M. lignano Tomo-Seq
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Results for MligTC455_23677

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23677 272 5.67 Mlig455_015243

Neo: -

Age: -

 GLI3 Mlig455_015243 {REF} {Length: 3723} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=57.2]; Zinc-finger double domain [PF13465.8, score=50.1]; FOXP coiled-coil domain [PF16159.7, score=32.1]} {Human: ENSG00000106571, GLI3, GLI family zinc finger 3, [RH, Score=260, Expect=6e-72]; ENSG00000074047, GLI2, GLI family zinc finger 2, [RH, Score=254, Expect=8e-70]} {Mouse: ENSMUSG00000021318, Gli3, GLI-Kruppel family member GLI3, [RH, Score=261, Expect=2e-72]; ENSMUSG00000048402, Gli2, GLI-Kruppel family member GLI2, [RH, Score=255, Expect=3e-70]} {Dmel: FBgn0004859, ci, cubitus interruptus, [RH, Score=262, Expect=5e-73]} {Celegans: WBGene00006604, tra-1, Sex-determining transformer protein 1, [RH, Score=213, Expect=3e-57]} {Smed: dd_Smed_v6_7470_0_1, dd_Smed_v6_7470_0_1, [RH, Score=261, Expect=2e-74]} {RNA1509_42010} {RNA1310_4433.1} {RNA815_6852}

Cumulative graph for MligTC455_23677

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.226 2.949 0.24954 0.89570
RegionR2 -0.282 2.949 0.92556 1.00000
RegionR3 0.406 2.949 0.65219 1.00000
RegionR4 0.292 2.949 0.73144 1.00000
RegionR5 0.339 2.949 0.68745 1.00000
RegionR6 1.665 2.949 0.02427 0.28368
RegionR7 1.829 2.949 0.04340 0.40096
RegionR8 0.977 2.949 0.44812 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.271 2.949 0.99996 1.00000
RegenerationR2 1.608 2.949 0.00542 0.11649
RegenerationR3 -0.15 2.949 0.81889 0.98723
RegenerationR4 -0.389 2.949 0.55992 0.89678
RegenerationR5 1.611 2.949 0.00465 0.12341
RegenerationR6 0.732 2.949 0.18817 0.52531
RegenerationBL -0.978 2.949 0.25765 0.61480
RegenerationTP 0.456 2.949 0.55481 0.93622


Genes with expression patterns similar to MligTC455_23677

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23677 272 5.67 Mlig455_015243

Neo: -

Age: -

 GLI3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_015243 {REF} {Length: 3723} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=57.2]; Zinc-finger double domain [PF13465.8, score=50.1]; FOXP coiled-coil domain [PF16159.7, score=32.1]} {Human: ENSG00000106571, GLI3, GLI family zinc finger 3, [RH, Score=260, Expect=6e-72]; ENSG00000074047, GLI2, GLI family zinc finger 2, [RH, Score=254, Expect=8e-70]} {Mouse: ENSMUSG00000021318, Gli3, GLI-Kruppel family member GLI3, [RH, Score=261, Expect=2e-72]; ENSMUSG00000048402, Gli2, GLI-Kruppel family member GLI2, [RH, Score=255, Expect=3e-70]} {Dmel: FBgn0004859, ci, cubitus interruptus, [RH, Score=262, Expect=5e-73]} {Celegans: WBGene00006604, tra-1, Sex-determining transformer protein 1, [RH, Score=213, Expect=3e-57]} {Smed: dd_Smed_v6_7470_0_1, dd_Smed_v6_7470_0_1, [RH, Score=261, Expect=2e-74]} {RNA1509_42010} {RNA1310_4433.1} {RNA815_6852}
2. MligTC455_46454 749 15.61 Mlig455_041629

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.395

 SLC33A1 0.961 - - - - 0.961 - Mlig455_041629 {REF} {Length: 2675} {TRANSSPLICED} {Pfam: Acetyl-coenzyme A transporter 1 [PF13000.9, score=234.0]} {Human: ENSG00000169359, SLC33A1, solute carrier family 33 member 1, [Score=287, Expect=2e-90]} {Mouse: ENSMUSG00000027822, Slc33a1, solute carrier family 33 (acetyl-CoA transporter), member 1, [Score=287, Expect=1e-90]} {Dmel: FBgn0036662, CG9706, [Score=292, Expect=8e-93]} {Celegans: WBGene00012033, T26C5.3, [Score=262, Expect=5e-81]} {Smed: dd_Smed_v6_6308_0_1, dd_Smed_v6_6308_0_1, [Score=355, Expect=1e-117]} {RNA1509_22184, RNA1509_8415} {RNA1310_9664, RNA1509_22184} {RNA1509_22184, RNA815_3329.1}

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