TomoSeq data search

Data search

Results for MligTC455_23650

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23650	345	7.18	Mlig455_018003	Neo: - Age: Down-Up-Up	XIAP	Mlig455_018003 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=41.6]; zinc-RING finger domain [PF14634.8, score=25.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; Prokaryotic RING finger family 4 [PF14447.8, score=20.6]; Ring finger domain [PF13639.8, score=19.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=18.5]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=52.8, Expect=5e-07]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=48.5, Expect=4e-06]} {RNA1509_15201, RNA1509_38547, RNA1509_52892} {RNA1310_14466, RNA1509_15201, RNA1509_52892} {RNA1509_15201, RNA1509_52892, RNA815_14326}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_23650

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.588	3.303	0.24394	0.88999
RegionR2	1.125	3.303	0.06743	0.31537
RegionR3	0.479	3.303	0.26373	0.80866
RegionR4	-0.877	3.303	0.14244	0.38646
RegionR5	-0.015	3.303	0.97329	1.00000
RegionR6	0.29	3.303	0.52303	1.00000
RegionR7	-0.111	3.303	0.84598	1.00000
RegionR8	0.698	3.303	0.28522	0.91254

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.463	3.303	0.57406	1.00000
RegenerationR2	0.119	3.303	0.80935	0.99280
RegenerationR3	0.409	3.303	0.46121	0.83839
RegenerationR4	0.489	3.303	0.41501	0.82337
RegenerationR5	0.105	3.303	0.82848	0.99720
RegenerationR6	-0.338	3.303	0.61157	0.87502
RegenerationBL	-0.65	3.303	0.49453	0.85949
RegenerationTP	0.369	3.303	0.60309	0.96260

Genes with expression patterns similar to MligTC455_23650

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23650	345	7.18	Mlig455_018003	Neo: - Age: Down-Up-Up	XIAP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018003 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=41.6]; zinc-RING finger domain [PF14634.8, score=25.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; Prokaryotic RING finger family 4 [PF14447.8, score=20.6]; Ring finger domain [PF13639.8, score=19.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=18.5]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=52.8, Expect=5e-07]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=48.5, Expect=4e-06]} {RNA1509_15201, RNA1509_38547, RNA1509_52892} {RNA1310_14466, RNA1509_15201, RNA1509_52892} {RNA1509_15201, RNA1509_52892, RNA815_14326}
2.	MligTC455_23649	663	13.81	Mlig455_007016, Mlig455_018000	Neo: - Age: - Region-enriched R2: 1.776/0.02231	XIAP	3.645	0.883	0.861	-	0.918	-	0.983	Mlig455_007016 {REF} {Length: 424} {NoTransDecoderORF} {RNA1509_15201} {RNA1310_8925} {RNA815_24293} Mlig455_018000 {REF} {Length: 1703} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=42.6]; zinc-RING finger domain [PF14634.8, score=26.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Prokaryotic RING finger family 4 [PF14447.8, score=21.6]; Ring finger domain [PF13639.8, score=20.7]; RING-type zinc-finger [PF13445.8, score=20.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.5]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=52.4, Expect=1e-07]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=52.4, Expect=1e-07]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=47.8, Expect=2e-06]} {RNA1509_38547} {RNA1310_14466} {RNA815_14326}
3.	MligTC455_18238	1037	21.6	Mlig455_017178, Mlig455_048127	Neo: Int S/G2/M Age: -	PCGF1	0.96	-	-	-	-	0.960	-	Mlig455_017178 {REF} {Length: 1075} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.3]; zinc-RING finger domain [PF14634.8, score=20.7]; Ring finger domain [PF13639.8, score=19.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.7]} {Human: ENSG00000115289, PCGF1, polycomb group ring finger 1, [Score=94.4, Expect=5e-23]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [Score=90.5, Expect=1e-20]; ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [Score=90.1, Expect=5e-21]} {Mouse: ENSMUSG00000069678, Pcgf1, polycomb group ring finger 1, [Score=94.4, Expect=3e-23]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [Score=92.0, Expect=9e-22]; ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [Score=90.1, Expect=3e-21]} {Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [Score=81.6, Expect=8e-19]} {Celegans: WBGene00008684, mig-32, [Score=67.8, Expect=3e-13]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [Score=87.8, Expect=2e-21]} {RNA1509_26747} {RNA1310_20203.1, RNA1509_26747} {RNA1509_26747, RNA815_27681} Mlig455_048127 {REF} {Length: 1650} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.3]; zinc-RING finger domain [PF14634.8, score=20.7]; Ring finger domain [PF13639.8, score=19.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.7]} {Human: ENSG00000115289, PCGF1, polycomb group ring finger 1, [Score=94.4, Expect=5e-23]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [Score=90.5, Expect=1e-20]; ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [Score=90.1, Expect=5e-21]} {Mouse: ENSMUSG00000069678, Pcgf1, polycomb group ring finger 1, [Score=94.4, Expect=3e-23]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [Score=92.0, Expect=9e-22]; ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [Score=90.1, Expect=3e-21]} {Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [Score=81.6, Expect=8e-19]} {Celegans: WBGene00008684, mig-32, [Score=67.8, Expect=3e-13]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [Score=87.8, Expect=2e-21]} {RNA1509_26747} {RNA1310_20203.1} {RNA815_27681}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23650

