Data search
Results for MligTC455_23844
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23844 | 66 | 1.38 | Mlig455_012645 | Neo: - Age: logFC(26M/2M)=-0.815 |
ANKS1A | Mlig455_012645 {REF} {Length: 1844} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=50.3]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.4]; SAM domain (Sterile alpha motif) [PF00536.32, score=31.3]} {Human: ENSG00000064999, ANKS1A, ankyrin repeat and sterile alpha motif domain containing 1A, [Score=120, Expect=3e-28]} {Mouse: ENSMUSG00000024219, Anks1, ankyrin repeat and SAM domain containing 1, [RH, Score=130, Expect=5e-32]} {Dmel: FBgn0039075, CG4393, [Score=85.9, Expect=2e-17]} {RNA1310_16792} {RNA815_16594} |
Cumulative graph for MligTC455_23844
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.198 | 1.615 | 0.99964 | 1.00000 | |
| RegionR2 | 0.538 | 1.615 | 0.64307 | 0.98024 | |
| RegionR3 | 1.031 | 1.615 | 0.42485 | 0.94669 | |
| RegionR4 | 0.666 | 1.615 | 0.55570 | 0.87578 | |
| RegionR5 | 1.514 | 1.615 | 0.20328 | 0.49537 | |
| RegionR6 | 1.252 | 1.615 | 0.34575 | 0.93157 | |
| RegionR7 | 2.652 | 1.615 | 0.05510 | 0.45174 | |
| RegionR8 | -3.455 | 1.615 | 0.99955 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.005 | 1.615 | 0.99998 | 1.00000 | |
| RegenerationR2 | -0.112 | 1.615 | 0.93272 | 1.00000 | |
| RegenerationR3 | 1.353 | 1.615 | 0.19291 | 0.62868 | |
| RegenerationR4 | 0.481 | 1.615 | 0.64478 | 0.93044 | |
| RegenerationR5 | 0.492 | 1.615 | 0.56876 | 0.89541 | |
| RegenerationR6 | 0.754 | 1.615 | 0.47455 | 0.78785 | |
| RegenerationBL | 1.998 | 1.615 | 0.21029 | 0.55353 | |
| RegenerationTP | 0.409 | 1.615 | 0.73818 | 1.00000 |
Genes with expression patterns similar to MligTC455_23844
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23844 | 66 | 1.38 | Mlig455_012645 | Neo: - Age: logFC(26M/2M)=-0.815 |
ANKS1A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012645 {REF} {Length: 1844} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=50.3]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.4]; SAM domain (Sterile alpha motif) [PF00536.32, score=31.3]} {Human: ENSG00000064999, ANKS1A, ankyrin repeat and sterile alpha motif domain containing 1A, [Score=120, Expect=3e-28]} {Mouse: ENSMUSG00000024219, Anks1, ankyrin repeat and SAM domain containing 1, [RH, Score=130, Expect=5e-32]} {Dmel: FBgn0039075, CG4393, [Score=85.9, Expect=2e-17]} {RNA1310_16792} {RNA815_16594} |
| 2. | MligTC455_06487 | 5 | 0.1 | Mlig455_020939 | Neo: - Age: - |
FBXL7 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_020939 {REF} {Length: 2961} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=50.8]; F-box domain [PF00646.35, score=34.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=24.7]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=57.0, Expect=5e-08]; ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=55.8, Expect=1e-07]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=58.2, Expect=1e-08]; ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=55.8, Expect=8e-08]} {Dmel: FBgn0033639, CG9003, [Score=52.8, Expect=5e-07]} {RNA1509_29618} {RNA1310_44617} {RNA815_54056} |
| 3. | MligTC455_15385 | 28 | 0.57 | Mlig455_011155 | Neo: - Age: - |
ARF6 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_011155 {REF} {Length: 2428} {Pfam: ADP-ribosylation factor family [PF00025.23, score=242.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.0]; Ras family [PF00071.24, score=51.9]; Signal recognition particle receptor beta subunit [PF09439.12, score=48.8]; G-protein alpha subunit [PF00503.22, score=38.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=29.5]; 50S ribosome-binding GTPase [PF01926.25, score=22.1]; 6-phosphofructo-2-kinase [PF01591.20, score=17.9]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [RH, Score=295, Expect=4e-103]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [RH, Score=295, Expect=3e-103]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [RH, Score=290, Expect=3e-101]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [RH, Score=282, Expect=2e-98]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [RH, Score=277, Expect=1e-96]} {RNA1509_33843, RNA1509_35985} {RNA1310_23978, RNA1509_33843} {RNA1509_33843, RNA815_10175} |
