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Results for MligTC455_23389

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23389 173 3.61 Mlig455_071017

Neo: -

Age: Down-Down-Down

Region-specific R4: 4.024

Region-enriched R4: 3.138/0.00000

 Mlig455_071017 {REF} {Length: 3292} {Pfam: Homeodomain-like domain [PF13565.8, score=21.9]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Cumulative graph for MligTC455_23389

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.212 2.748 0.37325 1.00000
RegionR2 1.18 2.748 0.18953 0.54463
RegionR3 -0.184 2.748 0.84898 1.00000
RegionR4 3.138 2.748 0.00000 0.00000 Specific for R4: 4.024
RegionR5 -0.58 2.748 0.50547 0.86842
RegionR6 0.285 2.748 0.73323 1.00000
RegionR7 -0.347 2.748 0.79861 1.00000
RegionR8 -1.28 2.748 0.49735 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.951 2.748 0.66295 1.00000
RegenerationR2 0.87 2.748 0.14288 0.57400
RegenerationR3 1.203 2.748 0.11325 0.52700
RegenerationR4 -1.21 2.748 0.03249 0.29147
RegenerationR5 1.243 2.748 0.05838 0.38493
RegenerationR6 0.565 2.748 0.48078 0.79223
RegenerationBL 1.453 2.748 0.19770 0.53475
RegenerationTP 2.144 2.748 0.08177 0.45379


Genes with expression patterns similar to MligTC455_23389

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23389 173 3.61 Mlig455_071017

Neo: -

Age: Down-Down-Down

Region-specific R4: 4.024

Region-enriched R4: 3.138/0.00000

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_071017 {REF} {Length: 3292} {Pfam: Homeodomain-like domain [PF13565.8, score=21.9]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
2. MligTC455_23386 255 5.31 Mlig455_026946

Neo: Irradiation

Age: Down-Down-Up

Region-specific R4: 3.845

Region-enriched R4: 2.608/0.00005

 5.478 0.974 0.990 0.970 0.866 0.907 0.771 Mlig455_026946 {REF} {Length: 3126} {Pfam: Homeodomain-like domain [PF13565.8, score=21.8]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=43.5, Expect=2e-06]} {RNA1509_54267} {RNA1310_9985} {RNA815_5533.1}
3. MligTC455_23390 123 2.56 Mlig455_027034

Neo: -

Age: -

Region-specific R4: 4.237

Region-enriched R4: 2.877/0.00223

 5.402 0.950 0.982 0.979 0.849 0.794 0.848 Mlig455_027034 {REF} {Length: 2965} {Pfam: Homeodomain-like domain [PF13565.8, score=20.1]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=51.2, Expect=6e-09]} {RNA1509_54267} {RNA1310_9985} {RNA815_5533.1}
4. MligTC455_23396 160 3.34 Mlig455_042747

Neo: -

Age: Down-Down-Up

Region-specific R4: 5.331

Region-enriched R4: 2.933/0.00049

 5.327 0.964 0.984 0.908 0.938 0.759 0.774 Mlig455_042747 {REF} {Length: 1858} {Pfam: Homeodomain-like domain [PF13565.8, score=24.6]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=8e-06]} {RNA1509_54267} {RNA1310_9985} {RNA815_5533.1}
5. MligTC455_23387 661 13.78 Mlig455_012641, Mlig455_039219, Mlig455_044560

Neo: Int S/G2/M

Age: -

Region-specific R4: 4.357

Region-enriched R4: 2.845/0.00000

 5.293 0.966 0.981 0.945 0.826 0.836 0.739

Mlig455_012641 {REF} {Length: 3409} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138} {RNA1310_9985, RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138} {RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138, RNA815_5533.1}

Mlig455_039219 {REF} {Length: 2661} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Mlig455_044560 {REF} {Length: 2628} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
6. MligTC455_23385 215 4.48 Mlig455_004495

Neo: -

Age: Up-Down-Down

Region-specific R4: 4.997

Region-enriched R4: 3.186/0.00003

 5.281 0.964 0.988 0.946 0.823 0.799 0.761 Mlig455_004495 {REF} {Length: 2364} {Pfam: Homeodomain-like domain [PF13565.8, score=21.7]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=6e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
7. MligTC455_23392 150 3.13 Mlig455_038970

Neo: -

Age: -

Region-specific R4: 6.409

Region-enriched R4: 3.786/0.00001

 4.365 0.958 0.988 0.928 0.740 - 0.751 Mlig455_038970 {REF} {Length: 1284} {Pfam: Homeodomain-like domain [PF13565.8, score=21.8]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=43.5, Expect=2e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
8. MligTC455_07824 62 1.29 Mlig455_062727

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.060/0.00566

 4.363 0.919 0.983 0.951 - 0.726 0.784 Mlig455_062727 {REF} {Length: 1470} {NoTransDecoderORF} {RNA1509_14257} {RNA1310_58593} {RNA815_21085.1}
9. MligTC455_24426 260 5.41 Mlig455_001476, Mlig455_006840, Mlig455_006902, Mlig455_055103, Mlig455_055149

Neo: Germline

Age: logFC(26M/2M)=0.491

Region-specific R4: 7.022

Region-enriched R4: 8.137/0.00000

 4.333 0.874 0.972 0.951 - 0.774 0.762

Mlig455_001476 {REF} {Length: 1393} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_39896.2} {RNA815_33608}

Mlig455_006840 {REF} {Length: 1356} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_44250} {RNA815_33608}

Mlig455_006902 {REF} {Length: 723} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_37253} {RNA815_16973}

Mlig455_055103 {REF} {Length: 2635} {Pfam: Winged helix-turn helix [PF13551.8, score=31.5]; DDE superfamily endonuclease [PF13358.8, score=29.2]; Homeodomain-like domain [PF13384.8, score=27.2]; Helix-turn-helix domain [PF13518.8, score=26.7]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.5]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=63.9, Expect=3e-12]} {RNA1509_42119} {RNA1310_44250} {RNA815_33608}

Mlig455_055149 {REF} {Length: 1470} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_44250} {RNA815_16973}
10. MligTC455_21777 298 6.21 Mlig455_028207, Mlig455_063571

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.714

 4.332 0.906 0.965 0.952 - 0.756 0.753

Mlig455_028207 {REF} {Length: 1710} {RNA1509_42567, RNA1509_7932} {RNA1310_29963, RNA1509_42567, RNA1509_7932} {RNA1509_42567, RNA1509_7932, RNA815_28272}

Mlig455_063571 {REF} {Length: 1693} {RNA1509_42567} {RNA1310_29963} {RNA815_28272}
11. MligTC455_07016 48 1.01 Mlig455_069269

Neo: Germline

Age: -

 4.257 0.892 0.961 0.875 - 0.768 0.761 Mlig455_069269 {REF} {Length: 549} {TRANSSPLICED} {RNA1509_59261} {RNA1310_56270, RNA1509_59261} {RNA1509_59261, RNA815_30228}
12. MligTC455_11854 112 2.32 Mlig455_057286

Neo: Irradiation

Age: -

Region-specific R4: 6.358

Region-enriched R4: 5.060/0.00000

 4.247 0.893 0.988 0.858 - 0.744 0.764 Mlig455_057286 {REF} {Length: 793} {RNA1509_33398} {RNA1310_24396.1} {RNA815_21615}
13. MligTC455_12198 82 1.72 Mlig455_054302

Neo: Germline

Age: -

Region-specific R4: 6.290

Region-enriched R4: 3.889/0.00401

 4.242 0.869 0.961 0.946 - 0.711 0.755 Mlig455_054302 {REF} {Length: 1253} {RNA1509_45595} {RNA1310_55802} {RNA815_29152}
14. MligTC455_14867 241 5.02 Mlig455_000599

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.558

Region-enriched R4: 2.939/0.00075

 4.21 0.941 0.950 0.801 - 0.764 0.754 Mlig455_000599 {REF} {Length: 1388} {RNA1509_23571} {RNA1310_38169} {RNA815_28435.1}
15. MligTC455_14868 200 4.17 Mlig455_030329

Neo: Germline

Age: -

Region-specific R4: 6.971

Region-enriched R4: 2.943/0.03814

 4.167 0.826 0.954 0.866 - 0.773 0.748 Mlig455_030329 {REF} {Length: 187} {NoTransDecoderORF} {RNA1509_23571} {RNA1310_58943} {RNA815_50089}
16. MligTC455_13514 53 1.1 Mlig455_010467

Neo: Germline

Age: Down-Down-Down, logFC(26M/2M)=-1.228

 4.162 0.973 0.800 0.789 - 0.862 0.738 Mlig455_010467 {REF} {Length: 1212} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=49.7]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=92.4, Expect=1e-23]} {RNA1509_29748} {RNA1310_27208} {RNA815_13547.2}
17. MligTC455_27103 78 1.63 Mlig455_005338, Mlig455_006418

