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Data search

Results for MligTC455_23893

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23893	18	0.39	Mlig455_032717, Mlig455_032741	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.330	RNF122	Mlig455_032717 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=49.8]; RING-H2 zinc finger domain [PF12678.9, score=43.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; zinc-RING finger domain [PF14634.8, score=31.6]; RING-type zinc-finger [PF13445.8, score=28.7]; RING-like zinc finger [PF17123.7, score=26.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.1]; Zinc-ribbon, C4HC2 type [PF17120.7, score=24.3]} {Human: ENSG00000133874, RNF122, ring finger protein 122, [RH, Score=60.8, Expect=2e-12]} {Mouse: ENSMUSG00000055850, Rnf181, ring finger protein 181, [RH, Score=60.8, Expect=5e-13]; ENSMUSG00000102720, Rnf181, ring finger protein 181, [RH, Score=60.8, Expect=5e-13]; ENSMUSG00000039328, Rnf122, ring finger protein 122, [RH, Score=59.3, Expect=5e-12]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=56.6, Expect=2e-10]} {Celegans: WBGene00019185, H10E21.5, [Score=52.4, Expect=3e-09]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=56.2, Expect=1e-10]} {RNA1509_55589} {RNA1310_38730} {RNA815_17740} Mlig455_032741 {REF} {Length: 690} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=49.8]; RING-H2 zinc finger domain [PF12678.9, score=44.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; zinc-RING finger domain [PF14634.8, score=31.6]; RING-type zinc-finger [PF13445.8, score=28.7]; RING-like zinc finger [PF17123.7, score=26.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.1]; Zinc-ribbon, C4HC2 type [PF17120.7, score=24.5]} {Human: ENSG00000133874, RNF122, ring finger protein 122, [Score=58.5, Expect=2e-11]} {Mouse: ENSMUSG00000055850, Rnf181, ring finger protein 181, [RH, Score=59.7, Expect=1e-12]; ENSMUSG00000102720, Rnf181, ring finger protein 181, [RH, Score=59.7, Expect=1e-12]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=55.8, Expect=4e-10]} {Celegans: WBGene00019185, H10E21.5, [Score=52.8, Expect=3e-09]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=56.6, Expect=9e-11]} {RNA1509_55589} {RNA1310_38730} {RNA815_17740}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23893

0.39

Mlig455_032717, Mlig455_032741

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.330

RNF122

Mlig455_032717 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=49.8]; RING-H2 zinc finger domain [PF12678.9, score=43.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; zinc-RING finger domain [PF14634.8, score=31.6]; RING-type zinc-finger [PF13445.8, score=28.7]; RING-like zinc finger [PF17123.7, score=26.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.1]; Zinc-ribbon, C4HC2 type [PF17120.7, score=24.3]} {Human: ENSG00000133874, RNF122, ring finger protein 122, [RH, Score=60.8, Expect=2e-12]} {Mouse: ENSMUSG00000055850, Rnf181, ring finger protein 181, [RH, Score=60.8, Expect=5e-13]; ENSMUSG00000102720, Rnf181, ring finger protein 181, [RH, Score=60.8, Expect=5e-13]; ENSMUSG00000039328, Rnf122, ring finger protein 122, [RH, Score=59.3, Expect=5e-12]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=56.6, Expect=2e-10]} {Celegans: WBGene00019185, H10E21.5, [Score=52.4, Expect=3e-09]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=56.2, Expect=1e-10]} {RNA1509_55589} {RNA1310_38730} {RNA815_17740}

Mlig455_032741 {REF} {Length: 690} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=49.8]; RING-H2 zinc finger domain [PF12678.9, score=44.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; zinc-RING finger domain [PF14634.8, score=31.6]; RING-type zinc-finger [PF13445.8, score=28.7]; RING-like zinc finger [PF17123.7, score=26.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.1]; Zinc-ribbon, C4HC2 type [PF17120.7, score=24.5]} {Human: ENSG00000133874, RNF122, ring finger protein 122, [Score=58.5, Expect=2e-11]} {Mouse: ENSMUSG00000055850, Rnf181, ring finger protein 181, [RH, Score=59.7, Expect=1e-12]; ENSMUSG00000102720, Rnf181, ring finger protein 181, [RH, Score=59.7, Expect=1e-12]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=55.8, Expect=4e-10]} {Celegans: WBGene00019185, H10E21.5, [Score=52.8, Expect=3e-09]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=56.6, Expect=9e-11]} {RNA1509_55589} {RNA1310_38730} {RNA815_17740}

