TomoSeq data search

Data search

Results for MligTC455_23860

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23860

143

2.98

Mlig455_027744, Mlig455_050076

Neo: -

Age: Up-Down-Up

GTF2IRD2B, TADA2B

Mlig455_027744 {REF} {Length: 3510} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=22.3]} {Human: ENSG00000173011, TADA2B, transcriptional adaptor 2B, [Score=130, Expect=1e-32]} {Mouse: ENSMUSG00000029196, Tada2b, transcriptional adaptor 2B, [Score=130, Expect=1e-32]} {Dmel: FBgn0037555, Ada2b, transcriptional Adaptor 2b, [Score=109, Expect=5e-25]} {Smed: dd_Smed_v6_7427_0_1, dd_Smed_v6_7427_0_1, [Score=129, Expect=4e-32]} {RNA1509_56799} {RNA1310_15578.1} {RNA815_38175}

Mlig455_050076 {REF} {Length: 581} {Human: ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=114, Expect=5e-29]; ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=113, Expect=7e-29]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=96.7, Expect=4e-23]} {Smed: dd_Smed_v6_34552_0_7, dd_Smed_v6_34552_0_7, [RH, Score=94.0, Expect=5e-25]} {RNA1509_47691} {RNA1310_5733} {RNA815_53316}

Cumulative graph for MligTC455_23860

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.611	2.198	0.72397	1.00000
RegionR2	-0.032	2.198	0.96825	1.00000
RegionR3	0.209	2.198	0.71348	1.00000
RegionR4	-0.039	2.198	0.96167	1.00000
RegionR5	0.579	2.198	0.24180	0.55383
RegionR6	-1.049	2.198	0.14896	0.68804
RegionR7	-0.767	2.198	0.43895	1.00000
RegionR8	0.488	2.198	0.62335	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.553	2.198	0.29629	0.99329
RegenerationR2	0.486	2.198	0.36740	0.79399
RegenerationR3	-0.498	2.198	0.45356	0.83357
RegenerationR4	0.155	2.198	0.82136	0.99460
RegenerationR5	0.31	2.198	0.55820	0.89011
RegenerationR6	0.931	2.198	0.25511	0.60529
RegenerationBL	1.05	2.198	0.22750	0.57758
RegenerationTP	-0.342	2.198	0.75101	1.00000