Neo: -

Age: -

Region-enriched R4: 3.778/0.00120

 4.141 0.866 0.958 - 0.791 0.773 0.753

Mlig455_005338 {REF} {Length: 1348} {TRANSSPLICED} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=30.8]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=46.6, Expect=3e-06]} {RNA1509_56237} {RNA1310_26348.2} {RNA815_26049}

Mlig455_006418 {REF} {Length: 3677} {RNA1509_35846} {RNA1310_9600.1} {RNA815_3985.1}
18. MligTC455_50797 68 1.41 Mlig455_017800

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.732

Region-enriched R4: 4.948/0.00001

 NEFM 4.117 0.904 0.984 0.801 - 0.727 0.701 Mlig455_017800 {REF} {Length: 2914} {Human: ENSG00000104722, NEFM, neurofilament medium, [RH, Score=55.5, Expect=3e-07]} {RNA1509_16831, RNA1509_43018} {RNA1310_7404, RNA1509_43018} {RNA1509_43018, RNA815_2824.1}
19. MligTC455_14792 105 2.2 Mlig455_047705

Neo: Irradiation

Age: -

Region-specific R4: 6.591

 TMEM30A 4.107 0.961 0.963 0.738 - 0.706 0.739 Mlig455_047705 {REF} {Length: 2656} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=78.5]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000022753, Tmem30c, transmembrane protein 30C, [Score=65.5, Expect=1e-11]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [Score=63.5, Expect=6e-11]} {Dmel: FBgn0030752, CG9947, [Score=72.4, Expect=5e-14]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=68.9, Expect=6e-13]} {Smed: dd_Smed_v6_22194_0_1, dd_Smed_v6_22194_0_1, [Score=63.9, Expect=2e-11]} {RNA1509_17463} {RNA1310_10723} {RNA815_9781}
20. MligTC455_14791 116 2.41 Mlig455_014400

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.458

Region-specific R4: 6.782

Region-enriched R4: 3.738/0.01843

 TMEM30A 4.075 0.961 0.968 0.738 - 0.702 0.706 Mlig455_014400 {REF} {Length: 3042} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=179.8]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [Score=124, Expect=3e-31]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [Score=127, Expect=1e-32]} {Dmel: FBgn0030752, CG9947, [Score=134, Expect=2e-35]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=122, Expect=5e-31]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=129, Expect=9e-34]} {RNA1509_17463, RNA1509_52829} {RNA1310_10723, RNA1509_17463, RNA1509_52829} {RNA1509_17463, RNA1509_52829, RNA815_9781}
21. MligTC455_10689 294 6.13 Mlig455_004212

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.123

Region-enriched R4: 4.804/0.00000

Regeneration-downregulated R4: -2.854

Regeneration-depleted R4: -2.854

 4.061 0.895 0.981 0.730 0.701 - 0.754 Mlig455_004212 {REF} {Length: 1139} {Pfam: Rdx family [PF10262.11, score=20.0]} {RNA1509_7187} {RNA1310_33606, RNA1509_7187} {RNA1509_7187, RNA815_15969}
22. MligTC455_07329 168 3.5 Mlig455_052748

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.476

Region-enriched R4: 3.160/0.02274

 3.67 0.928 0.942 0.953 - - 0.847 Mlig455_052748 {REF} {Length: 3761} {RNA1509_24720, RNA1509_29201, RNA1509_43756, RNA1509_56021} {RNA1310_3574, RNA1509_24720, RNA1509_29201, RNA1509_43756, RNA1509_56021} {RNA1509_24720, RNA1509_29201, RNA1509_43756, RNA1509_56021, RNA815_4011}
23. MligTC455_49748 492 10.25 Mlig455_011517, Mlig455_011595

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.828

Region-enriched R4: 2.304/0.01187

 ARPC4-TTLL3 3.644 0.970 0.961 0.944 - - 0.769

Mlig455_011517 {REF} {Length: 3213} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=90.5]; YheC/D like ATP-grasp [PF14398.8, score=20.1]} {Human: ENSG00000250151, ARPC4-TTLL3, ARPC4-TTLL3 readthrough, [Score=55.8, Expect=2e-07]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=55.8, Expect=1e-07]; ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=54.3, Expect=7e-07]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=55.1, Expect=3e-07]; ENSMUSG00000038756, Ttll6, tubulin tyrosine ligase-like family, member 6, [Score=53.5, Expect=1e-06]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=67.0, Expect=2e-11]} {RNA1509_13905} {RNA1310_500} {RNA815_1534}

Mlig455_011595 {REF} {Length: 3209} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=90.5]; YheC/D like ATP-grasp [PF14398.8, score=19.6]} {Human: ENSG00000250151, ARPC4-TTLL3, ARPC4-TTLL3 readthrough, [Score=56.2, Expect=2e-07]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=56.2, Expect=2e-07]; ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=55.5, Expect=3e-07]; ENSMUSG00000038756, Ttll6, tubulin tyrosine ligase-like family, member 6, [Score=53.9, Expect=9e-07]} {Smed: dd_Smed_v6_11158_0_1, dd_Smed_v6_11158_0_1, [Score=67.4, Expect=2e-11]} {RNA1509_13905, RNA1509_4934} {RNA1310_500, RNA1509_13905, RNA1509_4934} {RNA1509_13905, RNA1509_4934, RNA815_1534}
24. MligTC455_24794 303 6.3 Mlig455_021633, Mlig455_021686

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.296

Region-specific R4: 7.227

Region-enriched R4: 4.321/0.00000

 3.629 0.967 0.976 0.940 - - 0.746

Mlig455_021633 {REF} {Length: 3836} {RNA1509_50179, RNA1509_8555} {RNA1310_2773, RNA1509_50179} {RNA1509_50179, RNA815_7241}

Mlig455_021686 {REF} {Length: 3869} {RNA1509_8555} {RNA1310_2773, RNA1509_8555} {RNA1509_8555, RNA815_7241}
25. MligTC455_40206 86 1.78 Mlig455_059439

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.689

Region-enriched R4: 2.922/0.02473

 3.62 0.907 0.989 0.948 - - 0.776 Mlig455_059439 {REF} {Length: 1940} {RNA1509_20476, RNA1509_54675} {RNA1310_19483, RNA1509_54675} {RNA1509_54675, RNA815_26243}
26. MligTC455_31566 395 8.22 Mlig455_015818

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.427

Region-enriched R4: 3.499/0.00000

 3.616 0.950 0.976 0.933 - - 0.757 Mlig455_015818 {REF} {Length: 3013} {RNA1509_3240} {RNA1310_3886} {RNA815_25776}
27. MligTC455_31567 788 16.42 Mlig455_015826, Mlig455_023660

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.553

Region-enriched R4: 3.520/0.00000

 3.612 0.951 0.974 0.931 - - 0.756

Mlig455_015826 {REF} {Length: 3545} {RNA1509_3240} {RNA1310_3886} {RNA815_13006}

Mlig455_023660 {REF} {Length: 3908} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.4]} {RNA1509_3240} {RNA1310_3886, RNA1509_3240} {RNA1509_3240, RNA815_13006}
28. MligTC455_39143 955 19.91 Mlig455_016855, Mlig455_070016

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.515

Region-specific R4: 5.834

Region-enriched R4: 3.480/0.00000

 KCNMA1 3.603 0.951 0.967 0.942 - - 0.743

Mlig455_016855 {REF} {Length: 4022} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=66.2]; Ion channel [PF07885.18, score=40.0]; Ion transport protein [PF00520.33, score=38.2]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=238, Expect=2e-63]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=240, Expect=2e-64]; ENSMUSG00000031576, Kcnu1, potassium channel, subfamily U, member 1, [Score=233, Expect=4e-62]} {Dmel: FBgn0003429, slo, slowpoke, [Score=284, Expect=6e-79]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=251, Expect=4e-68]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=241, Expect=4e-65]} {RNA1509_4621} {RNA1310_2410} {RNA815_675.1}

Mlig455_070016 {REF} {Length: 4126} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=65.9]; Ion channel [PF07885.18, score=39.9]; Ion transport protein [PF00520.33, score=37.1]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=269, Expect=4e-73]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=268, Expect=2e-73]} {Dmel: FBgn0003429, slo, slowpoke, [Score=303, Expect=4e-85]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=275, Expect=7e-76]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=261, Expect=1e-71]} {RNA1509_44055, RNA1509_495, RNA1509_6276} {RNA1310_2410, RNA1509_44055, RNA1509_495, RNA1509_6276} {RNA1509_44055, RNA1509_495, RNA1509_6276, RNA815_675.1}
29. MligTC455_05293 44 0.91 Mlig455_016323

