Data search
Results for MligTC455_23483
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23483 | 98 | 2.04 | Mlig455_018288 | Neo: - Age: - |
Mlig455_018288 {REF} {Length: 2636} {TRANSSPLICED} {RNA1509_25161} {RNA1310_13086.4} {RNA815_8320} |
Cumulative graph for MligTC455_23483
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.409 | 1.96 | 0.15157 | 0.76702 | |
| RegionR2 | 1.366 | 1.96 | 0.28659 | 0.67437 | |
| RegionR3 | 1.207 | 1.96 | 0.22250 | 0.76442 | |
| RegionR4 | -0.751 | 1.96 | 0.97787 | 1.00000 | |
| RegionR5 | 1.669 | 1.96 | 0.03856 | 0.15538 | |
| RegionR6 | 0.6 | 1.96 | 0.58967 | 1.00000 | |
| RegionR7 | 1.764 | 1.96 | 0.11095 | 0.63204 | |
| RegionR8 | 0.554 | 1.96 | 0.68549 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.757 | 1.96 | 0.99984 | 1.00000 | |
| RegenerationR2 | 1.62 | 1.96 | 0.01764 | 0.21812 | |
| RegenerationR3 | 0.139 | 1.96 | 0.87567 | 1.00000 | |
| RegenerationR4 | 2.004 | 1.96 | 0.01995 | 0.22272 | |
| RegenerationR5 | 0.941 | 1.96 | 0.12347 | 0.52575 | |
| RegenerationR6 | 1.582 | 1.96 | 0.07810 | 0.34921 | |
| RegenerationBL | 0.537 | 1.96 | 0.65432 | 0.99028 | |
| RegenerationTP | -1.9 | 1.96 | 0.27569 | 0.72339 |
Genes with expression patterns similar to MligTC455_23483
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23483 | 98 | 2.04 | Mlig455_018288 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018288 {REF} {Length: 2636} {TRANSSPLICED} {RNA1509_25161} {RNA1310_13086.4} {RNA815_8320} | |
| 2. | MligTC455_28761 | 361 | 7.53 | Mlig455_038401, Mlig455_038605 | Neo: Irradiation Age: - |
RRP12 | 1.707 | - | - | - | 0.746 | 0.961 | - | Mlig455_038401 {REF} {Length: 5091} {TRANSSPLICED} {Pfam: NUC173 domain [PF08161.14, score=127.7]} {Human: ENSG00000052749, RRP12, ribosomal RNA processing 12 homolog, [RH, Score=345, Expect=4e-98]} {Mouse: ENSMUSG00000035049, Rrp12, ribosomal RNA processing 12 homolog (S. cerevisiae), [RH, Score=356, Expect=4e-102]} {Dmel: FBgn0030504, CG2691, [RH, Score=238, Expect=2e-63]} {Celegans: WBGene00021595, Y46E12BL.2, [RH, Score=181, Expect=6e-46]} {RNA1509_40887, RNA1509_43476, RNA1509_47958, RNA1509_49995, RNA1509_5642} {RNA1310_1820, RNA1509_40887, RNA1509_43476, RNA1509_47958, RNA1509_49995, RNA1509_5642} {RNA1509_40887, RNA1509_43476, RNA1509_47958, RNA1509_49995, RNA1509_5642, RNA815_294.1} Mlig455_038605 {REF} {Length: 5210} {TRANSSPLICED} {Pfam: NUC173 domain [PF08161.14, score=126.9]} {Human: ENSG00000052749, RRP12, ribosomal RNA processing 12 homolog, [RH, Score=343, Expect=1e-97]} {Mouse: ENSMUSG00000035049, Rrp12, ribosomal RNA processing 12 homolog (S. cerevisiae), [RH, Score=354, Expect=2e-101]} {Dmel: FBgn0030504, CG2691, [RH, Score=239, Expect=9e-64]} {Celegans: WBGene00021595, Y46E12BL.2, [RH, Score=184, Expect=6e-47]} {RNA1509_5642} {RNA1310_1820} {RNA815_294.1} |
| 3. | MligTC455_37636 | 52 | 1.08 | Mlig455_056163, Mlig455_058738 | Neo: - |
0.972 | - | - | - | - | 0.972 | - | Mlig455_056163 {REF} {Length: 233} {NoTransDecoderORF} {RNA1310_37769} {RNA815_52459} Mlig455_058738 {REF} {Length: 2113} {NoTransDecoderORF} {RNA1509_34079} {RNA1310_61747} {RNA815_21592.1} |
|
| 4. | MligTC455_30739 | 246 | 5.13 | Mlig455_056815 | Neo: - Age: Up-Down-Down |
SLC9A9 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_056815 {REF} {Length: 2629} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=37.5]} {Human: ENSG00000181804, SLC9A9, solute carrier family 9 member A9, [Score=95.9, Expect=2e-23]} {Mouse: ENSMUSG00000031129, Slc9a9, solute carrier family 9 (sodium/hydrogen exchanger), member 9, [Score=95.5, Expect=2e-23]} {Dmel: FBgn0028703, Nhe3, Na[+]/H[+] hydrogen exchanger 3, [Score=92.0, Expect=3e-22]} {Celegans: WBGene00003733, nhx-5, Sodium/hydrogen exchanger, [Score=77.0, Expect=3e-17]} {Smed: dd_Smed_v6_5461_0_1, dd_Smed_v6_5461_0_1, [Score=100, Expect=2e-25]} {RNA1509_50997} {RNA1310_6937.1} {RNA815_21083} |