Genes with expression patterns similar to MligTC455_23860

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23860	143	2.98	Mlig455_027744, Mlig455_050076	Neo: - Age: Up-Down-Up	GTF2IRD2B, TADA2B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027744 {REF} {Length: 3510} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=22.3]} {Human: ENSG00000173011, TADA2B, transcriptional adaptor 2B, [Score=130, Expect=1e-32]} {Mouse: ENSMUSG00000029196, Tada2b, transcriptional adaptor 2B, [Score=130, Expect=1e-32]} {Dmel: FBgn0037555, Ada2b, transcriptional Adaptor 2b, [Score=109, Expect=5e-25]} {Smed: dd_Smed_v6_7427_0_1, dd_Smed_v6_7427_0_1, [Score=129, Expect=4e-32]} {RNA1509_56799} {RNA1310_15578.1} {RNA815_38175} Mlig455_050076 {REF} {Length: 581} {Human: ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=114, Expect=5e-29]; ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=113, Expect=7e-29]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=96.7, Expect=4e-23]} {Smed: dd_Smed_v6_34552_0_7, dd_Smed_v6_34552_0_7, [RH, Score=94.0, Expect=5e-25]} {RNA1509_47691} {RNA1310_5733} {RNA815_53316}
2.	MligTC455_23029	200	4.16	Mlig455_043356	Neo: - Age: Up-Down-Down Region-enriched R2: 2.584/0.02978	ABL1	1.752	-	-	0.954	-	-	0.798	Mlig455_043356 {REF} {Length: 5848} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=320.1]; Protein kinase domain [PF00069.27, score=153.7]; SH2 domain [PF00017.26, score=78.5]; F-actin binding [PF08919.12, score=34.5]; Variant SH3 domain [PF14604.8, score=20.6]; SH3 domain [PF00018.30, score=18.8]} {Human: ENSG00000097007, ABL1, ABL proto-oncogene 1, non-receptor tyrosine kinase, [RH, Score=548, Expect=1e-176]; ENSG00000143322, ABL2, ABL proto-oncogene 2, non-receptor tyrosine kinase, [RH, Score=543, Expect=3e-174]} {Mouse: ENSMUSG00000026842, Abl1, c-abl oncogene 1, non-receptor tyrosine kinase, [RH, Score=549, Expect=2e-177]; ENSMUSG00000026596, Abl2, v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene), [RH, Score=538, Expect=9e-174]} {Dmel: FBgn0000017, Abl, Abl tyrosine kinase, [RH, Score=548, Expect=3e-172]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [RH, Score=517, Expect=2e-164]} {Smed: dd_Smed_v6_4352_0_1, dd_Smed_v6_4352_0_1, [RH, Score=555, Expect=0.0]} {RNA1509_21216, RNA1509_50452} {RNA1310_7858, RNA1509_50452} {RNA1509_50452, RNA815_21818}
3.	MligTC455_19211	107	2.23	Mlig455_052588	Neo: - Age: - Region-enriched R8: 3.795/0.01587		0.972	-	-	0.972	-	-	-	Mlig455_052588 {REF} {Length: 2340} {Celegans: WBGene00019180, H10D18.5, [RH, Score=62.4, Expect=6e-11]} {Smed: dd_Smed_v6_10251_0_1, dd_Smed_v6_10251_0_1, [RH, Score=95.9, Expect=2e-23]} {RNA1509_8096} {RNA1310_25906} {RNA815_14581.1}
4.	MligTC455_36981	59	1.23	Mlig455_050314	Neo: - Age: - Region-enriched R2: 4.760/0.03524	ASIC5	0.972	-	-	0.972	-	-	-	Mlig455_050314 {REF} {Length: 3328} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=158.3]; Kringle domain [PF00051.20, score=20.5]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=59.3, Expect=2e-08]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=51.6, Expect=3e-06]} {Smed: dd_Smed_v6_16557_0_1, dd_Smed_v6_16557_0_1, [Score=52.8, Expect=6e-07]} {RNA1310_9846.1} {RNA815_21595}
5.	MligTC455_28744	162	3.37	Mlig455_011019	Neo: - Age: Down-Up-Down	ITPR1	0.962	-	-	0.962	-	-	-	Mlig455_011019 {REF} {Length: 3051} {Pfam: Ion transport protein [PF00520.33, score=20.4]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=114, Expect=7e-26]; ENSMUSG00000030592, Ryr1, ryanodine receptor 1, skeletal muscle, [Score=109, Expect=2e-24]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=97.4, Expect=9e-21]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=111, Expect=2e-25]} {Smed: dd_Smed_v6_3814_1_2, dd_Smed_v6_3814_1_2, [Score=447, Expect=6e-150]} {RNA1509_25537} {RNA1310_434.1} {RNA815_10022}
6.	MligTC455_28745	165	3.43	Mlig455_011834	Neo: - Age: Up-Down-Up	ITPR1	0.962	-	-	0.962	-	-	-	Mlig455_011834 {REF} {Length: 9842} {Pfam: RIH domain [PF01365.23, score=97.3]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=68.7]; RyR and IP3R Homology associated [PF08454.13, score=66.6]; MIR domain [PF02815.21, score=57.6]; Ion transport protein [PF00520.33, score=21.7]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=226, Expect=3e-58]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=225, Expect=6e-58]; ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=220, Expect=2e-56]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=229, Expect=3e-59]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=154, Expect=9e-37]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=142, Expect=2e-33]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [RH, Score=3006, Expect=0.0]} {RNA1509_2749, RNA1509_40391} {RNA1310_434.2, RNA1509_40391} {RNA1509_40391, RNA815_1122}
7.	MligTC455_50328	128	2.66	Mlig455_039843	Neo: - Age: -	SCNN1B	0.962	-	-	0.962	-	-	-	Mlig455_039843 {REF} {Length: 2793} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=206.6]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=69.3, Expect=1e-11]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=58.9, Expect=1e-08]; ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.4, Expect=4e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=75.5, Expect=8e-14]} {Smed: dd_Smed_v6_23028_0_1, dd_Smed_v6_23028_0_1, [RH, Score=366, Expect=3e-118]} {RNA1509_37054} {RNA1310_10450, RNA1509_37054} {RNA1509_37054, RNA815_17111}
