Data search
Results for MligTC455_23404
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23404 | 305 | 6.35 | Mlig455_068081 | Neo: Germline Age: - |
CNOT6 | Mlig455_068081 {REF} {Length: 2445} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=83.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; Leucine rich repeat [PF13855.8, score=41.9]; Leucine Rich repeat [PF13516.8, score=21.0]; Leucine Rich Repeat [PF00560.35, score=19.4]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=434, Expect=9e-146]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=419, Expect=5e-140]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=436, Expect=6e-147]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=429, Expect=3e-144]} {Dmel: FBgn0011725, twin, [Score=451, Expect=9e-153]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=417, Expect=4e-139]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=412, Expect=2e-137]} {RNA1509_8779} {RNA1310_6379, RNA1509_8779} {RNA1509_8779, RNA815_3181} |
Cumulative graph for MligTC455_23404
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.357 | 3.322 | 0.82423 | 1.00000 | |
| RegionR2 | 0.241 | 3.322 | 0.70811 | 1.00000 | |
| RegionR3 | -0.499 | 3.322 | 0.37532 | 0.90864 | |
| RegionR4 | 1.178 | 3.322 | 0.02096 | 0.10550 | |
| RegionR5 | 0.84 | 3.322 | 0.04597 | 0.17649 | |
| RegionR6 | -0.43 | 3.322 | 0.45565 | 1.00000 | |
| RegionR7 | 0.064 | 3.322 | 0.93384 | 1.00000 | |
| RegionR8 | -1.038 | 3.322 | 0.42255 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.343 | 3.322 | 0.87514 | 1.00000 | |
| RegenerationR2 | 0.513 | 3.322 | 0.26993 | 0.71593 | |
| RegenerationR3 | 0.409 | 3.322 | 0.46643 | 0.84161 | |
| RegenerationR4 | 0.14 | 3.322 | 0.76759 | 0.97582 | |
| RegenerationR5 | 0.023 | 3.322 | 0.95633 | 1.00000 | |
| RegenerationR6 | -0.06 | 3.322 | 0.91756 | 1.00000 | |
| RegenerationBL | -0.401 | 3.322 | 0.67716 | 1.00000 | |
| RegenerationTP | 1.393 | 3.322 | 0.10513 | 0.50208 |
Genes with expression patterns similar to MligTC455_23404
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23404 | 305 | 6.35 | Mlig455_068081 | Neo: Germline Age: - |
CNOT6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_068081 {REF} {Length: 2445} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=83.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; Leucine rich repeat [PF13855.8, score=41.9]; Leucine Rich repeat [PF13516.8, score=21.0]; Leucine Rich Repeat [PF00560.35, score=19.4]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=434, Expect=9e-146]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=419, Expect=5e-140]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=436, Expect=6e-147]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=429, Expect=3e-144]} {Dmel: FBgn0011725, twin, [Score=451, Expect=9e-153]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=417, Expect=4e-139]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=412, Expect=2e-137]} {RNA1509_8779} {RNA1310_6379, RNA1509_8779} {RNA1509_8779, RNA815_3181} |
| 2. | MligTC455_34729 | 347 | 7.23 | Mlig455_005724 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.414 Region-enriched R4: 2.473/0.02557 |
ACAN | 0.965 | - | - | - | 0.965 | - | - | Mlig455_005724 {REF} {Length: 10316} {Human: ENSG00000157766, ACAN, aggrecan, [Score=63.2, Expect=1e-08]} {Celegans: WBGene00009362, F33E2.6, [Score=58.2, Expect=1e-07]} {RNA1509_1721, RNA1509_36679} {RNA1310_233.1, RNA1509_36679} {RNA1509_36679, RNA815_257} |
| 3. | MligTC455_34730 | 353 | 7.36 | Mlig455_059492 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.912 Region-enriched R4: 2.217/0.00297 |
SELPLG | 0.952 | - | - | - | 0.952 | - | - | Mlig455_059492 {REF} {Length: 10282} {Human: ENSG00000110876, SELPLG, selectin P ligand, [RH, Score=67.8, Expect=2e-10]} {Mouse: ENSMUSG00000030607, Acan, aggrecan, [Score=67.0, Expect=5e-10]} {Celegans: WBGene00009362, F33E2.6, [Score=69.7, Expect=3e-11]} {RNA1509_13152, RNA1509_14289, RNA1509_1721, RNA1509_44903, RNA1509_45720, RNA1509_58852} {RNA1310_233.1, RNA1509_13152, RNA1509_14289, RNA1509_44903, RNA1509_45720, RNA1509_58852} {RNA1509_13152, RNA1509_14289, RNA1509_44903, RNA1509_45720, RNA1509_58852, RNA815_257} |
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