Neo: -

Age: -

 3.6 0.953 0.986 0.922 - - 0.739 Mlig455_016323 {REF} {Length: 732} {NoTransDecoderORF} {RNA1509_48191} {RNA1310_47921} {RNA815_39328}
30. MligTC455_23395 295 6.14 Mlig455_043321, Mlig455_071004

Neo: -

Age: -

Region-specific R4: 6.346

Region-enriched R4: 3.305/0.00025

 3.6 0.955 0.986 0.921 - - 0.738

Mlig455_043321 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Mlig455_071004 {REF} {Length: 980} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
31. MligTC455_30377 273 5.69 Mlig455_033345, Mlig455_033366

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.788

Region-enriched R4: 4.455/0.00000

 3.597 0.937 0.953 0.956 - - 0.751

Mlig455_033345 {REF} {Length: 2468} {TRANSSPLICED} {Pfam: Glycine rich protein family [PF07172.13, score=21.1]} {RNA1509_36435} {RNA1310_42062.1} {RNA815_26947}

Mlig455_033366 {REF} {Length: 2476} {Pfam: Glycine rich protein family [PF07172.13, score=23.1]} {RNA1509_36435} {RNA1310_42062.1, RNA1509_36435} {RNA1509_36435, RNA815_26947}
32. MligTC455_13585 510 10.62 Mlig455_025444, Mlig455_025451

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.403

Region-specific R4: 5.989

Region-enriched R4: 3.044/0.00000

 3.596 0.932 0.988 0.954 - - 0.722

Mlig455_025444 {REF} {Length: 1962} {RNA1509_37933, RNA1509_8059} {RNA1310_20766, RNA1509_37933} {RNA1509_37933, RNA815_5932}

Mlig455_025451 {REF} {Length: 1994} {RNA1509_37683, RNA1509_8059} {RNA1310_20766, RNA1509_37683, RNA1509_8059} {RNA1509_37683, RNA1509_8059, RNA815_5932}
33. MligTC455_11796 138 2.88 Mlig455_001870, Mlig455_001944

Neo: Germline

Age: Up-Down-Down

 3.588 0.883 0.964 0.930 - - 0.811

Mlig455_001870 {REF} {Length: 1821} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=18.0]} {RNA1310_14341} {RNA815_12963}

Mlig455_001944 {REF} {Length: 2646} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=17.7]} {RNA1310_14341} {RNA815_12963}
34. MligTC455_25315 74 1.53 Mlig455_013645

Neo: Germline

Age: -

Region-specific R4: 6.811

Region-enriched R4: 4.898/0.00005

 3.585 0.906 0.987 0.941 - - 0.751 Mlig455_013645 {REF} {Length: 2359} {RNA1509_42340} {RNA1310_25317, RNA1509_42340} {RNA1509_42340, RNA815_28783}
35. MligTC455_07612 327 6.81 Mlig455_037469

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.342

Region-specific R4: 6.516

Region-enriched R4: 2.453/0.00921

 PLD1 3.582 0.962 0.936 0.942 - - 0.742 Mlig455_037469 {REF} {Length: 5789} {Pfam: Phospholipase D Active site motif [PF00614.24, score=47.7]; PLD-like domain [PF13091.8, score=38.9]} {Human: ENSG00000075651, PLD1, phospholipase D1, [Score=227, Expect=4e-60]} {Mouse: ENSMUSG00000027695, Pld1, phospholipase D1, [Score=228, Expect=2e-60]} {Dmel: FBgn0033075, Pld, Phospholipase D, [Score=209, Expect=3e-54]} {Celegans: WBGene00004040, pld-1, PhosphoLipase D; Phospholipase D, [Score=205, Expect=7e-53]} {Smed: dd_Smed_v6_61149_0_1, dd_Smed_v6_61149_0_1, [RH, Score=241, Expect=5e-70]} {RNA1509_3353} {RNA1310_956.1} {RNA815_8085}
36. MligTC455_39141 478 9.95 Mlig455_016842

Neo: Int S/G2/M

Age: Up-Down-Up

Region-specific R4: 6.544

Region-enriched R4: 3.819/0.00000

 KCNU1 3.58 0.958 0.962 0.914 - - 0.746 Mlig455_016842 {REF} {Length: 2579} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=67.2]} {Human: ENSG00000215262, KCNU1, potassium calcium-activated channel subfamily U member 1, [Score=99.4, Expect=1e-20]} {Mouse: ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=63.2, Expect=1e-09]; ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=62.0, Expect=2e-09]} {Dmel: FBgn0003429, slo, slowpoke, [Score=95.9, Expect=7e-20]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=84.3, Expect=2e-16]} {Smed: dd_Smed_v6_17366_0_2, dd_Smed_v6_17366_0_2, [Score=133, Expect=4e-32]} {RNA1509_4621} {RNA1310_3199} {RNA815_675.1}
37. MligTC455_22751 394 8.22 Mlig455_007254, Mlig455_007345, Mlig455_015861, Mlig455_036587, Mlig455_038600, Mlig455_041298, Mlig455_053849, Mlig455_060441, Mlig455_062435, Mlig455_064129

Neo: Germline

Age: -

Region-specific R4: 6.359

Region-enriched R4: 4.764/0.00000

 3.578 0.935 0.964 0.921 - - 0.758

Mlig455_007254 {REF} {Length: 229} {NoTransDecoderORF} {RNA1509_32832} {RNA1310_45085} {RNA815_26718}

Mlig455_007345 {REF} {Length: 588} {RNA1509_32444} {RNA1310_45085} {RNA815_23145.2}

Mlig455_015861 {REF} {Length: 1094} {RNA1509_32444} {RNA1310_29966} {RNA815_23145.3}

Mlig455_036587 {REF} {Length: 676} {Pfam: Phage integrase family [PF00589.24, score=32.8]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_038600 {REF} {Length: 1396} {Pfam: Phage integrase family [PF00589.24, score=32.3]; Domain of unknown function (DUF3504) [PF12012.10, score=25.5]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_041298 {REF} {Length: 449} {Pfam: THAP domain [PF05485.14, score=35.9]} {RNA1509_32832} {RNA1310_28735} {RNA815_22569.1}

Mlig455_053849 {REF} {Length: 1396} {Pfam: Phage integrase family [PF00589.24, score=32.3]; Domain of unknown function (DUF3504) [PF12012.10, score=25.5]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_060441 {REF} {Length: 784} {RNA1509_32444} {RNA1310_41193} {RNA815_23145.3}

Mlig455_062435 {REF} {Length: 6496} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=108.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=108.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.5]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=116, Expect=2e-31]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_064129 {REF} {Length: 1025} {NoTransDecoderORF} {RNA1509_32832} {RNA1310_112433} {RNA815_11263}
38. MligTC455_06212 40 0.84 Mlig455_060579

Neo: Germline

Age: Up-Down-Up

Region-enriched R4: 5.420/0.00393

 3.577 0.951 0.950 0.951 - - 0.725 Mlig455_060579 {REF} {Length: 1326} {RNA1509_48102} {RNA1310_24234.1, RNA1509_48102} {RNA1509_48102, RNA815_9984}
39. MligTC455_09741 291 6.06 Mlig455_046341, Mlig455_068236

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 6.975

Region-enriched R4: 5.663/0.00058

 3.577 0.914 0.918 0.963 - - 0.782

Mlig455_046341 {REF} {Length: 743} {RNA1509_42826} {RNA1310_64147} {RNA815_52510}

Mlig455_068236 {REF} {Length: 1219} {RNA1509_40236, RNA1509_42826} {RNA1310_64147, RNA1509_40236, RNA1509_42826} {RNA1509_40236, RNA1509_42826, RNA815_52510}
40. MligTC455_09468 270 5.63 Mlig455_030764, Mlig455_030806

Neo: -

Age: Up-Down-Up

Region-specific R4: 6.384

 PRR9 3.576 0.913 0.962 0.958 - - 0.743

Mlig455_030764 {REF} {Length: 432} {RNA1509_34666} {RNA1310_96435} {RNA815_49891}

Mlig455_030806 {REF} {Length: 4283} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=4e-06]} {RNA1509_32949, RNA1509_34666} {RNA1310_96435, RNA1509_32949, RNA1509_34666} {RNA1509_32949, RNA1509_34666, RNA815_49891}
41. MligTC455_36524 311 6.48 Mlig455_055930

