TomoSeq data search

Data search

Results for MligTC455_23614

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23614

25

0.52

Mlig455_001038, Mlig455_019972

Neo: -

Age: -

ATOH1, OVCH1

Mlig455_001038 {REF} {Length: 1996} {Pfam: Trypsin [PF00089.28, score=201.1]; Trypsin-like peptidase domain [PF13365.8, score=32.2]} {Human: ENSG00000187950, OVCH1, ovochymase 1, [Score=177, Expect=2e-49]; ENSG00000153802, TMPRSS11D, transmembrane serine protease 11D, [Score=175, Expect=2e-51]} {Mouse: ENSMUSG00000059406, Tmprss9, transmembrane protease, serine 9, [Score=167, Expect=5e-46]; ENSMUSG00000109764, Klkb1, kallikrein B, plasma 1, [Score=166, Expect=2e-46]; ENSMUSG00000016942, Tmprss6, transmembrane serine protease 6, [Score=162, Expect=1e-44]; ENSMUSG00000024124, Prss30, protease, serine 30, [Score=162, Expect=2e-47]} {Dmel: FBgn0031619, CG3355, [Score=137, Expect=4e-38]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [Score=154, Expect=9e-45]} {Smed: dd_Smed_v6_1427_0_1, dd_Smed_v6_1427_0_1, [Score=150, Expect=9e-43]} {RNA1310_59361} {RNA815_36264.1}

Mlig455_019972 {REF} {Length: 527} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=55.7]} {Human: ENSG00000172238, ATOH1, atonal bHLH transcription factor 1, [Score=67.4, Expect=4e-13]} {Mouse: ENSMUSG00000073043, Atoh1, atonal bHLH transcription factor 1, [Score=67.4, Expect=2e-13]} {Dmel: FBgn0003270, amos, absent MD neurons and olfactory sensilla, [RH, Score=72.0, Expect=8e-16]} {Celegans: WBGene00003018, lin-32, [RH, Score=71.2, Expect=3e-16]} {Smed: dd_Smed_v6_26877_0_1, dd_Smed_v6_26877_0_1, [RH, Score=68.2, Expect=1e-15]}

Cumulative graph for MligTC455_23614

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.993	0.762	0.99979	1.00000
RegionR2	0.347	0.762	0.55045	0.91582
RegionR3	-1.951	0.762	0.99979	1.00000
RegionR4	1.245	0.762	0.24359	0.54151
RegionR5	-1.864	0.762	0.99968	1.00000
RegionR6	-2.546	0.762	0.99971	1.00000
RegionR7	3.158	0.762	0.06197	0.47806
RegionR8	-0.382	0.762	0.99974	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.934	0.762	0.99989	1.00000
RegenerationR2	-0.819	0.762	0.42635	0.83205
RegenerationR3	0.42	0.762	0.58893	0.90326
RegenerationR4	-0.217	0.762	0.82855	0.99719
RegenerationR5	1.04	0.762	0.34803	0.76275
RegenerationR6	1.213	0.762	0.46935	0.78401
RegenerationBL	-1.282	0.762	0.86893	1.00000
RegenerationTP	0.505	0.762	0.81072	1.00000

