TomoSeq data search

Data search

Results for MligTC455_23439

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23439

1944

40.51

Mlig455_001956, Mlig455_002055, Mlig455_060889

Neo: Int S/G2/M

Age: -

Mlig455_001956 {REF} {Length: 2567} {TRANSSPLICED} {Dmel: FBgn0032101, CG9586, [Score=45.4, Expect=1e-05]} {RNA1509_24897, RNA1509_8565} {RNA1310_15129, RNA1509_24897} {RNA1509_24897, RNA815_17822}

Mlig455_002055 {REF} {Length: 2536} {TRANSSPLICED} {Dmel: FBgn0032101, CG9586, [Score=45.4, Expect=1e-05]} {RNA1509_52566, RNA1509_8565} {RNA1310_15129, RNA1509_52566} {RNA1509_52566, RNA815_17822}

Mlig455_060889 {REF} {Length: 2488} {TRANSSPLICED} {Dmel: FBgn0032101, CG9586, [Score=45.4, Expect=1e-05]} {RNA1509_8565} {RNA1310_15129, RNA1509_8565} {RNA1509_8565, RNA815_17822}

Cumulative graph for MligTC455_23439

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.292	5.565	0.67521	1.00000
RegionR2	0.203	5.565	0.63091	0.97183
RegionR3	0.263	5.565	0.44226	0.95757
RegionR4	0.204	5.565	0.61419	0.92504
RegionR5	0.255	5.565	0.43261	0.79242
RegionR6	0.036	5.565	0.92003	1.00000
RegionR7	0.145	5.565	0.70113	1.00000
RegionR8	-1.397	5.565	0.01022	0.19035

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.52	5.565	0.00552	0.36142
RegenerationR2	0.036	5.565	0.93147	1.00000
RegenerationR3	-0.288	5.565	0.51775	0.86539
RegenerationR4	-0.3	5.565	0.50096	0.87005
RegenerationR5	-0.018	5.565	0.96598	1.00000
RegenerationR6	0.173	5.565	0.69247	0.92021
RegenerationBL	0.515	5.565	0.24947	0.60563
RegenerationTP	1.258	5.565	0.01068	0.17542