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.152

Region-enriched R4: 2.537/0.01048

 3.574 0.924 0.959 0.928 - - 0.763 Mlig455_055930 {REF} {Length: 2412} {RNA1509_22317} {RNA1310_9520.1, RNA1509_22317} {RNA1509_22317, RNA815_3615.1}
42. MligTC455_33465 184 3.84 Mlig455_015592

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.335

Region-specific R4: 6.019

Region-enriched R4: 3.801/0.00296

 ATP6V0A4 3.573 0.926 0.979 0.935 - - 0.733 Mlig455_015592 {REF} {Length: 4675} {Pfam: V-type ATPase 116kDa subunit family [PF01496.21, score=438.4]} {Human: ENSG00000105929, ATP6V0A4, ATPase H+ transporting V0 subunit a4, [Score=285, Expect=1e-82]; ENSG00000185344, ATP6V0A2, ATPase H+ transporting V0 subunit a2, [Score=285, Expect=2e-82]; ENSG00000033627, ATP6V0A1, ATPase H+ transporting V0 subunit a1, [Score=277, Expect=7e-80]} {Mouse: ENSMUSG00000019302, Atp6v0a1, ATPase, H+ transporting, lysosomal V0 subunit A1, [Score=294, Expect=4e-86]; ENSMUSG00000038600, Atp6v0a4, ATPase, H+ transporting, lysosomal V0 subunit A4, [Score=282, Expect=6e-82]} {Dmel: FBgn0028670, Vha100-2, Vacuolar H[+] ATPase 100kD subunit 2, [Score=300, Expect=1e-88]} {Celegans: WBGene00006914, vha-5, V-type proton ATPase subunit a, [Score=275, Expect=3e-79]} {Smed: dd_Smed_v6_4805_0_1, dd_Smed_v6_4805_0_1, [Score=298, Expect=5e-88]} {RNA1509_24348} {RNA1310_4759, RNA1509_24348} {RNA1509_24348, RNA815_5389}
43. MligTC455_43943 467 9.74 Mlig455_060925, Mlig455_060991

Neo: Germline

Age: -

Region-specific R4: 5.833

Region-enriched R4: 3.138/0.02489

 3.572 0.899 0.978 0.941 - - 0.754

Mlig455_060925 {REF} {Length: 1918} {Mouse: ENSMUSG00000045350, Fam186a, family with sequence similarity 186, member A, [Score=60.8, Expect=9e-10]} {RNA1509_12541} {RNA1310_42885} {RNA815_20280.1}

Mlig455_060991 {REF} {Length: 1707} {Pfam: WSC domain [PF01822.21, score=49.9]} {Mouse: ENSMUSG00000045350, Fam186a, family with sequence similarity 186, member A, [Score=66.6, Expect=4e-11]} {RNA1509_12541} {RNA1310_42885} {RNA815_20280.1}
44. MligTC455_24457 166 3.47 Mlig455_062455

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.483

Region-specific R4: 5.934

Region-enriched R4: 3.452/0.00087

 3.572 0.831 0.953 0.912 - - 0.876 Mlig455_062455 {REF} {Length: 2941} {RNA1509_34362} {RNA1310_23548, RNA1509_34362} {RNA1509_34362, RNA815_9843}
45. MligTC455_13808 155 3.23 Mlig455_034941

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.085

Region-enriched R4: 3.769/0.00009

 NLGN4Y 3.571 0.921 0.962 0.930 - - 0.758 Mlig455_034941 {REF} {Length: 3017} {Pfam: Carboxylesterase family [PF00135.30, score=88.0]} {Human: ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [Score=65.9, Expect=2e-10]; ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [Score=65.5, Expect=3e-10]; ENSG00000172831, CES2, carboxylesterase 2, [Score=63.5, Expect=9e-10]} {Mouse: ENSMUSG00000063887, Nlgn1, neuroligin 1, [Score=62.8, Expect=1e-09]; ENSMUSG00000069922, Ces3a, carboxylesterase 3A, [Score=62.0, Expect=2e-09]; ENSMUSG00000050097, Ces2b, carboxyesterase 2B, [Score=61.6, Expect=2e-09]; ENSMUSG00000062181, Ces3b, carboxylesterase 3B, [Score=60.8, Expect=4e-09]; ENSMUSG00000062826, Ces2f, carboxylesterase 2F, [Score=60.5, Expect=5e-09]; ENSMUSG00000061825, Ces2c, carboxylesterase 2C, [Score=60.5, Expect=5e-09]; ENSMUSG00000051790, Nlgn2, neuroligin 2, [Score=60.5, Expect=7e-09]} {Dmel: FBgn0032057, CG9287, [Score=68.9, Expect=9e-12]} {Celegans: WBGene00017478, F15A8.6, Carboxylic ester hydrolase, [Score=73.2, Expect=3e-13]} {Smed: dd_Smed_v6_14790_0_1, dd_Smed_v6_14790_0_1, [Score=63.5, Expect=2e-10]} {RNA1509_21813, RNA1509_49812, RNA1509_52450} {RNA1310_5544.2, RNA1509_21813, RNA1509_49812, RNA1509_52450} {RNA1509_21813, RNA1509_49812, RNA1509_52450, RNA815_2570}
46. MligTC455_50918 226 4.71 Mlig455_006863

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.415

Region-enriched R4: 3.697/0.00000

 3.571 0.902 0.988 0.929 - - 0.752 Mlig455_006863 {REF} {Length: 1310} {RNA1509_32284, RNA1509_44655} {RNA1310_28031.1, RNA1509_32284, RNA1509_44655} {RNA1509_32284, RNA1509_44655, RNA815_13214.1}
47. MligTC455_11232 94 1.95 Mlig455_023098

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.902

Region-specific R4: 6.287

Region-enriched R4: 4.229/0.00014

 3.57 0.931 0.984 0.897 - - 0.758 Mlig455_023098 {REF} {Length: 657} {RNA1509_22816} {RNA1310_44682} {RNA815_26712}
48. MligTC455_21104 474 9.87 Mlig455_033050, Mlig455_044108

Neo: Germline

Age: -

Region-specific R4: 6.422

Region-enriched R4: 4.217/0.00098

 3.568 0.932 0.975 0.865 - - 0.796

Mlig455_033050 {REF} {Length: 1279} {RNA1509_52743} {RNA1310_48254.1} {RNA815_26651}

Mlig455_044108 {REF} {Length: 1967} {RNA1509_32468, RNA1509_52743} {RNA1310_48254.1, RNA1509_32468, RNA1509_52743} {RNA1509_32468, RNA1509_52743, RNA815_26651}
49. MligTC455_07241 697 14.52 Mlig455_010028, Mlig455_054073, Mlig455_063290

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.635

Region-enriched R4: 3.640/0.00058

 3.566 0.959 0.898 0.940 - - 0.769

Mlig455_010028 {REF} {Length: 1638} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=98.2, Expect=4e-23]} {RNA1509_9016} {RNA1310_21253} {RNA815_8561}

Mlig455_054073 {REF} {Length: 1742} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=98.2, Expect=4e-23]} {RNA1509_9016} {RNA1310_21253} {RNA815_8561}

Mlig455_063290 {REF} {Length: 1660} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=99.4, Expect=2e-23]} {RNA1509_38447, RNA1509_9016} {RNA1310_21253, RNA1509_38447, RNA1509_9016} {RNA1509_38447, RNA1509_9016, RNA815_8561}
50. MligTC455_45799 137 2.85 Mlig455_010358

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.769

 CUL1 3.564 0.960 0.972 0.926 - - 0.706 Mlig455_010358 {REF} {Length: 2732} {Pfam: Cullin family [PF00888.24, score=111.1]; Cullin protein neddylation domain [PF10557.11, score=35.8]} {Human: ENSG00000055130, CUL1, cullin 1, [Score=52.0, Expect=4e-06]} {Mouse: ENSMUSG00000029686, Cul1, cullin 1, [Score=52.0, Expect=3e-06]} {Smed: dd_Smed_v6_5770_0_1, dd_Smed_v6_5770_0_1, [Score=62.4, Expect=7e-10]} {RNA1509_15365} {RNA1310_6541} {RNA815_7517}
51. MligTC455_54173 117 2.44 Mlig455_033140

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.139

 3.563 0.934 0.963 0.903 - - 0.763 Mlig455_033140 {REF} {Length: 2614} {RNA1509_21301, RNA1509_22305, RNA1509_36694} {RNA1310_14403, RNA1509_22305, RNA1509_36694} {RNA1509_22305, RNA1509_36694, RNA815_5347}
52. MligTC455_11654 101 2.1 Mlig455_007138

Neo: Germline

Age: -

Region-specific R4: 6.665

Region-enriched R4: 5.098/0.00001

 3.562 0.933 0.973 0.894 - - 0.762 Mlig455_007138 {REF} {Length: 1163} {RNA1509_44532} {RNA1310_27904.2} {RNA815_23946.1}
53. MligTC455_45753 150 3.13 Mlig455_067991