8.	MligTC455_12392	59	1.23	Mlig455_065560	Neo: - Age: -	SSTR5	0.961	-	-	0.961	-	-	-	Mlig455_065560 {REF} {Length: 2085} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=121.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.4]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=25.3]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=92.0, Expect=1e-19]; ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=89.4, Expect=1e-18]} {Mouse: ENSMUSG00000045052, Prlhr, prolactin releasing hormone receptor, [Score=104, Expect=5e-24]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=103, Expect=1e-23]; ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=102, Expect=2e-23]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=114, Expect=6e-27]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=101, Expect=4e-23]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [Score=191, Expect=5e-54]} {RNA1509_59439} {RNA1310_49826} {RNA815_38569}
9.	MligTC455_36543	145	3.03	Mlig455_067860	Neo: - Age: Down-Up-Up	MFSD8	0.957	-	-	0.957	-	-	-	Mlig455_067860 {REF} {Length: 3751} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.6]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=61.2, Expect=2e-09]} {Mouse: ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=58.2, Expect=2e-09]; ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=58.2, Expect=2e-09]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=369, Expect=7e-123]} {RNA1509_54938} {RNA1310_19930} {RNA815_20915}
10.	MligTC455_21654	221	4.61	Mlig455_020914	Neo: - Age: logFC(26M/2M)=-0.339		0.954	-	-	-	-	0.954	-	Mlig455_020914 {REF} {Length: 2571} {Mouse: ENSMUSG00000041849, Card6, caspase recruitment domain family, member 6, [Score=56.6, Expect=8e-08]} {RNA1509_54821} {RNA1310_10560.1, RNA1509_54821} {RNA1509_54821, RNA815_15227}
11.	MligTC455_33474	29	0.61	Mlig455_066685	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_066685 {REF} {Length: 538} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}
12.	MligTC455_43502	87	1.81	Mlig455_049275, Mlig455_050621	Neo: - Age: Down-Down-Up Region-enriched R8: 4.055/0.04204	GPR139	0.952	-	-	0.952	-	-	-	Mlig455_049275 {REF} {Length: 1973} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=70.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=40.7]} {Human: ENSG00000180269, GPR139, G protein-coupled receptor 139, [Score=51.2, Expect=2e-06]} {Mouse: ENSMUSG00000066197, Gpr139, G protein-coupled receptor 139, [Score=49.7, Expect=3e-06]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=73.6, Expect=8e-14]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=64.3, Expect=4e-11]} {Smed: dd_Smed_v6_9550_0_1, dd_Smed_v6_9550_0_1, [Score=167, Expect=2e-47]} {RNA1509_46026} {RNA1310_15406} {RNA815_32015} Mlig455_050621 {REF} {Length: 2103} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=70.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=39.9]} {Human: ENSG00000180269, GPR139, G protein-coupled receptor 139, [Score=49.3, Expect=6e-06]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=72.8, Expect=1e-13]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=60.8, Expect=5e-10]} {Smed: dd_Smed_v6_9550_0_1, dd_Smed_v6_9550_0_1, [RH, Score=168, Expect=7e-48]} {RNA1509_7660} {RNA1310_15406} {RNA815_32015}
13.	MligTC455_12187	171	3.55	Mlig455_035674	Neo: - Age: logFC(26M/2M)=0.689	HSD17B8	0.951	-	-	0.951	-	-	-	Mlig455_035674 {REF} {Length: 2526} {Pfam: Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=170.4]; short chain dehydrogenase [PF00106.27, score=131.4]; KR domain [PF08659.12, score=29.1]} {Human: ENSG00000112474, HSD17B8, hydroxysteroid 17-beta dehydrogenase 8, [RH, Score=105, Expect=6e-26]; ENSG00000228357, HSD17B8, hydroxysteroid 17-beta dehydrogenase 8, [RH, Score=105, Expect=6e-26]; ENSG00000232357, HSD17B8, hydroxysteroid 17-beta dehydrogenase 8, [RH, Score=105, Expect=6e-26]; ENSG00000204228, HSD17B8, hydroxysteroid 17-beta dehydrogenase 8, [RH, Score=105, Expect=6e-26]; ENSG00000228712, HSD17B8, hydroxysteroid 17-beta dehydrogenase 8, [RH, Score=105, Expect=6e-26]; ENSG00000225312, HSD17B8, hydroxysteroid 17-beta dehydrogenase 8, [RH, Score=105, Expect=6e-26]} {Mouse: ENSMUSG00000030825, Hsd17b14, hydroxysteroid (17-beta) dehydrogenase 14, [Score=123, Expect=1e-32]} {Dmel: FBgn0040349, CG3699, [Score=109, Expect=6e-28]} {Celegans: WBGene00000974, dhs-11, DeHydrogenases, Short chain, [Score=93.2, Expect=4e-22]} {Smed: dd_Smed_v6_2290_0_1, dd_Smed_v6_2290_0_1, [Score=97.8, Expect=1e-23]} {RNA1509_6455} {RNA1310_4640} {RNA815_8535.1}
14.	MligTC455_13333	116	2.42	Mlig455_017077	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_017077 {REF} {Length: 2070} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=19.5]} {RNA1509_11472} {RNA1310_17969} {RNA815_7860}
15.	MligTC455_14578	33	0.69	Mlig455_033066	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_033066 {REF} {Length: 2292} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=137.2]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [Score=63.9, Expect=1e-10]} {RNA1310_28762} {RNA815_42177}

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