Genes with expression patterns similar to MligTC455_23614

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23614	25	0.52	Mlig455_001038, Mlig455_019972	Neo: - Age: -	ATOH1, OVCH1	1	-	-	-	-	1.000	-	Mlig455_001038 {REF} {Length: 1996} {Pfam: Trypsin [PF00089.28, score=201.1]; Trypsin-like peptidase domain [PF13365.8, score=32.2]} {Human: ENSG00000187950, OVCH1, ovochymase 1, [Score=177, Expect=2e-49]; ENSG00000153802, TMPRSS11D, transmembrane serine protease 11D, [Score=175, Expect=2e-51]} {Mouse: ENSMUSG00000059406, Tmprss9, transmembrane protease, serine 9, [Score=167, Expect=5e-46]; ENSMUSG00000109764, Klkb1, kallikrein B, plasma 1, [Score=166, Expect=2e-46]; ENSMUSG00000016942, Tmprss6, transmembrane serine protease 6, [Score=162, Expect=1e-44]; ENSMUSG00000024124, Prss30, protease, serine 30, [Score=162, Expect=2e-47]} {Dmel: FBgn0031619, CG3355, [Score=137, Expect=4e-38]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [Score=154, Expect=9e-45]} {Smed: dd_Smed_v6_1427_0_1, dd_Smed_v6_1427_0_1, [Score=150, Expect=9e-43]} {RNA1310_59361} {RNA815_36264.1} Mlig455_019972 {REF} {Length: 527} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=55.7]} {Human: ENSG00000172238, ATOH1, atonal bHLH transcription factor 1, [Score=67.4, Expect=4e-13]} {Mouse: ENSMUSG00000073043, Atoh1, atonal bHLH transcription factor 1, [Score=67.4, Expect=2e-13]} {Dmel: FBgn0003270, amos, absent MD neurons and olfactory sensilla, [RH, Score=72.0, Expect=8e-16]} {Celegans: WBGene00003018, lin-32, [RH, Score=71.2, Expect=3e-16]} {Smed: dd_Smed_v6_26877_0_1, dd_Smed_v6_26877_0_1, [RH, Score=68.2, Expect=1e-15]}
2.	MligTC455_13494	8	0.17	Mlig455_020129	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_020129 {REF} {Length: 307} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_129356}
3.	MligTC455_14121	75	1.57	Mlig455_018866	Neo: - Age: Down-Up-Down	FAM192A	0.968	-	-	-	-	0.968	-	Mlig455_018866 {REF} {Length: 1337} {TRANSSPLICED} {Pfam: FAM192A/Fyv6, N-terminal domain [PF10187.11, score=70.4]} {Human: ENSG00000172775, FAM192A, family with sequence similarity 192 member A, [RH, Score=70.1, Expect=3e-15]} {Mouse: ENSMUSG00000031774, Fam192a, family with sequence similarity 192, member A, [RH, Score=72.4, Expect=3e-16]} {Dmel: FBgn0034242, CG14480, [RH, Score=70.9, Expect=1e-14]} {Celegans: WBGene00007705, C25A1.1, [RH, Score=50.8, Expect=9e-08]} {Smed: dd_Smed_v6_11323_0_1, dd_Smed_v6_11323_0_1, [RH, Score=47.4, Expect=1e-06]} {RNA1509_24417} {RNA1310_42235} {RNA815_23410}
4.	MligTC455_44325	26	0.53	Mlig455_030998	Neo: Irradiation Age: -	SYNCRIP	0.966	-	-	-	-	0.966	-	Mlig455_030998 {REF} {Length: 4803} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=126.3]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=246, Expect=3e-72]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=246, Expect=3e-72]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=243, Expect=2e-72]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=239, Expect=5e-70]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=171, Expect=2e-45]} {RNA1509_16867, RNA1509_45274} {RNA1310_16158, RNA1509_45274} {RNA1509_45274, RNA815_17530}
5.	MligTC455_32590	27	0.56	Mlig455_055612	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_055612 {REF} {Length: 2482} {NoTransDecoderORF} {RNA1509_48406} {RNA1310_63820} {RNA815_59995}