| 5. | MligTC455_42918 | 220 | 4.59 | Mlig455_035176 | Neo: - Age: - |
KCNK9 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_035176 {REF} {Length: 1722} {Pfam: Ion channel [PF07885.18, score=90.6]; Ion transport protein [PF00520.33, score=21.3]} {Human: ENSG00000169427, KCNK9, potassium two pore domain channel subfamily K member 9, [Score=82.0, Expect=4e-17]} {Mouse: ENSMUSG00000036760, Kcnk9, potassium channel, subfamily K, member 9, [Score=84.0, Expect=6e-18]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=98.6, Expect=4e-23]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=84.7, Expect=1e-18]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [RH, Score=94.0, Expect=2e-22]} {RNA1509_37947} {RNA1310_32556} {RNA815_14264} |
| 6. | MligTC455_39128 | 177 | 3.69 | Mlig455_039333 | Neo: - Age: logFC(26M/2M)=0.519 |
ZNF622 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_039333 {REF} {Length: 1640} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=101.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=33.1]; Zinc-finger of C2H2 type [PF12874.9, score=30.1]} {Human: ENSG00000173545, ZNF622, zinc finger protein 622, [RH, Score=183, Expect=1e-53]} {Mouse: ENSMUSG00000052253, Zfp622, zinc finger protein 622, [RH, Score=181, Expect=5e-53]} {Dmel: FBgn0030878, CG6769, [Score=167, Expect=2e-48]} {Celegans: WBGene00015809, C16A3.4, [Score=150, Expect=1e-42]} {Smed: dd_Smed_v6_1345_0_1, dd_Smed_v6_1345_0_1, [Score=102, Expect=8e-25]} {RNA1509_9112} {RNA1310_8103.2} {RNA815_3404} |
| 7. | MligTC455_46097 | 66 | 1.38 | Mlig455_066528 | Neo: - Age: logFC(26M/2M)=0.553 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_066528 {REF} {Length: 1956} {TRANSSPLICED} {Pfam: MORN repeat [PF02493.22, score=28.4]} {RNA1509_5700} {RNA1310_28408} {RNA815_19918} | |
| 8. | MligTC455_22415 | 512 | 10.67 | Mlig455_008652, Mlig455_069418 | Neo: - Age: - |
RAB1A, RAB1B | 0.952 | - | - | - | - | 0.952 | - | Mlig455_008652 {REF} {Length: 6906} {Pfam: Ras family [PF00071.24, score=587.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=389.6]; ADP-ribosylation factor family [PF00025.23, score=200.9]; 50S ribosome-binding GTPase [PF01926.25, score=108.0]; RsgA GTPase [PF03193.18, score=66.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=63.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=52.7]; AAA domain [PF13401.8, score=51.9]; AAA ATPase domain [PF13191.8, score=51.0]; Bacterial TniB protein [PF05621.13, score=45.5]; NACHT domain [PF05729.14, score=44.6]; P-loop containing dynein motor region [PF12775.9, score=42.5]; P-loop containing region of AAA domain [PF13555.8, score=42.0]; MCM P-loop domain [PF00493.25, score=41.8]; ABC transporter [PF00005.29, score=40.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=39.2]; Caspase recruitment domain [PF00619.23, score=36.1]; AAA domain [PF13671.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=32.7]; Protein of unknown function (DUF815) [PF05673.15, score=30.6]; Septin [PF00735.20, score=30.3]; AAA domain [PF13479.8, score=30.1]; G-protein alpha subunit [PF00503.22, score=29.2]; RNA helicase [PF00910.24, score=28.1]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.1]; Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=21.9]; AAA domain [PF13173.8, score=20.0]; Interferon-inducible GTPase (IIGP) [PF05049.15, score=19.8]; AAA domain [PF13238.8, score=19.