Data search
Results for MligTC455_23899
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23899 | 440 | 9.16 | Mlig455_070517 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 2.530/0.00192 |
Mlig455_070517 {REF} {Length: 1907} {Pfam: DDE superfamily endonuclease [PF13358.8, score=31.3]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [RH, Score=88.6, Expect=1e-21]} {RNA1509_53057} {RNA1310_22537.1} {RNA815_10659} |
Cumulative graph for MligTC455_23899
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.546 | 3.696 | 0.09623 | 0.65935 | |
| RegionR2 | 1.146 | 3.696 | 0.26921 | 0.65279 | |
| RegionR3 | 1.113 | 3.696 | 0.23659 | 0.77808 | |
| RegionR4 | 2.164 | 3.696 | 0.00791 | 0.05115 | |
| RegionR5 | 2.53 | 3.696 | 0.00012 | 0.00192 | |
| RegionR6 | 0.955 | 3.696 | 0.32526 | 0.91365 | |
| RegionR7 | 1.069 | 3.696 | 0.32797 | 0.96258 | |
| RegionR8 | -2.431 | 3.696 | 0.99966 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.005 | 3.696 | 0.99999 | 1.00000 | |
| RegenerationR2 | 0.165 | 3.696 | 0.77159 | 0.98081 | |
| RegenerationR3 | 1.1 | 3.696 | 0.06951 | 0.44227 | |
| RegenerationR4 | 0.399 | 3.696 | 0.52091 | 0.87961 | |
| RegenerationR5 | 0.25 | 3.696 | 0.63006 | 0.92252 | |
| RegenerationR6 | 1.956 | 3.696 | 0.00131 | 0.04034 | |
| RegenerationBL | 2.35 | 3.696 | 0.00258 | 0.04259 | |
| RegenerationTP | 2.445 | 3.696 | 0.01600 | 0.21715 |
Genes with expression patterns similar to MligTC455_23899
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23899 | 440 | 9.16 | Mlig455_070517 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 2.530/0.00192 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070517 {REF} {Length: 1907} {Pfam: DDE superfamily endonuclease [PF13358.8, score=31.3]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [RH, Score=88.6, Expect=1e-21]} {RNA1509_53057} {RNA1310_22537.1} {RNA815_10659} | |
| 2. | MligTC455_23898 | 968 | 20.17 | Mlig455_000510, Mlig455_027540 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.553/0.00042 |
5.809 | 0.988 | 0.934 | 0.955 | 0.994 | 0.957 | 0.981 | Mlig455_000510 {REF} {Length: 1286} {TRANSSPLICED} {RNA1509_15796} {RNA1310_22553.2, RNA1509_15796} {RNA1509_15796, RNA815_21620} Mlig455_027540 {REF} {Length: 1287} {TRANSSPLICED} {RNA1509_15796, RNA1509_55654} {RNA1310_22553.2, RNA1509_55654} {RNA1509_55654, RNA815_21620} |
|
| 3. | MligTC455_47349 | 1450 | 30.22 | Mlig455_010530, Mlig455_061804 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.675/0.00004 |
DNMT3B | 2.638 | - | - | 0.806 | 0.876 | - | 0.956 | Mlig455_010530 {REF} {Length: 2248} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=1e-19]} {RNA1509_23149} {RNA1310_10697.1, RNA1509_23149} {RNA1509_23149, RNA815_14886} Mlig455_061804 {REF} {Length: 2249} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.4, Expect=9e-18]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=9e-20]} {RNA1509_23149} {RNA1310_10697.1} {RNA815_14886} |
| 4. | MligTC455_29795 | 1641 | 34.19 | Mlig455_046954 | Neo: - Age: - |
DDX39B | 2.48 | - | 0.709 | - | - | 0.816 | 0.955 | Mlig455_046954 {REF} {Length: 1734} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_16673} {RNA1310_11845} {RNA815_6753} |
| 5. | MligTC455_36145 | 2577 | 53.69 | Mlig455_029420 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.360 Region-enriched R5: 1.284/0.00002 Regeneration-upregulated BL: 1.551 Regeneration-enriched BL: 1.551 |