Genes with expression patterns similar to MligTC455_23439

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23439	1944	40.51	Mlig455_001956, Mlig455_002055, Mlig455_060889	Neo: Int S/G2/M Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001956 {REF} {Length: 2567} {TRANSSPLICED} {Dmel: FBgn0032101, CG9586, [Score=45.4, Expect=1e-05]} {RNA1509_24897, RNA1509_8565} {RNA1310_15129, RNA1509_24897} {RNA1509_24897, RNA815_17822} Mlig455_002055 {REF} {Length: 2536} {TRANSSPLICED} {Dmel: FBgn0032101, CG9586, [Score=45.4, Expect=1e-05]} {RNA1509_52566, RNA1509_8565} {RNA1310_15129, RNA1509_52566} {RNA1509_52566, RNA815_17822} Mlig455_060889 {REF} {Length: 2488} {TRANSSPLICED} {Dmel: FBgn0032101, CG9586, [Score=45.4, Expect=1e-05]} {RNA1509_8565} {RNA1310_15129, RNA1509_8565} {RNA1509_8565, RNA815_17822}
2.	MligTC455_24981	443	9.22	Mlig455_034757	Neo: Int S/G2/M Age: -	TRAPPC1	1.861	-	-	-	0.952	-	0.909	Mlig455_034757 {REF} {Length: 1226} {TRANSSPLICED} {Pfam: Sybindin-like family [PF04099.14, score=79.5]} {Human: ENSG00000170043, TRAPPC1, trafficking protein particle complex 1, [Score=112, Expect=9e-32]} {Mouse: ENSMUSG00000049299, Trappc1, trafficking protein particle complex 1, [Score=113, Expect=3e-32]} {Dmel: FBgn0260860, Bet5, Blocked early in transport 5, [Score=92.0, Expect=6e-24]} {Celegans: WBGene00077643, trpp-1, TRansport Protein Particle, [Score=62.4, Expect=9e-13]} {Smed: dd_Smed_v6_9403_0_1, dd_Smed_v6_9403_0_1, [Score=82.0, Expect=4e-20]} {RNA1509_19822} {RNA1310_25160.1, RNA1509_19822} {RNA1509_19822, RNA815_14862}
3.	MligTC455_18439	230	4.79	Mlig455_006590	Neo: - Age: -	B3GNTL1	1.794	-	-	-	0.951	-	0.843	Mlig455_006590 {REF} {Length: 3108} {TRANSSPLICED} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=102.4]; Glycosyl transferase family 2 [PF00535.28, score=76.4]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=46.2]; Glycosyltransferase like family 2 [PF10111.11, score=41.3]; Glycosyltransferase like family 2 [PF13641.8, score=41.0]; FAD dependent oxidoreductase [PF01266.26, score=34.2]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=31.2]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=27.3]; FAD-NAD(P)-binding [PF13454.8, score=27.3]; Glycosyl transferase family 2 [PF13704.8, score=21.2]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=20.7]; Thi4 family [PF01946.19, score=19.2]} {Human: ENSG00000175711, B3GNTL1, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1, [Score=367, Expect=2e-123]; ENSG00000277033, B3GNTL1, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1, [Score=367, Expect=2e-123]} {Mouse: ENSMUSG00000046605, B3gntl1, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1, [Score=361, Expect=5e-121]} {Dmel: FBgn0033079, Fmo-2, Flavin-containing monooxygenase 2, [Score=124, Expect=2e-30]} {Celegans: WBGene00008766, F13G3.6, [RH, Score=299, Expect=3e-97]} {Smed: dd_Smed_v6_9449_0_1, dd_Smed_v6_9449_0_1, [Score=125, Expect=5e-31]} {RNA1509_20392} {RNA1310_10017} {RNA815_9191}
4.	MligTC455_46190	589	12.28	Mlig455_039853	Neo: - Age: - Region-enriched R4: 2.050/0.00772 Region-enriched R5: 1.723/0.00979	TMEM242	1.792	-	-	-	0.834	-	0.958	Mlig455_039853 {REF} {Length: 1101} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1358) [PF07096.13, score=51.2]} {Human: ENSG00000215712, TMEM242, transmembrane protein 242, [RH, Score=48.5, Expect=2e-07]} {Mouse: ENSMUSG00000004945, Tmem242, transmembrane protein 242, [RH, Score=49.3, Expect=7e-08]} {Dmel: FBgn0030311, CG11699, [Score=44.7, Expect=3e-06]} {Smed: dd_Smed_v6_10709_0_1, dd_Smed_v6_10709_0_1, [RH, Score=51.6, Expect=4e-09]} {RNA1509_50512} {RNA1310_62040, RNA1509_50512} {RNA1509_50512, RNA815_53729}
5.	MligTC455_25024	713	14.85	Mlig455_043194	Neo: - Age: Up-Down-Up	TSC2	1.711	-	-	-	-	0.756	0.955	Mlig455_043194 {REF} {Length: 5800} {Pfam: Domain of unknown function (DUF3384) [PF11864.10, score=59.5]; Rap/ran-GAP [PF02145.17, score=46.1]; Tuberin [PF03542.18, score=38.1]} {Human: ENSG00000103197, TSC2, TSC complex subunit 2, [Score=95.1, Expect=6e-19]} {Mouse: ENSMUSG00000002496, Tsc2, tuberous sclerosis 2, [Score=87.8, Expect=8e-17]} {Dmel: FBgn0005198, gig, gigas, [RH, Score=90.5, Expect=9e-18]} {Celegans: WBGene00018734, F53A10.2, Rap1GAP, [Score=59.7, Expect=1e-08]} {RNA1509_55366} {RNA1310_1230.2} {RNA815_7005}
6.	MligTC455_41848	275	5.74	Mlig455_003069	Neo: Int S/G2/M Age: -	KDM1A	1.694	-	-	-	0.963	-	0.731	Mlig455_003069 {REF} {Length: 4146} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=356.8]; SWIRM domain [PF04433.19, score=52.4]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=40.2]; FAD dependent oxidoreductase [PF01266.26, score=26.8]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=24.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=23.9]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=23.1]; FAD binding domain [PF00890.26, score=21.7]; HI0933-like protein [PF03486.16, score=20.9]; FAD binding domain [PF01494.21, score=18.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [RH, Score=682, Expect=0.0]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [RH, Score=684, Expect=0.0]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [RH, Score=582, Expect=0.0]} {Celegans: WBGene00005010, spr-5, Probable lysine-specific histone demethylase 1, [RH, Score=191, Expect=3e-51]} {Smed: dd_Smed_v6_7431_0_4, dd_Smed_v6_7431_0_4, [RH, Score=310, Expect=4e-93]} {RNA1509_16203} {RNA1310_5633} {RNA815_14558}
7.	MligTC455_38343	1290	26.87	Mlig455_021940	Neo: Int S/G2/M Age: logFC(26M/2M)=0.400 Region-enriched R5: 1.042/0.00235	MRPS18B	0.958	-	-	-	-	-	0.958	Mlig455_021940 {REF} {Length: 1817} {TRANSSPLICED} {Human: ENSG00000203624, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000204568, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000229861, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000223775, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000233813, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000226111, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000227420, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]} {Mouse: ENSMUSG00000024436, Mrps18b, mitochondrial ribosomal protein S18B, [RH, Score=88.2, Expect=3e-20]} {Dmel: FBgn0032849, mRpS18B, mitochondrial ribosomal protein S18B, [RH, Score=138, Expect=5e-40]} {Celegans: WBGene00011759, mrps-18B, Mitochondrial Ribosomal Protein, Small, [RH, Score=84.0, Expect=4e-19]} {Smed: dd_Smed_v6_3535_0_1, dd_Smed_v6_3535_0_1, [RH, Score=131, Expect=7e-37]} {RNA1509_17779, RNA1509_41779} {RNA1310_13167, RNA1509_17779, RNA1509_41779} {RNA1509_17779, RNA1509_41779, RNA815_325}
8.	MligTC455_33027	2664	55.51	Mlig455_023599, Mlig455_068105	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_023599 {REF} {Length: 4481} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7165} {RNA1310_2639.1} {RNA815_1955} Mlig455_068105 {REF} {Length: 4959} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27370, RNA1509_48007, RNA1509_58775, RNA1509_7165} {RNA1310_2639.1, RNA1509_27370, RNA1509_48007, RNA1509_58775, RNA1509_7165} {RNA1509_27370, RNA1509_48007, RNA1509_58775, RNA1509_7165, RNA815_1955}

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