345

7.18

Mlig455_018003

Neo: -

Age: Down-Up-Up

XIAP

1.000

MligTC455_23649

663

13.81

Mlig455_007016, Mlig455_018000

Neo: -

Age: -

Region-enriched R2: 1.776/0.02231

XIAP

3.645

0.883

0.861

0.918

0.983

Mlig455_007016 {REF} {Length: 424} {NoTransDecoderORF} {RNA1509_15201} {RNA1310_8925} {RNA815_24293}

Mlig455_018000 {REF} {Length: 1703} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=42.6]; zinc-RING finger domain [PF14634.8, score=26.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Prokaryotic RING finger family 4 [PF14447.8, score=21.6]; Ring finger domain [PF13639.8, score=20.7]; RING-type zinc-finger [PF13445.8, score=20.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.5]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=52.4, Expect=1e-07]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=52.4, Expect=1e-07]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=47.8, Expect=2e-06]} {RNA1509_38547} {RNA1310_14466} {RNA815_14326}

MligTC455_18238

1037

21.6

Mlig455_017178, Mlig455_048127

Neo: Int S/G2/M

Age: -

PCGF1

0.96

0.960

Mlig455_017178 {REF} {Length: 1075} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.3]; zinc-RING finger domain [PF14634.8, score=20.7]; Ring finger domain [PF13639.8, score=19.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.7]} {Human: ENSG00000115289, PCGF1, polycomb group ring finger 1, [Score=94.4, Expect=5e-23]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [Score=90.5, Expect=1e-20]; ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [Score=90.1, Expect=5e-21]} {Mouse: ENSMUSG00000069678, Pcgf1, polycomb group ring finger 1, [Score=94.4, Expect=3e-23]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [Score=92.0, Expect=9e-22]; ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [Score=90.1, Expect=3e-21]} {Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [Score=81.6, Expect=8e-19]} {Celegans: WBGene00008684, mig-32, [Score=67.8, Expect=3e-13]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [Score=87.8, Expect=2e-21]} {RNA1509_26747} {RNA1310_20203.1, RNA1509_26747} {RNA1509_26747, RNA815_27681}

Mlig455_048127 {REF} {Length: 1650} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.3]; zinc-RING finger domain [PF14634.8, score=20.7]; Ring finger domain [PF13639.8, score=19.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.7]} {Human: ENSG00000115289, PCGF1, polycomb group ring finger 1, [Score=94.4, Expect=5e-23]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [Score=90.5, Expect=1e-20]; ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [Score=90.1, Expect=5e-21]} {Mouse: ENSMUSG00000069678, Pcgf1, polycomb group ring finger 1, [Score=94.4, Expect=3e-23]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [Score=92.0, Expect=9e-22]; ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [Score=90.1, Expect=3e-21]} {Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [Score=81.6, Expect=8e-19]} {Celegans: WBGene00008684, mig-32, [Score=67.8, Expect=3e-13]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [Score=87.8, Expect=2e-21]} {RNA1509_26747} {RNA1310_20203.1} {RNA815_27681}