KPNA2 | 2.399 | - | - | 0.715 | - | 0.724 | 0.960 | Mlig455_029420 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=191.5]; Importin beta binding domain [PF01749.22, score=66.2]; HEAT-like repeat [PF13513.8, score=63.2]; Atypical Arm repeat [PF16186.7, score=62.2]; HEAT repeats [PF13646.8, score=51.2]; HEAT repeat [PF02985.24, score=34.0]} {Human: ENSG00000182481, KPNA2, karyopherin subunit alpha 2, [Score=458, Expect=4e-156]} {Mouse: ENSMUSG00000018362, Kpna2, karyopherin (importin) alpha 2, [Score=451, Expect=2e-153]; ENSMUSG00000066878, Gm10184, predicted pseudogene 10184, [Score=451, Expect=2e-153]; ENSMUSG00000027782, Kpna4, karyopherin (importin) alpha 4, [Score=431, Expect=1e-145]} {Dmel: FBgn0267727, Pen, Pendulin, [RH, Score=397, Expect=2e-132]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=376, Expect=1e-124]} {Smed: dd_Smed_v6_590_0_1, dd_Smed_v6_590_0_1, [Score=419, Expect=2e-141]} {RNA1509_1276} {RNA1310_8995.1, RNA1509_1276} {RNA1509_1276, RNA815_2897} |
| 6. | MligTC455_33488 | 725 | 15.1 | Mlig455_058195 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.276/0.02215 |
RAB21 | 1.8 | - | - | - | 0.825 | 0.975 | - | Mlig455_058195 {REF} {Length: 1536} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=190.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=124.1]; ADP-ribosylation factor family [PF00025.23, score=57.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=20.6]} {Human: ENSG00000080371, RAB21, RAB21, member RAS oncogene family, [RH, Score=268, Expect=6e-91]} {Mouse: ENSMUSG00000020132, Rab21, RAB21, member RAS oncogene family, [RH, Score=264, Expect=1e-89]} {Dmel: FBgn0039966, Rab21, [RH, Score=223, Expect=8e-74]} {Celegans: WBGene00004279, rab-21, RAB family, [RH, Score=204, Expect=1e-66]} {Smed: dd_Smed_v6_1863_0_1, dd_Smed_v6_1863_0_1, [RH, Score=219, Expect=1e-72]} {RNA1509_10017} {RNA1310_7841} {RNA815_6732.1} |
| 7. | MligTC455_50593 | 1562 | 32.54 | Mlig455_016015, Mlig455_059733 | Neo: Neoblast, stringent Age: - |
TK2 | 1.747 | - | 0.767 | - | - | - | 0.980 | Mlig455_016015 {REF} {Length: 1538} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=57.7]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=65.9, Expect=3e-13]} {Mouse: ENSMUSG00000014554, Dguok, deoxyguanosine kinase, [Score=62.0, Expect=4e-12]; ENSMUSG00000029366, Dck, deoxycytidine kinase, [Score=59.7, Expect=3e-11]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=70.9, Expect=1e-15]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849} Mlig455_059733 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=167.9]; AAA domain [PF13238.8, score=31.5]; AAA domain [PF13671.8, score=24.2]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=166, Expect=1e-49]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [Score=162, Expect=1e-48]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=167, Expect=3e-51]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849} |
| 8. | MligTC455_23355 | 380 | 7.91 | Mlig455_047433 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.922/0.03999 Regeneration-upregulated BL: 4.169 Regeneration-enriched BL: 4.169 |
GEMIN5 | 1.694 | - | - | - | 0.741 | - | 0.953 | Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032} |
| 9. | MligTC455_21214 | 548 | 11.42 | Mlig455_026613, Mlig455_042799 | Neo: - Age: - Region-enriched R5: 1.795/0.00741 |
SRR | 1.682 | - | - | - | 0.722 | 0.960 | - | Mlig455_026613 {REF} {Length: 1740} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=172.0]} {Human: ENSG00000167720, SRR, serine racemase, [Score=82.0, Expect=9e-17]} {Mouse: ENSMUSG00000029597, Sds, serine dehydratase, [Score=61.6, Expect=3e-10]} {Celegans: WBGene00010456, K01C8.1, [Score=72.4, Expect=9e-14]} {Smed: dd_Smed_v6_6737_0_1, dd_Smed_v6_6737_0_1, [Score=84.0, Expect=1e-17]} {RNA1509_30139} {RNA1310_17610} {RNA815_6433.1} Mlig455_042799 {REF} {Length: 2307} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=138.2]} {Human: ENSG00000167720, SRR, serine racemase, [Score=76.6, Expect=1e-14]} {Celegans: WBGene00010456, K01C8.1, [Score=65.1, Expect=6e-11]} {Smed: dd_Smed_v6_6737_0_1, dd_Smed_v6_6737_0_1, [Score=79.3, Expect=1e-15]} {RNA1509_30139} {RNA1310_17610} {RNA815_6433.1} |