Cumulative graph for MligTC455_23893

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.043	0.931	0.99975	1.00000
RegionR2	4.584	0.931	0.01777	0.14224
RegionR3	1.338	0.931	0.20166	0.74162
RegionR4	-0.646	0.931	0.96927	1.00000
RegionR5	2.472	0.931	0.11069	0.32702
RegionR6	0.736	0.931	0.45698	1.00000
RegionR7	-2.004	0.931	0.99956	1.00000
RegionR8	-1.438	0.931	0.99962	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.675	0.931	0.99992	1.00000
RegenerationR2	-0.649	0.931	0.67181	0.94599
RegenerationR3	3.409	0.931	0.01384	0.21605
RegenerationR4	0.505	0.931	0.85495	1.00000
RegenerationR5	1.966	0.931	0.02005	0.24473
RegenerationR6	1.774	0.931	0.93110	1.00000
RegenerationBL	2.647	0.931	0.99987	1.00000
RegenerationTP	6.182	0.931	0.01314	0.19519

Genes with expression patterns similar to MligTC455_23893

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23893	18	0.39	Mlig455_032717, Mlig455_032741	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.330	RNF122	3	1.000	1.000	-	-	-	1.000	Mlig455_032717 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=49.8]; RING-H2 zinc finger domain [PF12678.9, score=43.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; zinc-RING finger domain [PF14634.8, score=31.6]; RING-type zinc-finger [PF13445.8, score=28.7]; RING-like zinc finger [PF17123.7, score=26.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.1]; Zinc-ribbon, C4HC2 type [PF17120.7, score=24.3]} {Human: ENSG00000133874, RNF122, ring finger protein 122, [RH, Score=60.8, Expect=2e-12]} {Mouse: ENSMUSG00000055850, Rnf181, ring finger protein 181, [RH, Score=60.8, Expect=5e-13]; ENSMUSG00000102720, Rnf181, ring finger protein 181, [RH, Score=60.8, Expect=5e-13]; ENSMUSG00000039328, Rnf122, ring finger protein 122, [RH, Score=59.3, Expect=5e-12]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=56.6, Expect=2e-10]} {Celegans: WBGene00019185, H10E21.5, [Score=52.4, Expect=3e-09]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=56.2, Expect=1e-10]} {RNA1509_55589} {RNA1310_38730} {RNA815_17740} Mlig455_032741 {REF} {Length: 690} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=49.8]; RING-H2 zinc finger domain [PF12678.9, score=44.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; zinc-RING finger domain [PF14634.8, score=31.6]; RING-type zinc-finger [PF13445.8, score=28.7]; RING-like zinc finger [PF17123.7, score=26.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.1]; Zinc-ribbon, C4HC2 type [PF17120.7, score=24.5]} {Human: ENSG00000133874, RNF122, ring finger protein 122, [Score=58.5, Expect=2e-11]} {Mouse: ENSMUSG00000055850, Rnf181, ring finger protein 181, [RH, Score=59.7, Expect=1e-12]; ENSMUSG00000102720, Rnf181, ring finger protein 181, [RH, Score=59.7, Expect=1e-12]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=55.8, Expect=4e-10]} {Celegans: WBGene00019185, H10E21.5, [Score=52.8, Expect=3e-09]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=56.6, Expect=9e-11]} {RNA1509_55589} {RNA1310_38730} {RNA815_17740}
2.	MligTC455_50820	654	13.62	Mlig455_052392	Neo: Irradiation Age: Down-Up-Up		0.965	-	-	-	-	-	0.965	Mlig455_052392 {REF} {Length: 2159} {Pfam: Major Facilitator Superfamily [PF07690.18, score=79.9]} {Celegans: WBGene00017369, F10G7.5, [Score=109, Expect=1e-25]} {Smed: dd_Smed_v6_5351_0_2, dd_Smed_v6_5351_0_2, [Score=182, Expect=5e-52]} {RNA1509_43398} {RNA1310_11789.1, RNA1509_43398} {RNA1509_43398, RNA815_4854}
3.	MligTC455_17311	130	2.71	Mlig455_018523	Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 2.334/0.00107		0.95	-	-	-	-	-	0.950	Mlig455_018523 {REF} {Length: 1992} {RNA1509_59995} {RNA1310_14658} {RNA815_25339}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts