TomoSeq data search

Data search

Results for MligTC455_23905

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23905	225	4.68	Mlig455_050552	Neo: - Age: logFC(26M/2M)=-0.602	LRP2BP	Mlig455_050552 {REF} {Length: 2603} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=68.3]} {Human: ENSG00000109771, LRP2BP, LRP2 binding protein, [Score=275, Expect=9e-91]} {Mouse: ENSMUSG00000031637, Lrp2bp, Lrp2 binding protein, [Score=275, Expect=5e-91]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [Score=50.8, Expect=9e-07]} {Smed: dd_Smed_v6_9780_0_1, dd_Smed_v6_9780_0_1, [Score=263, Expect=2e-86]} {RNA1509_10964} {RNA1310_13796} {RNA815_4576.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_23905

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.085	2.799	0.27615	0.92685
RegionR2	1.323	2.799	0.16847	0.51364
RegionR3	1.231	2.799	0.13977	0.63850
RegionR4	1.801	2.799	0.05404	0.20322
RegionR5	0.307	2.799	0.71112	1.00000
RegionR6	0.145	2.799	0.80106	1.00000
RegionR7	0.581	2.799	0.59092	1.00000
RegionR8	-0.301	2.799	0.93036	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.2	2.799	0.99995	1.00000
RegenerationR2	0.477	2.799	0.36321	0.79065
RegenerationR3	-0.213	2.799	0.73713	0.95967
RegenerationR4	-0.03	2.799	0.95978	1.00000
RegenerationR5	1.177	2.799	0.05585	0.37866
RegenerationR6	0.74	2.799	0.31678	0.66424
RegenerationBL	0.717	2.799	0.43208	0.79997
RegenerationTP	1.032	2.799	0.24471	0.69110

Genes with expression patterns similar to MligTC455_23905

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23905	225	4.68	Mlig455_050552	Neo: - Age: logFC(26M/2M)=-0.602	LRP2BP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050552 {REF} {Length: 2603} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=68.3]} {Human: ENSG00000109771, LRP2BP, LRP2 binding protein, [Score=275, Expect=9e-91]} {Mouse: ENSMUSG00000031637, Lrp2bp, Lrp2 binding protein, [Score=275, Expect=5e-91]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [Score=50.8, Expect=9e-07]} {Smed: dd_Smed_v6_9780_0_1, dd_Smed_v6_9780_0_1, [Score=263, Expect=2e-86]} {RNA1509_10964} {RNA1310_13796} {RNA815_4576.1}
2.	MligTC455_23573	100	2.09	Mlig455_059574	Neo: - Age: -	INTS12	0.973	-	-	-	-	0.973	-	Mlig455_059574 {REF} {Length: 1786} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=29.2]} {Human: ENSG00000138785, INTS12, integrator complex subunit 12, [RH, Score=78.6, Expect=6e-16]} {Mouse: ENSMUSG00000028016, Ints12, integrator complex subunit 12, [RH, Score=77.8, Expect=7e-16]} {RNA1509_29047, RNA1509_58658} {RNA1310_35849, RNA1509_58658} {RNA1509_58658, RNA815_29833}
3.	MligTC455_38247	634	13.22	Mlig455_025209, Mlig455_025650	Neo: Irradiation Age: logFC(26M/2M)=-0.195	SLC6A5	0.952	-	-	-	-	0.952	-	Mlig455_025209 {REF} {Length: 2439} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=613.8]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=520, Expect=2e-173]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=522, Expect=2e-174]} {Dmel: FBgn0034911, CG5549, [Score=466, Expect=6e-149]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=402, Expect=1e-130]} {Smed: dd_Smed_v6_6616_0_1, dd_Smed_v6_6616_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_1266, RNA1509_19993, RNA1509_8989} {RNA1310_2851, RNA1509_19993, RNA1509_8989} {RNA1509_19993, RNA1509_8989, RNA815_990} Mlig455_025650 {REF} {Length: 4261} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=613.8]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=520, Expect=2e-173]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=522, Expect=2e-174]} {Dmel: FBgn0034911, CG5549, [Score=466, Expect=6e-149]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=402, Expect=1e-130]} {Smed: dd_Smed_v6_6616_0_1, dd_Smed_v6_6616_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_1266, RNA1509_59101} {RNA1310_2851, RNA1509_1266, RNA1509_59101} {RNA1509_1266, RNA1509_59101, RNA815_990}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23905

225

4.68

Mlig455_050552

Neo: -

Age: logFC(26M/2M)=-0.602

LRP2BP

1.000

MligTC455_23573

100

2.09

Mlig455_059574

Neo: -

Age: -

INTS12

0.973

Mlig455_059574 {REF} {Length: 1786} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=29.2]} {Human: ENSG00000138785, INTS12, integrator complex subunit 12, [RH, Score=78.6, Expect=6e-16]} {Mouse: ENSMUSG00000028016, Ints12, integrator complex subunit 12, [RH, Score=77.8, Expect=7e-16]} {RNA1509_29047, RNA1509_58658} {RNA1310_35849, RNA1509_58658} {RNA1509_58658, RNA815_29833}

MligTC455_38247

634

13.22

Mlig455_025209, Mlig455_025650

Neo: Irradiation

Age: logFC(26M/2M)=-0.195

SLC6A5

0.952

Mlig455_025209 {REF} {Length: 2439} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=613.8]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=520, Expect=2e-173]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=522, Expect=2e-174]} {Dmel: FBgn0034911, CG5549, [Score=466, Expect=6e-149]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=402, Expect=1e-130]} {Smed: dd_Smed_v6_6616_0_1, dd_Smed_v6_6616_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_1266, RNA1509_19993, RNA1509_8989} {RNA1310_2851, RNA1509_19993, RNA1509_8989} {RNA1509_19993, RNA1509_8989, RNA815_990}

Mlig455_025650 {REF} {Length: 4261} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=613.8]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=520, Expect=2e-173]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=522, Expect=2e-174]} {Dmel: FBgn0034911, CG5549, [Score=466, Expect=6e-149]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=402, Expect=1e-130]} {Smed: dd_Smed_v6_6616_0_1, dd_Smed_v6_6616_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_1266, RNA1509_59101} {RNA1310_2851, RNA1509_1266, RNA1509_59101} {RNA1509_1266, RNA1509_59101, RNA815_990}