| 10. | MligTC455_33191 | 4370 | 91.03 | Mlig455_031767 | Neo: - Age: - |
ATP6V0C | 0.977 | - | - | - | - | 0.977 | - | Mlig455_031767 {REF} {Length: 1801} {Pfam: ATP synthase subunit C [PF00137.23, score=130.0]} {Human: ENSG00000185883, ATP6V0C, ATPase H+ transporting V0 subunit c, [RH, Score=226, Expect=6e-77]} {Mouse: ENSMUSG00000024121, Atp6v0c, ATPase, H+ transporting, lysosomal V0 subunit C, [RH, Score=228, Expect=1e-77]} {Dmel: FBgn0262736, Vha16-1, Vacuolar H[+] ATPase 16kD subunit 1, [RH, Score=216, Expect=3e-73]} {Celegans: WBGene00006911, vha-2, V-type proton ATPase 16 kDa proteolipid subunit 2/3, [RH, Score=196, Expect=2e-65]} {Smed: dd_Smed_v6_253_0_1, dd_Smed_v6_253_0_1, [RH, Score=245, Expect=5e-85]} {RNA1509_7541} {RNA1310_23708} {RNA815_12911.1} |
| 11. | MligTC455_44211 | 452 | 9.41 | Mlig455_009049 | Neo: Int S/G2/M Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_009049 {REF} {Length: 1286} {TRANSSPLICED} {Pfam: RFX5 N-terminal domain [PF18326.3, score=25.0]} {RNA1509_27379} {RNA1310_26623, RNA1509_27379} {RNA1509_27379, RNA815_11463} | |
| 12. | MligTC455_25212 | 251 | 5.23 | Mlig455_049236 | Neo: - Age: logFC(26M/2M)=0.733 |
TRIP4 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_049236 {REF} {Length: 2082} {TRANSSPLICED} {Pfam: ASCH domain [PF04266.16, score=64.7]; Putative zinc finger motif, C2HC5-type [PF06221.15, score=44.1]} {Human: ENSG00000103671, TRIP4, thyroid hormone receptor interactor 4, [RH, Score=382, Expect=1e-126]} {Mouse: ENSMUSG00000032386, Trip4, thyroid hormone receptor interactor 4, [RH, Score=382, Expect=2e-126]} {Dmel: FBgn0031115, CG11710, [RH, Score=350, Expect=5e-115]} {Celegans: WBGene00000208, asc-1, ASC-1; Activating Signal Cointegrator homolog, [RH, Score=142, Expect=3e-37]} {Smed: dd_Smed_v6_9211_0_1, dd_Smed_v6_9211_0_1, [RH, Score=332, Expect=2e-109]} {RNA1509_40837} {RNA1310_3130.1} {RNA815_4330} |
| 13. | MligTC455_08871 | 130 | 2.71 | Mlig455_060086 | Neo: - Age: Down-Up-Up |
0.95 | - | - | - | - | - | 0.950 | Mlig455_060086 {REF} {Length: 2203} {TRANSSPLICED} {RNA1509_33391, RNA1509_36079} {RNA1310_36257, RNA1509_33391} {RNA1509_33391, RNA815_41885} | |
| 14. | MligTC455_17194 | 1624 | 33.83 | Mlig455_023010, Mlig455_023110 | Neo: - Age: - Region-enriched R5: 1.116/0.00006 |
CLINT1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_023010 {REF} {Length: 3554} {Pfam: ENTH domain [PF01417.22, score=147.4]; ANTH domain [PF07651.18, score=22.1]} {Human: ENSG00000113282, CLINT1, clathrin interactor 1, [Score=234, Expect=6e-69]} {Mouse: ENSMUSG00000006169, Clint1, clathrin interactor 1, [Score=233, Expect=7e-69]} {Dmel: FBgn0261279, lqfR, liquid facets-Related, [Score=235, Expect=2e-69]} {Celegans: WBGene00004682, rsd-3, [RH, Score=156, Expect=6e-42]} {Smed: dd_Smed_v6_1065_0_1, dd_Smed_v6_1065_0_1, [Score=191, Expect=6e-55]} {RNA1509_35123} {RNA1310_14241.1} {RNA815_5745} Mlig455_023110 {REF} {Length: 3720} {Pfam: ENTH domain [PF01417.22, score=147.4]; ANTH domain [PF07651.18, score=22.1]} {Human: ENSG00000113282, CLINT1, clathrin interactor 1, [Score=232, Expect=3e-68]} {Mouse: ENSMUSG00000006169, Clint1, clathrin interactor 1, [Score=231, Expect=3e-68]} {Dmel: FBgn0261279, lqfR, liquid facets-Related, [Score=234, Expect=2e-69]} {Celegans: WBGene00004682, rsd-3, [RH, Score=156, Expect=5e-42]} {Smed: dd_Smed_v6_1065_0_1, dd_Smed_v6_1065_0_1, [Score=191, Expect=6e-55]} {RNA1509_29128, RNA1509_35123, RNA1509_53560} {RNA1310_14241.1, RNA1509_29128, RNA1509_35123, RNA1509_53560} {RNA1509_29128, RNA1509_35123, RNA1509_53560, RNA815_5745} |