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R4: 4.383/0.00566

 3.559 0.951 0.964 0.886 - - 0.758 Mlig455_067991 {REF} {Length: 2324} {RNA1509_21018} {RNA1310_1264.1, RNA1509_21018} {RNA1509_21018, RNA815_18745}
54. MligTC455_24119 132 2.75 Mlig455_040160

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.022

 KREMEN2 3.558 0.968 0.974 0.848 - - 0.768 Mlig455_040160 {REF} {Length: 2105} {Pfam: WSC domain [PF01822.21, score=44.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=53.5, Expect=1e-08]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=51.2, Expect=6e-08]} {RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993} {RNA1310_23240, RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993} {RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993, RNA815_20861}
55. MligTC455_31704 269 5.61 Mlig455_054838

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.691

Region-enriched R4: 3.425/0.00037

 3.558 0.959 0.956 0.879 - - 0.764 Mlig455_054838 {REF} {Length: 2194} {RNA1509_41474} {RNA1310_13049.1, RNA1509_41474} {RNA1509_41474, RNA815_3850.1}
56. MligTC455_27089 171 3.56 Mlig455_015007

Neo: Germline

Age: -

Region-specific R4: 5.070

Region-enriched R4: 3.820/0.00012

 3.557 0.913 0.964 0.908 - - 0.772 Mlig455_015007 {REF} {Length: 2788} {RNA1509_28630} {RNA1310_21930.1} {RNA815_9792}
57. MligTC455_48798 526 10.97 Mlig455_051450

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.177

Region-enriched R4: 2.379/0.00002

 ZDHHC14 3.557 0.928 0.964 0.864 - - 0.801 Mlig455_051450 {REF} {Length: 1389} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=120.5]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=209, Expect=2e-63]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=213, Expect=9e-65]} {Dmel: FBgn0260941, app, approximated, [Score=199, Expect=1e-60]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=155, Expect=9e-44]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=190, Expect=3e-57]} {RNA1509_36754, RNA1509_52631} {RNA1310_23949.1, RNA1509_36754, RNA1509_52631} {RNA1509_36754, RNA1509_52631, RNA815_9887.1}
58. MligTC455_20012 305 6.36 Mlig455_016785, Mlig455_016805

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.261

Region-enriched R4: 5.131/0.00000

 3.556 0.876 0.987 0.950 - - 0.743

Mlig455_016785 {REF} {Length: 1241} {Pfam: Transmembrane domain of transglycosylase PBP1 at N-terminal [PF14812.8, score=20.9]} {RNA1509_18738} {RNA1310_6737.1} {RNA815_3362}

Mlig455_016805 {REF} {Length: 1297} {Pfam: Transmembrane domain of transglycosylase PBP1 at N-terminal [PF14812.8, score=20.3]} {RNA1509_18738} {RNA1310_6737.1, RNA1509_18738} {RNA1509_18738, RNA815_3362}
59. MligTC455_10165 180 3.75 Mlig455_010194, Mlig455_058694

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.661

Region-enriched R4: 3.345/0.03003

 3.554 0.946 0.958 0.884 - - 0.766

Mlig455_010194 {REF} {Length: 1334} {RNA1509_33844} {RNA1310_50327} {RNA815_17489}

Mlig455_058694 {REF} {Length: 1370} {RNA1509_33844, RNA1509_41444} {RNA1310_50327, RNA1509_33844, RNA1509_41444} {RNA1509_33844, RNA1509_41444, RNA815_17489}
60. MligTC455_12191 94 1.96 Mlig455_012125

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.545

Region-specific R4: 5.976

Region-enriched R4: 4.701/0.00002

 3.552 0.926 0.973 0.915 - - 0.738 Mlig455_012125 {REF} {Length: 1537} {Pfam: Ion channel [PF07885.18, score=38.7]} {RNA1509_49272} {RNA1310_22746} {RNA815_12762}
61. MligTC455_48799 1057 22.02 Mlig455_007337, Mlig455_066655

Neo: Irradiation

Age: -

Region-specific R4: 4.167

Region-enriched R4: 2.282/0.00136

 ZDHHC14 3.552 0.928 0.964 0.860 - - 0.800

Mlig455_007337 {REF} {Length: 1352} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=119.2]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=183, Expect=2e-53]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=178, Expect=1e-52]; ENSG00000204160, ZDHHC18, zinc finger DHHC-type containing 18, [Score=174, Expect=4e-51]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=186, Expect=8e-55]; ENSMUSG00000036985, Zdhhc9, zinc finger, DHHC domain containing 9, [Score=179, Expect=5e-53]; ENSMUSG00000037553, Zdhhc18, zinc finger, DHHC domain containing 18, [Score=179, Expect=4e-53]} {Dmel: FBgn0260941, app, approximated, [Score=179, Expect=4e-53]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=141, Expect=1e-38]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=168, Expect=4e-49]} {RNA1509_46564} {RNA1310_23949.1} {RNA815_9887.2}

Mlig455_066655 {REF} {Length: 1391} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=121.1]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=209, Expect=5e-63]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=200, Expect=5e-61]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=212, Expect=2e-64]} {Dmel: FBgn0260941, app, approximated, [Score=203, Expect=6e-62]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=154, Expect=2e-43]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=186, Expect=2e-55]} {RNA1509_46564} {RNA1310_23949.1, RNA1509_46564} {RNA1509_46564, RNA815_9887.1}
62. MligTC455_10830 366 7.63 Mlig455_019653, Mlig455_048055, Mlig455_048075

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.268

Region-specific R4: 6.596

Region-enriched R4: 5.277/0.00003

 3.551 0.956 0.962 0.868 - - 0.765

Mlig455_019653 {REF} {Length: 2478} {RNA1509_31954} {RNA1310_9515.1} {RNA815_20880}

Mlig455_048055 {REF} {Length: 2719} {RNA1509_31954} {RNA1310_9015} {RNA815_20880}

Mlig455_048075 {REF} {Length: 2358} {RNA1509_31954} {RNA1310_9515.1} {RNA815_20880}
63. MligTC455_21286 447 9.31 Mlig455_004286, Mlig455_004360

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.448

Region-specific R4: 5.908

Region-enriched R4: 2.387/0.01220

 3.551 0.865 0.985 0.935 - - 0.766

Mlig455_004286 {REF} {Length: 1958} {RNA1509_28807, RNA1509_44927} {RNA1310_15297.1, RNA1509_44927} {RNA1509_44927, RNA815_30441}

Mlig455_004360 {REF} {Length: 1833} {RNA1509_28807} {RNA1310_15297.1} {RNA815_37116}
64. MligTC455_17272 391 8.14 Mlig455_025736, Mlig455_025765, Mlig455_064426

Neo: Germline

Age: logFC(26M/2M)=0.555

Region-specific R4: 4.939

Region-enriched R4: 2.762/0.00014

 3.55 0.959 0.988 0.860 - - 0.743

Mlig455_025736 {REF} {Length: 2555} {TRANSSPLICED} {RNA1509_28700, RNA1509_39620} {RNA1310_9149, RNA1509_28700, RNA1509_39620} {RNA1509_28700, RNA1509_39620, RNA815_11141}

Mlig455_025765 {REF} {Length: 2544} {TRANSSPLICED} {RNA1509_39620} {RNA1310_9149} {RNA815_11141}

Mlig455_064426 {REF} {Length: 2543} {TRANSSPLICED} {RNA1509_39620} {RNA1310_9149} {RNA815_11141}
65. MligTC455_26663 213 4.43 Mlig455_047277

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.168

Region-enriched R4: 3.586/0.00008

 3.55 0.887 0.981 0.918 - - 0.764 Mlig455_047277 {REF} {Length: 1312} {RNA1509_29739} {RNA1310_23273} {RNA815_11477}
66. MligTC455_36525 306 6.37 Mlig455_068194

Neo: Germline

Age: Down-Up-Up

Region-specific R4: 6.010

Region-enriched R4: 2.432/0.01953

 3.548 0.910 0.961 0.913 - - 0.764 Mlig455_068194 {REF} {Length: 1755} {RNA1509_25400} {RNA1310_9520.2} {RNA815_1650.1}
67. MligTC455_40300 336 7.01 Mlig455_045772

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 5.562

Region-enriched R4: 3.553/0.00003

 3.548 0.828 0.975 0.928 - - 0.817 Mlig455_045772 {REF} {Length: 940} {Pfam: Cysteine rich repeat [PF02363.21, score=21.7]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=50.1, Expect=2e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=55.8, Expect=1e-09]} {RNA1509_24106} {RNA1310_19688} {RNA815_36314}
68. MligTC455_07609 814 16.96 Mlig455_065903, Mlig455_070028

