, Score=229, Expect=3e-65]} {Smed: dd_Smed_v6_12969_0_1, dd_Smed_v6_12969_0_1, [RH, Score=211, Expect=2e-59]} {RNA1509_42929, RNA1509_6580} {RNA1310_6698.1, RNA1509_42929, RNA1509_6580} {RNA1509_42929, RNA1509_6580, RNA815_3796}

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