Data search


search
Exact
Search

Results for MligTC455_23409

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23409 53 1.11 Mlig455_057148

Neo: Irradiation

Age: Up-Down-Down

DGKI Mlig455_057148 {REF} {Length: 2664} {Pfam: Diacylglycerol kinase accessory domain [PF00609.21, score=144.8]; Diacylglycerol kinase catalytic domain [PF00781.26, score=82.0]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=34.7]} {Human: ENSG00000157680, DGKI, diacylglycerol kinase iota, [Score=520, Expect=1e-172]; ENSG00000149091, DGKZ, diacylglycerol kinase zeta, [Score=501, Expect=5e-167]} {Mouse: ENSMUSG00000038665, Dgki, diacylglycerol kinase, iota, [Score=520, Expect=9e-175]; ENSMUSG00000040479, Dgkz, diacylglycerol kinase zeta, [Score=496, Expect=6e-165]} {Dmel: FBgn0261549, rdgA, retinal degeneration A, [Score=409, Expect=4e-131]} {Celegans: WBGene00019428, dgk-5, Putative diacylglycerol kinase K06A1.6, [Score=435, Expect=1e-141]} {Smed: dd_Smed_v6_12579_0_4, dd_Smed_v6_12579_0_4, [Score=478, Expect=2e-157]} {RNA1509_47663} {RNA1310_39269, RNA1509_47663} {RNA1509_47663, RNA815_25929}

Cumulative graph for MligTC455_23409

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.742 1.431 0.93687 1.00000
RegionR2 4.811 1.431 0.00386 0.05435
RegionR3 0.868 1.431 0.38875 0.91980
RegionR4 -0.965 1.431 0.95744 1.00000
RegionR5 -2.495 1.431 0.99193 1.00000
RegionR6 0.921 1.431 0.44226 1.00000
RegionR7 -1.564 1.431 0.99975 1.00000
RegionR8 -0.833 1.431 0.99982 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.98 1.431 0.94506 1.00000
RegenerationR2 2.19 1.431 0.05839 0.39740
RegenerationR3 3.184 1.431 0.02530 0.28624
RegenerationR4 2.402 1.431 0.04797 0.35290
RegenerationR5 3.105 1.431 0.03375 0.30578
RegenerationR6 4.41 1.431 0.00192 0.04982
RegenerationBL 0.76 1.431 0.99961 1.00000
RegenerationTP 5.58 1.431 0.03383 0.30673


Genes with expression patterns similar to MligTC455_23409

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23409 53 1.11 Mlig455_057148

Neo: Irradiation

Age: Up-Down-Down

DGKI 4 1.000 1.000 - - 1.000 1.000 Mlig455_057148 {REF} {Length: 2664} {Pfam: Diacylglycerol kinase accessory domain [PF00609.21, score=144.8]; Diacylglycerol kinase catalytic domain [PF00781.26, score=82.0]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=34.7]} {Human: ENSG00000157680, DGKI, diacylglycerol kinase iota, [Score=520, Expect=1e-172]; ENSG00000149091, DGKZ, diacylglycerol kinase zeta, [Score=501, Expect=5e-167]} {Mouse: ENSMUSG00000038665, Dgki, diacylglycerol kinase, iota, [Score=520, Expect=9e-175]; ENSMUSG00000040479, Dgkz, diacylglycerol kinase zeta, [Score=496, Expect=6e-165]} {Dmel: FBgn0261549, rdgA, retinal degeneration A, [Score=409, Expect=4e-131]} {Celegans: WBGene00019428, dgk-5, Putative diacylglycerol kinase K06A1.6, [Score=435, Expect=1e-141]} {Smed: dd_Smed_v6_12579_0_4, dd_Smed_v6_12579_0_4, [Score=478, Expect=2e-157]} {RNA1509_47663} {RNA1310_39269, RNA1509_47663} {RNA1509_47663, RNA815_25929}
2. MligTC455_34187 39 0.81 Mlig455_063626

Neo: Irradiation

Age: Up-Down-Down

2.506 0.774 0.771 - - 0.961 - Mlig455_063626 {REF} {Length: 3746} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=22.4]} {RNA1509_33402} {RNA1310_4029, RNA1509_33402} {RNA1509_33402, RNA815_8861}
3. MligTC455_06478 123 2.57 Mlig455_018821

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.603

2.423 0.741 0.731 - - - 0.951 Mlig455_018821 {REF} {Length: 1222} {RNA1509_40738, RNA1509_53046} {RNA1310_28380, RNA1509_53046} {RNA1509_53046, RNA815_37540}
4. MligTC455_06919 49 1.02 Mlig455_000585

Neo: Germline

Age: -

Region-enriched R4: 3.601/0.02056

1.794 - 0.843 - - - 0.951 Mlig455_000585 {REF} {Length: 1303} {RNA1509_54678} {RNA1310_47150} {RNA815_42356}
5. MligTC455_34996 19 0.39 Mlig455_057713

Neo: Germline

Age: -

1.771 - 0.820 - - - 0.951 Mlig455_057713 {REF} {Length: 828} {NoTransDecoderORF} {RNA1509_21772} {RNA1310_1377.1} {RNA815_9152.1}
6. MligTC455_06431 16 0.33 Mlig455_052844

Neo: -

Age: Down-Up-Down

1.685 - 0.717 - - - 0.968 Mlig455_052844 {REF} {Length: 2363} {RNA1509_48491} {RNA1310_28993} {RNA815_35050}
7. MligTC455_09121 22 0.46 Mlig455_032625