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=18.6]; Family of unknown function (DUF5838) [PF19156.2, score=18.5]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=161, Expect=2e-44]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=160, Expect=4e-44]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=155, Expect=4e-42]; ENSG00000285641, AL358472.6, novel protein, [Score=155, Expect=4e-42]; ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=153, Expect=1e-41]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=162, Expect=6e-45]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=160, Expect=3e-44]} {Dmel: FBgn0285937, Rab1, [Score=163, Expect=3e-45]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=160, Expect=2e-44]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=160, Expect=1e-44]} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1310_2946, RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043, RNA815_567} Mlig455_069418 {REF} {Length: 6098} {Pfam: Ras family [PF00071.24, score=148.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.4]; ADP-ribosylation factor family [PF00025.23, score=63.8]; Caspase recruitment domain [PF00619.23, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.2]; Bacterial TniB protein [PF05621.13, score=18.7]} {Human: ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=155, Expect=2e-42]; ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=155, Expect=1e-42]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=156, Expect=6e-43]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=154, Expect=2e-42]} {Dmel: FBgn0285937, Rab1, [Score=154, Expect=2e-42]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=148, Expect=1e-40]} {RNA1509_44043} {RNA1310_6196} {RNA815_567} |
| 9. | MligTC455_06453 | 157 | 3.27 | Mlig455_025541, Mlig455_025558 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_025541 {REF} {Length: 1381} {RNA1310_109111} Mlig455_025558 {REF} {Length: 1263} {RNA1310_109111} |
|
| 10. | MligTC455_47361 | 1348 | 28.08 | Mlig455_010891, Mlig455_033205 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.649 |
ECI1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_010891 {REF} {Length: 1222} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=106.3]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=29.3]} {Human: ENSG00000167969, ECI1, enoyl-CoA delta isomerase 1, [Score=108, Expect=2e-27]} {Mouse: ENSMUSG00000024132, Eci1, enoyl-Coenzyme A delta isomerase 1, [Score=111, Expect=2e-28]} {Dmel: FBgn0032160, CG4598, [Score=107, Expect=4e-27]} {Celegans: WBGene00001154, ech-5, Enoyl-CoA Hydratase, [Score=67.0, Expect=1e-12]} {Smed: dd_Smed_v6_3553_0_1, dd_Smed_v6_3553_0_1, [Score=74.3, Expect=3e-15]} {RNA1509_13854} {RNA1310_28320.1, RNA1509_13854} {RNA1509_13854, RNA815_17367} Mlig455_033205 {REF} {Length: 2143} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=81.1]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=19.9]} {Human: ENSG00000167969, ECI1, enoyl-CoA delta isomerase 1, [Score=67.4, Expect=6e-12]} {Mouse: ENSMUSG00000024132, Eci1, enoyl-Coenzyme A delta isomerase 1, [Score=67.0, Expect=6e-12]} {Dmel: FBgn0032161, CG4594, [Score=68.2, Expect=3e-12]} {RNA1509_13854} {RNA1310_19425.1} {RNA815_17367} |
| 11. | MligTC455_52237 | 15 | 0.32 | Mlig455_013491 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_013491 {REF} {Length: 1488} {NoTransDecoderORF} {RNA1509_50956} {RNA1310_27383} {RNA815_9852.1} |