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.357

Region-enriched R4: 2.291/0.00800

 A1CF 3.547 0.920 0.966 0.795 - - 0.866

Mlig455_065903 {REF} {Length: 4282} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=8e-146]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=3e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=5e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=445, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1}

Mlig455_070028 {REF} {Length: 4546} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=1e-145]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=2e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=4e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=444, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1}
69. MligTC455_25427 318 6.63 Mlig455_035602

Neo: -

Age: Up-Down-Down

Region-specific R4: 5.854

Region-enriched R4: 4.807/0.00000

Regeneration-downregulated R4: -2.147

Regeneration-depleted R4: -2.147

 FNDC3A 3.547 0.884 0.958 0.930 - - 0.775 Mlig455_035602 {REF} {Length: 4739} {TRANSSPLICED} {Pfam: Fibronectin type III domain [PF00041.23, score=265.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=71.0]; Neuron-derived neurotrophic factor [PF10179.11, score=29.7]} {Human: ENSG00000102531, FNDC3A, fibronectin type III domain containing 3A, [Score=473, Expect=2e-144]} {Mouse: ENSMUSG00000033487, Fndc3a, fibronectin type III domain containing 3A, [Score=481, Expect=1e-147]} {Dmel: FBgn0259735, CG42389, [Score=325, Expect=3e-91]} {Celegans: WBGene00006759, unc-22, Twitchin, [Score=124, Expect=3e-28]} {Smed: dd_Smed_v6_4612_0_1, dd_Smed_v6_4612_0_1, [Score=615, Expect=0.0]} {RNA1509_12208} {RNA1310_1469} {RNA815_8671}
70. MligTC455_51000 198 4.12 Mlig455_049960

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.562

Region-enriched R4: 4.208/0.00007

 3.546 0.870 0.988 0.928 - - 0.760 Mlig455_049960 {REF} {Length: 1570} {RNA1509_26603} {RNA1310_40732.3, RNA1509_26603} {RNA1509_26603, RNA815_27303.1}
71. MligTC455_26664 214 4.47 Mlig455_069338

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.110

Region-enriched R4: 3.398/0.00008

 3.545 0.888 0.983 0.909 - - 0.765 Mlig455_069338 {REF} {Length: 1180} {RNA1509_30850} {RNA1310_23273} {RNA815_11477}
72. MligTC455_20107 225 4.68 Mlig455_005578

Neo: Germline

Age: -

Region-specific R4: 6.149

Region-enriched R4: 4.181/0.00006

 3.545 0.941 0.955 0.882 - - 0.767 Mlig455_005578 {REF} {Length: 858} {RNA1509_59132, RNA1509_9647} {RNA1310_44291, RNA1509_59132} {RNA1509_59132, RNA815_20934}
73. MligTC455_17300 93 1.93 Mlig455_025267

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.363

Region-enriched R4: 4.578/0.00028

 3.544 0.865 0.969 0.948 - - 0.762 Mlig455_025267 {REF} {Length: 1469} {Pfam: EF hand [PF00036.34, score=18.9]} {RNA1509_16117} {RNA1310_22629} {RNA815_11563}
74. MligTC455_27749 592 12.34 Mlig455_040035

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.363

Region-enriched R4: 2.856/0.00000

 3.544 0.965 0.891 0.903 - - 0.785 Mlig455_040035 {REF} {Length: 2943} {RNA1509_4854} {RNA1310_7525} {RNA815_7627}
75. MligTC455_32000 89 1.84 Mlig455_065403

Neo: Germline

Age: Down-Down-Up

Region-enriched R4: 4.171/0.00009

 FKRP 3.544 0.912 0.967 0.935 - - 0.730 Mlig455_065403 {REF} {Length: 4520} {Pfam: LicD family [PF04991.15, score=59.9]} {Human: ENSG00000181027, FKRP, fukutin related protein, [Score=48.1, Expect=1e-05]} {Mouse: ENSMUSG00000048920, Fkrp, fukutin related protein, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_22064_0_1, dd_Smed_v6_22064_0_1, [Score=103, Expect=3e-25]} {RNA1509_48974} {RNA1310_21292} {RNA815_8600.1}
76. MligTC455_49827 112 2.32 Mlig455_032074

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 3.433/0.03025

 TUBA1C 3.542 0.918 0.981 0.898 - - 0.745 Mlig455_032074 {REF} {Length: 1788} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=217.5]; Tubulin C-terminal domain [PF03953.19, score=171.6]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=755, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=753, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=752, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=752, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=751, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=744, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=741, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=731, Expect=0.0]} {Mouse: ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=756, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=753, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=752, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=752, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=751, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=744, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=731, Expect=0.0]} {Dmel: FBgn0003886, alphaTub85E, alpha-Tubulin at 85E, [Score=744, Expect=0.0]} {Celegans: WBGene00006530, tba-4, Tubulin alpha chain, [Score=732, Expect=0.0]} {Smed: dd_Smed_v6_648_0_1, dd_Smed_v6_648_0_1, [Score=721, Expect=0.0]} {RNA1509_11310, RNA1509_45259} {RNA1310_16392.1, RNA1509_45259} {RNA1509_45259, RNA815_6652}
77. MligTC455_09129 32 0.66 Mlig455_059421

Neo: Germline

Age: -

Region-enriched R4: 5.564/0.00001

 3.542 0.860 0.989 0.943 - - 0.750 Mlig455_059421 {REF} {Length: 741} {RNA1509_46948} {RNA1310_47642} {RNA815_53017}
78. MligTC455_11423 415 8.65 Mlig455_005060

Neo: -

Age: Up-Down-Up

Region-specific R4: 6.406

Region-enriched R4: 4.720/0.00014

 3.541 0.871 0.979 0.929 - - 0.762 Mlig455_005060 {REF} {Length: 1169} {Pfam: Thioredoxin [PF00085.22, score=45.3]} {RNA1509_26647} {RNA1310_42837} {RNA815_27656.1}
79. MligTC455_15775 2350 48.97 Mlig455_029535, Mlig455_043005, Mlig455_043043

Neo: Germline

Age: logFC(26M/2M)=0.309

Region-specific R4: 5.743

Region-enriched R4: 4.046/0.00000

 LSM14A 3.54 0.911 0.962 0.917 - - 0.750

Mlig455_029535 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: Scd6-like Sm domain [PF12701.9, score=92.6]; Ataxin 2 SM domain [PF14438.8, score=34.7]} {Human: ENSG00000257103, LSM14A, LSM14A, mRNA processing body assembly factor, [Score=100, Expect=5e-23]; ENSG00000262860, LSM14A, LSM14A, mRNA processing body assembly factor, [Score=100, Expect=9e-23]; ENSG00000149657, LSM14B, LSM family member 14B, [Score=97.4, Expect=4e-22]} {Mouse: ENSMUSG00000066568, Lsm14a, LSM14A mRNA processing body assembly factor, [Score=99.4, Expect=5e-22]; ENSMUSG00000039108, Lsm14b, LSM family member 14B, [Score=96.3, Expect=2e-21]} {Dmel: FBgn0041775, tral, trailer hitch, [Score=96.3, Expect=5e-21]} {Celegans: WBGene00012484, car-1, Cytokinesis, Apoptosis, RNA-associated, [Score=95.5, Expect=1e-21]} {Smed: dd_Smed_v6_1125_0_1, dd_Smed_v6_1125_0_1, [Score=100, Expect=7e-23]} {RNA1509_7025} {RNA1310_10905} {RNA815_11621}

Mlig455_043005 {REF} {Length: 2614} {TRANSSPLICED} {Pfam: Scd6-like Sm domain [PF12701.9, score=92.5]; Ataxin 2 SM domain [PF14438.8, score=34.6]} {Human: ENSG00000257103, LSM14A, LSM14A, mRNA processing body assembly factor, [Score=101, Expect=1e-22]; ENSG00000262860, LSM14A, LSM14A, mRNA processing body assembly factor, [Score=101, Expect=1e-22]; ENSG00000149657, LSM14B, LSM family member 14B, [Score=97.8, Expect=8e-23]} {Mouse: ENSMUSG00000066568, Lsm14a, LSM14A mRNA processing body assembly factor, [Score=99.4, Expect=4e-22]; ENSMUSG00000039108, Lsm14b, LSM family member 14B, [Score=97.1, Expect=2e-21]} {Dmel: FBgn0041775, tral, trailer hitch, [Score=96.7, Expect=5e-21]} {Celegans: WBGene00012484, car-1, Cytokinesis, Apoptosis, RNA-associated, [Score=95.5, Expect=2e-21]} {Smed: dd_Smed_v6_1125_0_1, dd_Smed_v6_1125_0_1, [Score=100, Expect=7e-23]} {RNA1509_7025} {RNA1310_10905} {RNA815_11621}

