TomoSeq data search

Data search

Results for MligTC455_23722

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23722	454	9.46	Mlig455_015848, Mlig455_016067	Neo: - Age: Down-Down-Up	FBN3	Mlig455_015848 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: Calcium-binding EGF domain [PF07645.17, score=249.8]; Complement Clr-like EGF-like [PF12662.9, score=132.7]; EGF domain [PF12947.9, score=68.8]; Pvs28 EGF domain [PF06247.13, score=26.7]; MSP1 EGF domain 1 [PF12946.9, score=21.9]; Coagulation Factor Xa inhibitory site [PF14670.8, score=19.9]} {Human: ENSG00000142449, FBN3, fibrillin 3, [Score=198, Expect=3e-52]; ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=195, Expect=3e-51]; ENSG00000138829, FBN2, fibrillin 2, [Score=191, Expect=6e-50]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=196, Expect=5e-52]; ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=190, Expect=6e-50]; ENSMUSG00000001870, Ltbp1, latent transforming growth factor beta binding protein 1, [Score=187, Expect=5e-49]} {Dmel: FBgn0051999, CG31999, [Score=162, Expect=4e-41]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [RH, Score=194, Expect=1e-52]} {Smed: dd_Smed_v6_7311_0_1, dd_Smed_v6_7311_0_1, [RH, Score=256, Expect=2e-73]} {RNA1509_34964} {RNA1310_8832} {RNA815_9527} Mlig455_016067 {REF} {Length: 2600} {Pfam: Calcium-binding EGF domain [PF07645.17, score=241.4]; Complement Clr-like EGF-like [PF12662.9, score=121.7]; EGF domain [PF12947.9, score=63.2]; Pvs28 EGF domain [PF06247.13, score=26.5]; MSP1 EGF domain 1 [PF12946.9, score=21.1]} {Human: ENSG00000142449, FBN3, fibrillin 3, [Score=195, Expect=4e-51]; ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=189, Expect=4e-49]; ENSG00000138829, FBN2, fibrillin 2, [Score=188, Expect=6e-49]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=188, Expect=3e-49]; ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=187, Expect=9e-49]; ENSMUSG00000001870, Ltbp1, latent transforming growth factor beta binding protein 1, [Score=184, Expect=9e-48]; ENSMUSG00000027204, Fbn1, fibrillin 1, [Score=179, Expect=3e-46]} {Dmel: FBgn0051999, CG31999, [Score=158, Expect=8e-40]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [RH, Score=193, Expect=4e-52]} {Smed: dd_Smed_v6_7311_0_1, dd_Smed_v6_7311_0_1, [RH, Score=254, Expect=2e-72]} {RNA1509_34964} {RNA1310_8832, RNA1509_34964} {RNA1509_34964, RNA815_9527}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23722

454

9.46

Mlig455_015848, Mlig455_016067

Neo: -

Age: Down-Down-Up

FBN3

Mlig455_015848 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: Calcium-binding EGF domain [PF07645.17, score=249.8]; Complement Clr-like EGF-like [PF12662.9, score=132.7]; EGF domain [PF12947.9, score=68.8]; Pvs28 EGF domain [PF06247.13, score=26.7]; MSP1 EGF domain 1 [PF12946.9, score=21.9]; Coagulation Factor Xa inhibitory site [PF14670.8, score=19.9]} {Human: ENSG00000142449, FBN3, fibrillin 3, [Score=198, Expect=3e-52]; ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=195, Expect=3e-51]; ENSG00000138829, FBN2, fibrillin 2, [Score=191, Expect=6e-50]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=196, Expect=5e-52]; ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=190, Expect=6e-50]; ENSMUSG00000001870, Ltbp1, latent transforming growth factor beta binding protein 1, [Score=187, Expect=5e-49]} {Dmel: FBgn0051999, CG31999, [Score=162, Expect=4e-41]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [RH, Score=194, Expect=1e-52]} {Smed: dd_Smed_v6_7311_0_1, dd_Smed_v6_7311_0_1, [RH, Score=256, Expect=2e-73]} {RNA1509_34964} {RNA1310_8832} {RNA815_9527}

Mlig455_016067 {REF} {Length: 2600} {Pfam: Calcium-binding EGF domain [PF07645.17, score=241.4]; Complement Clr-like EGF-like [PF12662.9, score=121.7]; EGF domain [PF12947.9, score=63.2]; Pvs28 EGF domain [PF06247.13, score=26.5]; MSP1 EGF domain 1 [PF12946.9, score=21.1]} {Human: ENSG00000142449, FBN3, fibrillin 3, [Score=195, Expect=4e-51]; ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=189, Expect=4e-49]; ENSG00000138829, FBN2, fibrillin 2, [Score=188, Expect=6e-49]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=188, Expect=3e-49]; ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=187, Expect=9e-49]; ENSMUSG00000001870, Ltbp1, latent transforming growth factor beta binding protein 1, [Score=184, Expect=9e-48]; ENSMUSG00000027204, Fbn1, fibrillin 1, [Score=179, Expect=3e-46]} {Dmel: FBgn0051999, CG31999, [Score=158, Expect=8e-40]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [RH, Score=193, Expect=4e-52]} {Smed: dd_Smed_v6_7311_0_1, dd_Smed_v6_7311_0_1, [RH, Score=254, Expect=2e-72]} {RNA1509_34964} {RNA1310_8832, RNA1509_34964} {RNA1509_34964, RNA815_9527}