6.	MligTC455_06846	21	0.43	Mlig455_021755	Neo: - Age: -	MAST4	0.96	-	-	-	-	0.960	-	Mlig455_021755 {REF} {Length: 3561} {Pfam: Domain of unknown function (DUF1908) [PF08926.13, score=232.0]; Protein kinase domain [PF00069.27, score=186.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.6]; ABC1 atypical kinase-like domain [PF03109.18, score=25.2]; Kinase-like [PF14531.8, score=18.8]} {Human: ENSG00000069020, MAST4, microtubule associated serine/threonine kinase family member 4, [Score=549, Expect=5e-170]; ENSG00000086015, MAST2, microtubule associated serine/threonine kinase 2, [Score=545, Expect=8e-172]; ENSG00000105613, MAST1, microtubule associated serine/threonine kinase 1, [Score=523, Expect=3e-165]} {Mouse: ENSMUSG00000034751, Mast4, microtubule associated serine/threonine kinase family member 4, [Score=548, Expect=6e-170]; ENSMUSG00000003810, Mast2, microtubule associated serine/threonine kinase 2, [Score=548, Expect=4e-173]} {Dmel: FBgn0267390, dop, drop out, [Score=391, Expect=4e-116]} {Celegans: WBGene00002192, kin-4, KIN-4 protein; Protein KINase, [Score=470, Expect=5e-146]} {Smed: dd_Smed_v6_2028_0_1, dd_Smed_v6_2028_0_1, [Score=537, Expect=3e-176]} {RNA1509_23083} {RNA1310_726.1} {RNA815_4601}
7.	MligTC455_07196	45	0.94	Mlig455_026349	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_026349 {REF} {Length: 350} {NoTransDecoderORF} {RNA1310_37227.1} {RNA815_56935}
8.	MligTC455_17751	64	1.34	Mlig455_071033	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_071033 {REF} {Length: 997} {NoTransDecoderORF} {RNA1509_31754} {RNA1310_99642}
9.	MligTC455_08311	59	1.23	Mlig455_027019	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_027019 {REF} {Length: 696} {NoTransDecoderORF} {RNA1509_42937} {RNA1310_5574.1} {RNA815_27436}
10.	MligTC455_19498	14	0.29	Mlig455_000991	Neo: - Age: -	SPTBN1	0.956	-	-	-	-	0.956	-	Mlig455_000991 {REF} {Length: 3544} {Pfam: Spectrin repeat [PF00435.23, score=110.9]; Biogenesis of lysosome-related organelles complex-1 subunit 2 [PF10046.11, score=19.9]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=154, Expect=2e-40]} {Mouse: ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=156, Expect=3e-41]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [Score=183, Expect=1e-50]} {Celegans: WBGene00006803, unc-70, Spectrin beta chain, [Score=164, Expect=5e-44]} {Smed: dd_Smed_v6_1684_0_1, dd_Smed_v6_1684_0_1, [Score=204, Expect=6e-58]} {RNA1509_56744} {RNA1310_381} {RNA815_320}
11.	MligTC455_19499	13	0.28	Mlig455_057206	Neo: - Age: Up-Down-Down	SPTBN1	0.956	-	-	-	-	0.956	-	Mlig455_057206 {REF} {Length: 3413} {Pfam: Spectrin repeat [PF00435.23, score=416.8]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=797, Expect=0.0]} {Mouse: ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=798, Expect=0.0]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [Score=833, Expect=0.0]} {Celegans: WBGene00006803, unc-70, Spectrin beta chain, [Score=822, Expect=0.0]} {Smed: dd_Smed_v6_7344_0_1, dd_Smed_v6_7344_0_1, [Score=956, Expect=0.0]} {RNA1509_12295} {RNA1310_381} {RNA815_320}
12.	MligTC455_18280	44	0.91	Mlig455_020514	Neo: Int S/G2/M Age: Down-Down-Up	RRS1	0.955	-	-	-	-	0.955	-	Mlig455_020514 {REF} {Length: 1293} {TRANSSPLICED} {Pfam: Ribosome biogenesis regulatory protein (RRS1) [PF04939.14, score=182.2]} {Human: ENSG00000179041, RRS1, ribosome biogenesis regulator homolog, [RH, Score=229, Expect=3e-72]} {Mouse: ENSMUSG00000061024, Rrs1, ribosome biogenesis regulator 1, [RH, Score=229, Expect=5e-72]} {Dmel: FBgn0052409, CG32409, [RH, Score=163, Expect=4e-47]} {Celegans: WBGene00007617, rrbs-1, Ribosome biogenesis regulatory protein homolog, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_2458_0_1, dd_Smed_v6_2458_0_1, [RH, Score=105, Expect=1e-26]} {RNA1509_11321} {RNA1310_25851} {RNA815_15109}
13.	MligTC455_20815	11	0.23	Mlig455_026062	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_026062 {REF} {Length: 499} {NoTransDecoderORF} {RNA1509_46791} {RNA1310_10565.1} {RNA815_21345.1}
14.	MligTC455_22032	8	0.16	Mlig455_028012	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_028012 {REF} {Length: 1046} {NoTransDecoderORF} {RNA1310_59482} {RNA815_41482}

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