| 4. | MligTC455_23793 | 99 | 2.07 | Mlig455_033726 | Neo: - Age: - |
CDK6 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_033726 {REF} {Length: 2878} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.8]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=140, Expect=3e-37]; ENSG00000135446, CDK4, cyclin dependent kinase 4, [Score=138, Expect=9e-37]} {Mouse: ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=149, Expect=1e-41]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=137, Expect=2e-36]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=120, Expect=1e-30]} {Smed: dd_Smed_v6_6179_0_5, dd_Smed_v6_6179_0_5, [Score=135, Expect=3e-36]} {RNA1509_24860} {RNA1310_17562} {RNA815_8098} |
| 5. | MligTC455_45574 | 268 | 5.59 | Mlig455_022423, Mlig455_031777 | Neo: - Age: logFC(26M/2M)=0.309 Region-enriched R5: 1.751/0.01543 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_022423 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Chromadorea ALT protein [PF05535.14, score=19.1]} {RNA1509_34065} {RNA1310_25357, RNA1509_34065} {RNA1509_34065, RNA815_10509.1} Mlig455_031777 {REF} {Length: 3095} {TRANSSPLICED} {Pfam: Chromadorea ALT protein [PF05535.14, score=19.1]} {RNA1509_34065} {RNA1310_25357} {RNA815_10509.1} |
|
| 6. | MligTC455_23761 | 37 | 0.77 | Mlig455_013965 | Neo: Irradiation Age: - Region-enriched R4: 4.509/0.01280 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_013965 {REF} {Length: 3057} {TRANSSPLICED} {RNA1509_15627, RNA1509_58623, RNA1509_59327} {RNA1310_7136.1, RNA1509_15627, RNA1509_58623, RNA1509_59327} {RNA1509_15627, RNA1509_58623, RNA1509_59327, RNA815_6259} | |
| 7. | MligTC455_45190 | 287 | 5.97 | Mlig455_068460, Mlig455_068473 | Neo: - Age: logFC(26M/2M)=-0.777 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_068460 {REF} {Length: 2067} {TRANSSPLICED} {Pfam: Cytochrome oxidase complex assembly protein 1 [PF08695.12, score=21.0]} {RNA1509_19562, RNA1509_48549} {RNA1310_48235, RNA1509_48549} {RNA1509_48549, RNA815_24890} Mlig455_068473 {REF} {Length: 1783} {TRANSSPLICED} {Pfam: Cytochrome oxidase complex assembly protein 1 [PF08695.12, score=21.0]} {RNA1509_19562, RNA1509_20020} {RNA1310_48235, RNA1509_20020} {RNA1509_20020, RNA815_24890} |
|
| 8. | MligTC455_53080 | 183 | 3.81 | Mlig455_033529 | Neo: Irradiation Age: Up-Down-Up |
FANCD2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_033529 {REF} {Length: 5286} {TRANSSPLICED} {Pfam: Fanconi anaemia protein FancD2 nuclease [PF14631.8, score=216.3]} {Human: ENSG00000144554, FANCD2, FA complementation group D2, [RH, Score=131, Expect=6e-30]} {Mouse: ENSMUSG00000034023, Fancd2, Fanconi anemia, complementation group D2, [RH, Score=132, Expect=2e-30]} {Smed: dd_Smed_v6_12881_0_1, dd_Smed_v6_12881_0_1, [RH, Score=70.9, Expect=5e-12]} {RNA1509_14338, RNA1509_52086, RNA1509_57752} {RNA1310_1038, RNA1509_14338, RNA1509_52086, RNA1509_57752} {RNA1509_14338, RNA1509_52086, RNA1509_57752, RNA815_21338} |
| 9. | MligTC455_17407 | 327 | 6.8 | Mlig455_044727 | Neo: Irradiation Age: - Region-enriched R5: 2.345/0.00045 |
ZNRF2 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_044727 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=39.0]; RING-like zinc finger [PF17123.7, score=26.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; RING-type zinc-finger [PF13445.8, score=20.4]} {Human: ENSG00000180233, ZNRF2, zinc and ring finger 2, [RH, Score=145, Expect=8e-42]} {Mouse: ENSMUSG00000058446, Znrf2, zinc and ring finger 2, [RH, Score=147, Expect=8e-43]} {Dmel: FBgn0029911, CG14435, [RH, Score=145, Expect=3e-41]} {Celegans: WBGene00022115, Y71F9AL.10, [RH, Score=144, Expect=4e-42]} {Smed: dd_Smed_v6_2436_0_1, dd_Smed_v6_2436_0_1, [RH, Score=130, Expect=1e-36]} {RNA1509_37305} {RNA1310_28658} {RNA815_2923} |
Berezikov Lab - 2020-2021 © ERIBA