Mlig455_043043 {REF} {Length: 2012} {TRANSSPLICED} {Pfam: Scd6-like Sm domain [PF12701.9, score=92.5]; Ataxin 2 SM domain [PF14438.8, score=34.6]} {Human: ENSG00000262860, LSM14A, LSM14A, mRNA processing body assembly factor, [Score=101, Expect=1e-22]; ENSG00000257103, LSM14A, LSM14A, mRNA processing body assembly factor, [Score=101, Expect=1e-22]; ENSG00000149657, LSM14B, LSM family member 14B, [Score=97.4, Expect=4e-22]} {Mouse: ENSMUSG00000066568, Lsm14a, LSM14A mRNA processing body assembly factor, [Score=99.4, Expect=5e-22]; ENSMUSG00000039108, Lsm14b, LSM family member 14B, [Score=96.3, Expect=3e-21]} {Dmel: FBgn0041775, tral, trailer hitch, [Score=96.7, Expect=5e-21]} {Celegans: WBGene00012484, car-1, Cytokinesis, Apoptosis, RNA-associated, [Score=95.5, Expect=2e-21]} {Smed: dd_Smed_v6_1125_0_1, dd_Smed_v6_1125_0_1, [Score=100, Expect=7e-23]} {RNA1509_7025} {RNA1310_10905} {RNA815_11621}
80. MligTC455_28875 232 4.83 Mlig455_042410, Mlig455_042421

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.396

Region-enriched R4: 4.484/0.00000

 3.535 0.932 0.985 0.860 - - 0.758

Mlig455_042410 {REF} {Length: 1958} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=33.1]} {RNA1509_39955} {RNA1310_12615.4} {RNA815_10094.1}

Mlig455_042421 {REF} {Length: 2235} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=33.1]} {RNA1509_39955} {RNA1310_12615.4} {RNA815_10094.1}
81. MligTC455_28304 360 7.5 Mlig455_039819, Mlig455_067988

Neo: Germline

Age: Down-Down-Down

Region-specific R4: 5.355

Region-enriched R4: 3.130/0.00049

 3.535 0.953 0.955 0.751 - 0.876 -

Mlig455_039819 {REF} {Length: 642} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51681} {RNA1310_928.1} {RNA815_529.1}

Mlig455_067988 {REF} {Length: 5022} {RNA1509_51631, RNA1509_51681} {RNA1310_928.1, RNA1509_51631, RNA1509_51681} {RNA1509_51631, RNA1509_51681, RNA815_529.1}
82. MligTC455_16601 1066 22.2 Mlig455_006194, Mlig455_059281, Mlig455_065219

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.505

Region-enriched R4: 5.045/0.00000

 CHMP4B 3.53 0.920 0.990 0.879 - - 0.741

Mlig455_006194 {REF} {Length: 1268} {Pfam: Snf7 [PF03357.23, score=144.9]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=163, Expect=6e-50]; ENSG00000254692, AL136295.1, novel protein, [Score=158, Expect=4e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=158, Expect=4e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=162, Expect=7e-50]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=8e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=160, Expect=2e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=169, Expect=6e-53]} {RNA1509_33100, RNA1509_7427} {RNA1310_28383, RNA1509_33100, RNA1509_7427} {RNA1509_33100, RNA1509_7427, RNA815_12898}

Mlig455_059281 {REF} {Length: 1249} {Pfam: Snf7 [PF03357.23, score=144.9]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=163, Expect=6e-50]; ENSG00000254692, AL136295.1, novel protein, [Score=158, Expect=4e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=158, Expect=4e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=162, Expect=7e-50]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=8e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=160, Expect=2e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=169, Expect=6e-53]} {RNA1509_29106, RNA1509_7427} {RNA1310_28383, RNA1509_29106} {RNA1509_29106, RNA815_12898}

Mlig455_065219 {REF} {Length: 1267} {Pfam: Snf7 [PF03357.23, score=144.3]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=161, Expect=3e-49]; ENSG00000254692, AL136295.1, novel protein, [Score=159, Expect=1e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=159, Expect=1e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=160, Expect=3e-49]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=6e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=159, Expect=9e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=168, Expect=1e-52]} {RNA1509_7427} {RNA1310_28383} {RNA815_12898}
83. MligTC455_10188 158 3.29 Mlig455_036444, Mlig455_054350

Neo: Germline

Age: Down-Up-Up, logFC(26M/2M)=0.507

Region-specific R4: 7.341

Region-enriched R4: 6.229/0.00000

 3.526 0.882 0.985 0.902 - - 0.757

Mlig455_036444 {REF} {Length: 707} {Pfam: Dickkopf N-terminal cysteine-rich region [PF04706.14, score=19.7]; Family of unknown function (DUF5885) [PF19232.1, score=19.4]} {RNA1509_54511} {RNA1310_63890, RNA1509_54511} {RNA1509_54511, RNA815_33000}

Mlig455_054350 {REF} {Length: 619} {Pfam: Dickkopf N-terminal cysteine-rich region [PF04706.14, score=18.9]; Family of unknown function (DUF5885) [PF19232.1, score=18.4]} {RNA1509_54511} {RNA1310_63890} {RNA815_33000}
84. MligTC455_08868 56 1.17 Mlig455_065532

Neo: Germline

Age: Up-Down-Up, logFC(26M/2M)=1.802

Region-enriched R4: 6.299/0.00003

 3.525 0.895 0.987 0.880 - - 0.763 Mlig455_065532 {REF} {Length: 1143} {RNA1509_9730} {RNA1310_27510, RNA1509_9730} {RNA1509_9730, RNA815_10425}
85. MligTC455_06080 118 2.45 Mlig455_028177, Mlig455_028248

Neo: Germline

Age: -

Region-specific R4: 6.764

Region-enriched R4: 3.549/0.00010

 3.523 0.877 0.965 0.907 - - 0.774

Mlig455_028177 {REF} {Length: 841} {NoTransDecoderORF} {RNA1509_56870} {RNA1310_45405} {RNA815_31063}

Mlig455_028248 {REF} {Length: 886} {RNA1509_51247, RNA1509_56870} {RNA1310_45405, RNA1509_51247, RNA1509_56870} {RNA1509_51247, RNA1509_56870, RNA815_31063}
86. MligTC455_02574 196 4.08 Mlig455_066808, Mlig455_066876

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 6.519

Region-enriched R4: 4.354/0.01595

 SLC6A14 3.523 0.906 0.963 0.907 - - 0.747

Mlig455_066808 {REF} {Length: 2422} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=38.7]} {Human: ENSG00000268104, SLC6A14, solute carrier family 6 member 14, [Score=65.1, Expect=3e-10]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=50.4, Expect=7e-06]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=66.2, Expect=4e-11]} {RNA1509_23501, RNA1509_53682} {RNA1310_1618, RNA1509_23501, RNA1509_53682} {RNA1509_23501, RNA1509_53682, RNA815_8086}

Mlig455_066876 {REF} {Length: 1152} {RNA1509_23501} {RNA1310_1618} {RNA815_6997}
87. MligTC455_11121 333 6.94 Mlig455_028351, Mlig455_066139

Neo: Irradiation

Age: -

Region-specific R4: 4.889

Region-enriched R4: 4.003/0.00031

 3.522 0.960 0.967 0.832 - - 0.763

Mlig455_028351 {REF} {Length: 2483} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=40.4]} {RNA1509_14469} {RNA1310_14926.1} {RNA815_4212}

Mlig455_066139 {REF} {Length: 1457} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=41.1]} {RNA1509_14469} {RNA1310_14926.1} {RNA815_4212}
88. MligTC455_25425 2935 61.16 Mlig455_016585, Mlig455_016642, Mlig455_035591, Mlig455_051882

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.203

Region-enriched R4: 4.362/0.00000

Regeneration-downregulated TP: -7.622

Regeneration-depleted TP: -7.622

 3.522 0.903 0.961 0.924 - - 0.734

Mlig455_016585 {REF} {Length: 1031} {RNA1509_2024} {RNA1310_10624, RNA1509_2024} {RNA1509_2024, RNA815_8671}

Mlig455_016642 {REF} {Length: 933} {RNA1509_2024} {RNA1310_10624} {RNA815_8671}

Mlig455_035591 {REF} {Length: 1029} {RNA1509_2024} {RNA1310_10624} {RNA815_8671}

Mlig455_051882 {REF} {Length: 926} {RNA1509_2024} {RNA1310_10624} {RNA815_8671}
89. MligTC455_31443 223 4.65 Mlig455_051505