Cumulative graph for MligTC455_23722

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.345	3.52	0.33687	0.98310
RegionR2	0.587	3.52	0.30888	0.69956
RegionR3	-0.875	3.52	0.07982	0.50012
RegionR4	-0.995	3.52	0.10684	0.32167
RegionR5	-2.153	3.52	0.00004	0.00072
RegionR6	0.367	3.52	0.42485	0.99139
RegionR7	0.285	3.52	0.66429	1.00000
RegionR8	1.439	3.52	0.05309	0.44921

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.986	3.52	0.56063	1.00000
RegenerationR2	-0.067	3.52	0.87815	1.00000
RegenerationR3	0.174	3.52	0.76813	0.97093
RegenerationR4	0.88	3.52	0.12823	0.54268
RegenerationR5	1.061	3.52	0.06871	0.41217
RegenerationR6	-0.512	3.52	0.32461	0.67073
RegenerationBL	-0.713	3.52	0.25451	0.61151
RegenerationTP	-0.219	3.52	0.74016	1.00000

Genes with expression patterns similar to MligTC455_23722

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23722	454	9.46	Mlig455_015848, Mlig455_016067	Neo: - Age: Down-Down-Up	FBN3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015848 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: Calcium-binding EGF domain [PF07645.17, score=249.8]; Complement Clr-like EGF-like [PF12662.9, score=132.7]; EGF domain [PF12947.9, score=68.8]; Pvs28 EGF domain [PF06247.13, score=26.7]; MSP1 EGF domain 1 [PF12946.9, score=21.9]; Coagulation Factor Xa inhibitory site [PF14670.8, score=19.9]} {Human: ENSG00000142449, FBN3, fibrillin 3, [Score=198, Expect=3e-52]; ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=195, Expect=3e-51]; ENSG00000138829, FBN2, fibrillin 2, [Score=191, Expect=6e-50]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=196, Expect=5e-52]; ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=190, Expect=6e-50]; ENSMUSG00000001870, Ltbp1, latent transforming growth factor beta binding protein 1, [Score=187, Expect=5e-49]} {Dmel: FBgn0051999, CG31999, [Score=162, Expect=4e-41]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [RH, Score=194, Expect=1e-52]} {Smed: dd_Smed_v6_7311_0_1, dd_Smed_v6_7311_0_1, [RH, Score=256, Expect=2e-73]} {RNA1509_34964} {RNA1310_8832} {RNA815_9527} Mlig455_016067 {REF} {Length: 2600} {Pfam: Calcium-binding EGF domain [PF07645.17, score=241.4]; Complement Clr-like EGF-like [PF12662.9, score=121.7]; EGF domain [PF12947.9, score=63.2]; Pvs28 EGF domain [PF06247.13, score=26.5]; MSP1 EGF domain 1 [PF12946.9, score=21.1]} {Human: ENSG00000142449, FBN3, fibrillin 3, [Score=195, Expect=4e-51]; ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=189, Expect=4e-49]; ENSG00000138829, FBN2, fibrillin 2, [Score=188, Expect=6e-49]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=188, Expect=3e-49]; ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=187, Expect=9e-49]; ENSMUSG00000001870, Ltbp1, latent transforming growth factor beta binding protein 1, [Score=184, Expect=9e-48]; ENSMUSG00000027204, Fbn1, fibrillin 1, [Score=179, Expect=3e-46]} {Dmel: FBgn0051999, CG31999, [Score=158, Expect=8e-40]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [RH, Score=193, Expect=4e-52]} {Smed: dd_Smed_v6_7311_0_1, dd_Smed_v6_7311_0_1, [RH, Score=254, Expect=2e-72]} {RNA1509_34964} {RNA1310_8832, RNA1509_34964} {RNA1509_34964, RNA815_9527}
2.	MligTC455_29936	241	5.01	Mlig455_027834, Mlig455_032110, Mlig455_042040, Mlig455_053160, Mlig455_060013, Mlig455_068652	Neo: - Age: - Region-enriched R4: 2.807/0.01859		1.682	0.724	-	-	0.958	-	-	Mlig455_027834 {REF} {Length: 1462} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_032110 {REF} {Length: 440} {RNA1509_22369} {RNA1310_28603.1} {RNA815_3258.1} Mlig455_042040 {REF} {Length: 1211} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_053160 {REF} {Length: 1298} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_060013 {REF} {Length: 1463} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_068652 {REF} {Length: 1496} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}
3.	MligTC455_43303	180	3.75	Mlig455_001813	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.918		0.95	-	-	-	0.950	-	-	Mlig455_001813 {REF} {Length: 2537} {RNA1509_14667} {RNA1310_23413} {RNA815_13658}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts