TomoSeq data search

Data search

Results for MligTC455_23495

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23495	906	18.88	Mlig455_056528	Neo: - Age: Down-Down-Up Region-enriched R4: 2.923/0.00016	TSPAN3	Mlig455_056528 {REF} {Length: 2458} {Pfam: Tetraspanin family [PF00335.22, score=142.2]} {Human: ENSG00000140391, TSPAN3, tetraspanin 3, [RH, Score=140, Expect=4e-40]} {Mouse: ENSMUSG00000032324, Tspan3, tetraspanin 3, [RH, Score=138, Expect=1e-39]} {Dmel: FBgn0032075, Tsp29Fb, Tetraspanin 29Fb, [RH, Score=100, Expect=9e-25]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [RH, Score=89.4, Expect=2e-21]} {Smed: dd_Smed_v6_2452_0_1, dd_Smed_v6_2452_0_1, [RH, Score=143, Expect=8e-42]} {RNA1509_15809, RNA1509_17275, RNA1509_48156} {RNA1310_37781, RNA1509_15809, RNA1509_17275, RNA1509_48156} {RNA1509_15809, RNA1509_17275, RNA1509_48156, RNA815_16679}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_23495

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.657	4.588	0.06184	0.56793
RegionR2	0.042	4.588	0.83251	1.00000
RegionR3	1.369	4.588	0.03783	0.33814
RegionR4	2.923	4.588	0.00001	0.00016
RegionR5	1.369	4.588	0.04127	0.16315
RegionR6	1.006	4.588	0.19266	0.76037
RegionR7	0.013	4.588	0.84695	1.00000
RegionR8	-0.064	4.588	0.87422	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.176	4.588	0.33037	1.00000
RegenerationR2	0.934	4.588	0.01971	0.23028
RegenerationR3	0.568	4.588	0.19955	0.63419
RegenerationR4	0.599	4.588	0.19684	0.64212
RegenerationR5	1.292	4.588	0.00238	0.08498
RegenerationR6	0.349	4.588	0.45564	0.77464
RegenerationBL	0.873	4.588	0.10549	0.38330
RegenerationTP	1.661	4.588	0.00597	0.12985

Genes with expression patterns similar to MligTC455_23495

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23495	906	18.88	Mlig455_056528	Neo: - Age: Down-Down-Up Region-enriched R4: 2.923/0.00016	TSPAN3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056528 {REF} {Length: 2458} {Pfam: Tetraspanin family [PF00335.22, score=142.2]} {Human: ENSG00000140391, TSPAN3, tetraspanin 3, [RH, Score=140, Expect=4e-40]} {Mouse: ENSMUSG00000032324, Tspan3, tetraspanin 3, [RH, Score=138, Expect=1e-39]} {Dmel: FBgn0032075, Tsp29Fb, Tetraspanin 29Fb, [RH, Score=100, Expect=9e-25]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [RH, Score=89.4, Expect=2e-21]} {Smed: dd_Smed_v6_2452_0_1, dd_Smed_v6_2452_0_1, [RH, Score=143, Expect=8e-42]} {RNA1509_15809, RNA1509_17275, RNA1509_48156} {RNA1310_37781, RNA1509_15809, RNA1509_17275, RNA1509_48156} {RNA1509_15809, RNA1509_17275, RNA1509_48156, RNA815_16679}
2.	MligTC455_49902	596	12.42	Mlig455_029392, Mlig455_029428	Neo: - Age: -	ARF5	0.955	-	-	-	-	-	0.955	Mlig455_029392 {REF} {Length: 2843} {Pfam: ADP-ribosylation factor family [PF00025.23, score=190.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=46.7]; Ras family [PF00071.24, score=45.1]; Signal recognition particle receptor beta subunit [PF09439.12, score=38.4]; G-protein alpha subunit [PF00503.22, score=35.7]; 50S ribosome-binding GTPase [PF01926.25, score=20.7]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=8e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=187, Expect=4e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=184, Expect=7e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=2e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=6e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=187, Expect=2e-60]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=184, Expect=4e-59]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=184, Expect=5e-59]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=185, Expect=1e-59]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=187, Expect=2e-60]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=191, Expect=5e-62]} {RNA1509_27886} {RNA1310_32816} {RNA815_17570} Mlig455_029428 {REF} {Length: 1977} {Pfam: ADP-ribosylation factor family [PF00025.23, score=187.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=44.6]; Ras family [PF00071.24, score=42.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=35.7]; G-protein alpha subunit [PF00503.22, score=32.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=7e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=188, Expect=2e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=185, Expect=4e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=1e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=4e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=188, Expect=1e-60]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=185, Expect=3e-59]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=185, Expect=2e-59]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=186, Expect=4e-60]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=188, Expect=8e-61]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=189, Expect=3e-61]} {RNA1509_27886} {RNA1310_32816, RNA1509_27886} {RNA1509_27886, RNA815_17570}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23495

906

18.88

Mlig455_056528

Neo: -

Age: Down-Down-Up

Region-enriched R4: 2.923/0.00016

TSPAN3

1.000

MligTC455_49902

596

12.42

Mlig455_029392, Mlig455_029428

Neo: -

Age: -

ARF5

0.955

Mlig455_029392 {REF} {Length: 2843} {Pfam: ADP-ribosylation factor family [PF00025.23, score=190.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=46.7]; Ras family [PF00071.24, score=45.1]; Signal recognition particle receptor beta subunit [PF09439.12, score=38.4]; G-protein alpha subunit [PF00503.22, score=35.7]; 50S ribosome-binding GTPase [PF01926.25, score=20.7]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=8e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=187, Expect=4e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=184, Expect=7e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=2e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=6e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=187, Expect=2e-60]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=184, Expect=4e-59]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=184, Expect=5e-59]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=185, Expect=1e-59]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=187, Expect=2e-60]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=191, Expect=5e-62]} {RNA1509_27886} {RNA1310_32816} {RNA815_17570}

Mlig455_029428 {REF} {Length: 1977} {Pfam: ADP-ribosylation factor family [PF00025.23, score=187.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=44.6]; Ras family [PF00071.24, score=42.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=35.7]; G-protein alpha subunit [PF00503.22, score=32.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=7e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=188, Expect=2e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=185, Expect=4e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=1e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=4e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=188, Expect=1e-60]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=185, Expect=3e-59]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=185, Expect=2e-59]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=186, Expect=4e-60]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=188, Expect=8e-61]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=189, Expect=3e-61]} {RNA1509_27886} {RNA1310_32816, RNA1509_27886} {RNA1509_27886, RNA815_17570}