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.613

 PDE7A 3.521 0.892 0.974 0.891 - - 0.764 Mlig455_051505 {REF} {Length: 2631} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=171.1]} {Human: ENSG00000205268, PDE7A, phosphodiesterase 7A, [Score=140, Expect=9e-36]; ENSG00000171408, PDE7B, phosphodiesterase 7B, [Score=137, Expect=2e-34]} {Mouse: ENSMUSG00000019990, Pde7b, phosphodiesterase 7B, [Score=140, Expect=4e-36]; ENSMUSG00000069094, Pde7a, phosphodiesterase 7A, [Score=139, Expect=2e-35]} {Dmel: FBgn0000479, dnc, dunce, [Score=117, Expect=2e-27]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=107, Expect=2e-24]} {Smed: dd_Smed_v6_20355_0_1, dd_Smed_v6_20355_0_1, [Score=161, Expect=1e-44]} {RNA1509_7223} {RNA1310_12032.1} {RNA815_6602.1}
90. MligTC455_41886 216 4.51 Mlig455_004189

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.687

Region-enriched R4: 4.532/0.00001

 3.521 0.908 0.969 0.904 - - 0.740 Mlig455_004189 {REF} {Length: 2965} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=75.9, Expect=4e-15]} {RNA1509_16009, RNA1509_43368} {RNA1310_21432, RNA1509_43368} {RNA1509_43368, RNA815_11018}
91. MligTC455_45879 536 11.16 Mlig455_051497

Neo: Germline

Age: -

Region-specific R4: 5.877

Region-enriched R4: 3.090/0.00004

 3.521 0.927 0.954 0.828 - - 0.812 Mlig455_051497 {REF} {Length: 1005} {RNA1509_32432} {RNA1310_57772} {RNA815_9436.1}
92. MligTC455_49606 678 14.12 Mlig455_029318

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 3.068

Region-enriched R4: 2.452/0.00000

Regeneration-downregulated R4: -1.768

Regeneration-depleted R4: -1.768

 PTPN1 3.52 0.902 0.972 - 0.934 - 0.712 Mlig455_029318 {REF} {Length: 2843} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=114.6]} {Human: ENSG00000196396, PTPN1, protein tyrosine phosphatase, non-receptor type 1, [Score=163, Expect=1e-45]} {Mouse: ENSMUSG00000027540, Ptpn1, protein tyrosine phosphatase, non-receptor type 1, [Score=166, Expect=1e-46]} {Dmel: FBgn0267487, Ptp61F, Protein tyrosine phosphatase 61F, [Score=159, Expect=9e-44]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=115, Expect=2e-28]} {Smed: dd_Smed_v6_5710_0_1, dd_Smed_v6_5710_0_1, [Score=133, Expect=1e-34]} {RNA1509_26526, RNA1509_27049} {RNA1310_5562, RNA1509_26526, RNA1509_27049} {RNA1509_26526, RNA1509_27049, RNA815_1820}
93. MligTC455_19104 914 19.05 Mlig455_026788, Mlig455_051802

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.346

Region-enriched R4: 4.421/0.00010

 3.52 0.912 0.954 0.891 - - 0.763

Mlig455_026788 {REF} {Length: 742} {RNA1509_17733} {RNA1310_50147} {RNA815_24619}

Mlig455_051802 {REF} {Length: 1000} {RNA1509_17733, RNA1509_20087, RNA1509_31043} {RNA1310_50147, RNA1509_17733, RNA1509_20087, RNA1509_31043} {RNA1509_17733, RNA1509_20087, RNA1509_31043, RNA815_24619}
94. MligTC455_40422 1018 21.21 Mlig455_070603

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.334

Region-enriched R4: 3.177/0.00000

 HNRNPA2B1 3.52 0.941 0.966 0.843 - - 0.770 Mlig455_070603 {REF} {Length: 2590} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=116.6]; RNA recognition motif [PF16367.7, score=33.7]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [RH, Score=208, Expect=1e-62]; ENSG00000170144, HNRNPA3, heterogeneous nuclear ribonucleoprotein A3, [RH, Score=207, Expect=2e-62]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [RH, Score=205, Expect=5e-62]; ENSG00000139675, HNRNPA1L2, heterogeneous nuclear ribonucleoprotein A1-like 2, [RH, Score=199, Expect=2e-59]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [RH, Score=208, Expect=7e-63]; ENSMUSG00000059005, Hnrnpa3, heterogeneous nuclear ribonucleoprotein A3, [RH, Score=207, Expect=8e-63]; ENSMUSG00000092086, Gm6793, predicted gene 6793, [RH, Score=206, Expect=7e-62]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [RH, Score=205, Expect=8e-62]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [RH, Score=206, Expect=1e-61]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [RH, Score=204, Expect=2e-61]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [RH, Score=266, Expect=1e-86]} {RNA1509_17671, RNA1509_54540, RNA1509_55768, RNA1509_9045, RNA1509_992} {RNA1310_8362, RNA1509_17671, RNA1509_54540, RNA1509_55768, RNA1509_9045, RNA1509_992} {RNA1509_17671, RNA1509_54540, RNA1509_55768, RNA1509_9045, RNA1509_992, RNA815_14748}
95. MligTC455_31267 218 4.55 Mlig455_048585, Mlig455_048666, Mlig455_051622

Neo: -

Age: -

Region-specific R4: 6.688

Region-enriched R4: 4.506/0.00000
Region-enriched R3: 2.803/0.03006

 3.52 0.856 0.981 0.939 - - 0.744

Mlig455_048585 {REF} {Length: 4575} {RNA1509_41432, RNA1509_52877} {RNA1310_5058.1, RNA1509_41432} {RNA1509_41432, RNA815_30060}

Mlig455_048666 {REF} {Length: 1528} {RNA1509_57689} {RNA1310_57587} {RNA815_30060}

Mlig455_051622 {REF} {Length: 919} {RNA1509_57689} {RNA1310_57587, RNA1509_57689} {RNA1509_57689, RNA815_30060}
96. MligTC455_39761 647 13.47 Mlig455_024290, Mlig455_052374

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.715

Region-enriched R4: 2.642/0.00146

 3.52 0.861 0.988 0.935 - - 0.736

Mlig455_024290 {REF} {Length: 3013} {RNA1509_4400} {RNA1310_11247, RNA1509_4400} {RNA1509_4400, RNA815_11511}

Mlig455_052374 {REF} {Length: 2915} {RNA1509_4400} {RNA1310_11247} {RNA815_11511}
97. MligTC455_09287 81 1.69 Mlig455_049385

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.698

Region-enriched R4: 5.447/0.00000

 3.519 0.903 0.958 0.950 - - 0.708 Mlig455_049385 {REF} {Length: 3112} {Pfam: Transmembrane protein 55A [PF09788.11, score=29.5]} {RNA1509_15757, RNA1509_24853, RNA1509_50688} {RNA1310_20137, RNA1509_15757, RNA1509_24853, RNA1509_50688} {RNA1509_15757, RNA1509_24853, RNA1509_50688, RNA815_10105}
98. MligTC455_39072 115 2.4 Mlig455_054642, Mlig455_054648, Mlig455_057644

Neo: Germline

Age: Up-Up-Down, logFC(26M/2M)=0.745

Region-specific R4: 7.162

Region-enriched R4: 6.040/0.00000

 3.519 0.875 0.964 0.942 - - 0.738

Mlig455_054642 {REF} {Length: 1551} {Pfam: Tetraspanin family [PF00335.22, score=35.9]} {RNA1310_33145} {RNA815_11307}

Mlig455_054648 {REF} {Length: 1557} {Pfam: Tetraspanin family [PF00335.22, score=35.9]} {RNA1310_33145} {RNA815_11307}

Mlig455_057644 {REF} {Length: 1551} {Pfam: Tetraspanin family [PF00335.22, score=35.9]} {RNA1310_33145} {RNA815_11307}
99. MligTC455_14681 354 7.38 Mlig455_039610

Neo: Irradiation

Age: Up-Down-Up

Region-specific R4: 5.889

Region-enriched R4: 3.229/0.02310

 3.517 0.933 0.989 0.837 - - 0.758 Mlig455_039610 {REF} {Length: 848} {RNA1509_10622} {RNA1310_47546} {RNA815_23842}
100. MligTC455_32341 289 6.03 Mlig455_056565

Neo: Irradiation

Age: -

Region-specific R4: 6.178

Region-enriched R4: 3.257/0.00020

 3.517 0.922 0.980 0.851 - - 0.764 Mlig455_056565 {REF} {Length: 2089} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1}

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