TomoSeq data search

Data search

Results for MligTC455_23810

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23810	392	8.16	Mlig455_010678	Neo: - Age: - Region-enriched R5: 1.782/0.01980	NR1D1	Mlig455_010678 {REF} {Length: 5112} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=110.1]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=51.1]} {Human: ENSG00000126368, NR1D1, nuclear receptor subfamily 1 group D member 1, [RH, Score=139, Expect=3e-34]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [RH, Score=137, Expect=8e-34]} {Mouse: ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [RH, Score=139, Expect=2e-34]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [RH, Score=136, Expect=9e-34]} {Dmel: FBgn0004865, Eip78C, Ecdysone-induced protein 78C, [RH, Score=169, Expect=3e-44]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [RH, Score=142, Expect=8e-37]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=126, Expect=2e-30]} {RNA1509_16376} {RNA1310_14501, RNA1509_16376} {RNA1509_16376, RNA815_18811}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23810

392

8.16

Mlig455_010678

Neo: -

Age: -

Region-enriched R5: 1.782/0.01980

NR1D1

Mlig455_010678 {REF} {Length: 5112} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=110.1]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=51.1]} {Human: ENSG00000126368, NR1D1, nuclear receptor subfamily 1 group D member 1, [RH, Score=139, Expect=3e-34]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [RH, Score=137, Expect=8e-34]} {Mouse: ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [RH, Score=139, Expect=2e-34]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [RH, Score=136, Expect=9e-34]} {Dmel: FBgn0004865, Eip78C, Ecdysone-induced protein 78C, [RH, Score=169, Expect=3e-44]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [RH, Score=142, Expect=8e-37]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=126, Expect=2e-30]} {RNA1509_16376} {RNA1310_14501, RNA1509_16376} {RNA1509_16376, RNA815_18811}

Cumulative graph for MligTC455_23810

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.836	3.393	0.14929	0.76377
RegionR2	0.263	3.393	0.73466	1.00000
RegionR3	0.651	3.393	0.45236	0.96353
RegionR4	1.652	3.393	0.03238	0.14344
RegionR5	1.782	3.393	0.00237	0.01980
RegionR6	0.743	3.393	0.38812	0.96385
RegionR7	1.38	3.393	0.10830	0.62476
RegionR8	-0.636	3.393	0.96867	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.444	3.393	0.12080	0.85070
RegenerationR2	0.403	3.393	0.33941	0.77462
RegenerationR3	-0.276	3.393	0.57565	0.89684
RegenerationR4	-0.802	3.393	0.10975	0.50905
RegenerationR5	-0.173	3.393	0.67058	0.94111
RegenerationR6	0.237	3.393	0.64382	0.89515
RegenerationBL	0.752	3.393	0.23146	0.58285
RegenerationTP	1.019	3.393	0.15755	0.58524

Genes with expression patterns similar to MligTC455_23810

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23810	392	8.16	Mlig455_010678	Neo: - Age: - Region-enriched R5: 1.782/0.01980	NR1D1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010678 {REF} {Length: 5112} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=110.1]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=51.1]} {Human: ENSG00000126368, NR1D1, nuclear receptor subfamily 1 group D member 1, [RH, Score=139, Expect=3e-34]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [RH, Score=137, Expect=8e-34]} {Mouse: ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [RH, Score=139, Expect=2e-34]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [RH, Score=136, Expect=9e-34]} {Dmel: FBgn0004865, Eip78C, Ecdysone-induced protein 78C, [RH, Score=169, Expect=3e-44]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [RH, Score=142, Expect=8e-37]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=126, Expect=2e-30]} {RNA1509_16376} {RNA1310_14501, RNA1509_16376} {RNA1509_16376, RNA815_18811}
2.	MligTC455_23811	344	7.18	Mlig455_010778	Neo: - Age: - Region-enriched R5: 1.815/0.02411		5.693	0.889	0.998	0.996	0.919	0.933	0.958	Mlig455_010778 {REF} {Length: 564} {NoTransDecoderORF} {RNA1509_51726} {RNA1310_29942} {RNA815_18811}
3.	MligTC455_19855	903	18.8	Mlig455_052736	Neo: - Age: -	TMEM167B	0.965	-	-	-	0.965	-	-	Mlig455_052736 {REF} {Length: 816} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=39.2]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [Score=103, Expect=3e-30]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [Score=102, Expect=3e-30]} {Dmel: FBgn0040890, ksh, kish, [Score=42.7, Expect=1e-06]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=100, Expect=9e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=98.6, Expect=7e-29]} {RNA1509_49711, RNA1509_57502} {RNA1310_41303.1, RNA1509_49711, RNA1509_57502} {RNA1509_49711, RNA1509_57502, RNA815_21949}
4.	MligTC455_38520	900	18.76	Mlig455_001661	Neo: - Age: Up-Down-Up		0.952	-	-	-	-	-	0.952	Mlig455_001661 {REF} {Length: 6129} {Celegans: WBGene00018026, F35A5.4, [Score=57.8, Expect=3e-09]} {RNA1509_53419, RNA1509_58638} {RNA1310_30422, RNA1509_53419, RNA1509_58638} {RNA1509_53419, RNA1509_58638, RNA815_26566}
5.	MligTC455_38521	890	18.55	Mlig455_050104	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_050104 {REF} {Length: 4152} {Pfam: Prominin [PF05478.13, score=96.4]} {Smed: dd_Smed_v6_4461_0_1, dd_Smed_v6_4461_0_1, [Score=102, Expect=3e-22]} {RNA1509_10987} {RNA1310_3341.1} {RNA815_9271}