Neo: -

Age: -

1.68 - 0.707 - - - 0.973 Mlig455_032625 {REF} {Length: 775} {NoTransDecoderORF} {RNA1310_27045.1} {RNA815_53715}
8. MligTC455_29801 18 0.37 Mlig455_036199

Neo: Irradiation

Age: Up-Down-Down

SCNN1B 1.673 - 0.717 - - - 0.956 Mlig455_036199 {REF} {Length: 3178} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=184.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=65.5, Expect=2e-10]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=104, Expect=2e-23]} {RNA1509_47645} {RNA1310_11333.1} {RNA815_9471.1}
9. MligTC455_01955 7 0.14 Mlig455_061936

Neo: -

Age: -

0.975 - - - - - 0.975 Mlig455_061936 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_48892} {RNA815_31782}
10. MligTC455_11959 21 0.44 Mlig455_026336

Neo: -

Age: -

0.975 - - - - 0.975 - Mlig455_026336 {REF} {Length: 990} {NoTransDecoderORF} {RNA1509_56385} {RNA1310_67879} {RNA815_51996}
11. MligTC455_02342 6 0.13 Mlig455_067933

Neo: -

Age: -

0.973 - - - - - 0.973 Mlig455_067933 {REF} {Length: 463} {NoTransDecoderORF} {RNA1310_100060}
12. MligTC455_29857 48 1.01 Mlig455_063220

Neo: -

Age: -

0.973 - - - - - 0.973 Mlig455_063220 {REF} {Length: 1136} {TRANSSPLICED} {RNA1509_20954} {RNA1310_33964.1} {RNA815_10226}
13. MligTC455_28008 1580 32.91 Mlig455_005374

Neo: -

Age: Down-Down-Up

0.964 - - - - - 0.964 Mlig455_005374 {REF} {Length: 1804} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=20.1]} {RNA1509_22337} {RNA1310_8217} {RNA815_80.1}
14. MligTC455_31517 1266 26.38 Mlig455_005506

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=1.584

0.962 - - - - - 0.962 Mlig455_005506 {REF} {Length: 5380} {RNA1509_16377} {RNA1310_63485.1} {RNA815_34468.1}
15. MligTC455_27137 3053 63.6 Mlig455_005387

Neo: -

Age: Down-Down-Up

0.959 - - - - - 0.959 Mlig455_005387 {REF} {Length: 345} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1482, RNA1509_3} {RNA1310_851.2, RNA1509_1482} {RNA1509_1482, RNA815_80.1}
16. MligTC455_31593 7 0.14 Mlig455_010180

Neo: -

Age: -

0.959 - - - - - 0.959 Mlig455_010180 {REF} {Length: 824} {RNA1509_19049} {RNA1310_10356.1} {RNA815_21371.1}
17. MligTC455_46186 32 0.67 Mlig455_070704

Neo: -

Age: Down-Up-Down

0.958 - - - - - 0.958 Mlig455_070704 {REF} {Length: 840} {TRANSSPLICED} {RNA1509_21333} {RNA1310_96499} {RNA815_44302}
18. MligTC455_27138 2818 58.71 Mlig455_005410

Neo: -

Age: Down-Down-Down

0.957 - - - - - 0.957 Mlig455_005410 {REF} {Length: 160} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_12443, RNA1509_14192, RNA1509_63} {RNA1310_15760, RNA1509_14192, RNA1509_63} {RNA1509_14192, RNA1509_63, RNA815_80.1}
19. MligTC455_28029 15553 324.03 Mlig455_005383

Neo: -

Age: -

0.957 - - - - - 0.957 Mlig455_005383 {REF} {Length: 1496} {TRANSSPLICED} {RNA1509_1, RNA1509_14576} {RNA1310_851.1, RNA1509_1, RNA1509_14576} {RNA1509_1, RNA1509_14576, RNA815_80.1}
20. MligTC455_30412 16 0.33 Mlig455_069971

Neo: Irradiation

Age: Up-Down-Down

Regeneration-upregulated R6: 7.559

Regeneration-enriched R6: 7.559

0.957 - - - - - 0.957 Mlig455_069971 {REF} {Length: 2921} {RNA1509_48089} {RNA1310_11669.1} {RNA815_40639}
21. MligTC455_42424 10 0.21 Mlig455_041494

Neo: -

Age: -

DTHD1 0.953 - - - - 0.953 - Mlig455_041494 {REF} {Length: 3149} {Human: ENSG00000197057, DTHD1, death domain containing 1, [Score=78.2, Expect=4e-14]} {Mouse: ENSMUSG00000090326, Dthd1, death domain containing 1, [Score=73.6, Expect=7e-13]} {Smed: dd_Smed_v6_13807_0_1, dd_Smed_v6_13807_0_1, [Score=127, Expect=3e-30]} {RNA1310_84982}
22. MligTC455_53742 73 1.51 Mlig455_057335

Neo: -

Age: Up-Down-Down

0.953 - - - - 0.953 - Mlig455_057335 {REF} {Length: 4857} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=53.5, Expect=2e-06]} {RNA1310_20219} {RNA815_12949}
23. MligTC455_29788 91 1.9 Mlig455_020105, Mlig455_070460

Neo: -

Age: -

Regeneration-upregulated BL: 5.837

Regeneration-enriched BL: 5.837

0.95 - 0.950 - - - -

Mlig455_020105 {REF} {Length: 305} {NoTransDecoderORF} {RNA1509_9591} {RNA1310_52622} {RNA815_16629}

Mlig455_070460 {REF} {Length: 2457} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=54.6]} {Celegans: WBGene00007723, C25F9.2, [Score=142, Expect=3e-36]} {RNA1509_17816} {RNA1310_3417} {RNA815_694.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA