TomoSeq data search

Data search

Results for MligTC455_23965

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23965

4427

92.22

Mlig455_049268

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.277

RPL14

Mlig455_049268 {REF} {Length: 687} {TRANSSPLICED} {Pfam: Ribosomal protein L14 [PF01929.19, score=93.4]} {Human: ENSG00000188846, RPL14, ribosomal protein L14, [RH, Score=141, Expect=2e-42]} {Mouse: ENSMUSG00000025794, Rpl14, ribosomal protein L14, [RH, Score=138, Expect=2e-41]} {Dmel: FBgn0017579, RpL14, Ribosomal protein L14, [RH, Score=122, Expect=6e-36]} {Celegans: WBGene00004426, rpl-14, Ribosomal Protein, Large subunit, [RH, Score=126, Expect=4e-38]} {Smed: dd_Smed_v6_167_0_1, dd_Smed_v6_167_0_1, [RH, Score=140, Expect=1e-43]} {RNA1509_3193} {RNA1310_51337.2, RNA1509_3193} {RNA1509_3193, RNA815_26013}

Cumulative graph for MligTC455_23965

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.7	6.683	0.01940	0.38703
RegionR2	0.412	6.683	0.38957	0.78433
RegionR3	0.525	6.683	0.20369	0.74371
RegionR4	-0.87	6.683	0.06877	0.23926
RegionR5	0.372	6.683	0.35389	0.70419
RegionR6	0.242	6.683	0.56024	1.00000
RegionR7	0.643	6.683	0.09992	0.60430
RegionR8	0.376	6.683	0.38858	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.354	6.683	0.70525	1.00000
RegenerationR2	-1.908	6.683	0.00050	0.03029
RegenerationR3	-1.601	6.683	0.00343	0.10432
RegenerationR4	-1.246	6.683	0.02734	0.26549
RegenerationR5	-1.723	6.683	0.00194	0.07586
RegenerationR6	-1.773	6.683	0.00176	0.04723
RegenerationBL	-1.028	6.683	0.04333	0.23748
RegenerationTP	-1.772	6.683	0.00117	0.05269

Genes with expression patterns similar to MligTC455_23965

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23965	4427	92.22	Mlig455_049268	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.277	RPL14	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049268 {REF} {Length: 687} {TRANSSPLICED} {Pfam: Ribosomal protein L14 [PF01929.19, score=93.4]} {Human: ENSG00000188846, RPL14, ribosomal protein L14, [RH, Score=141, Expect=2e-42]} {Mouse: ENSMUSG00000025794, Rpl14, ribosomal protein L14, [RH, Score=138, Expect=2e-41]} {Dmel: FBgn0017579, RpL14, Ribosomal protein L14, [RH, Score=122, Expect=6e-36]} {Celegans: WBGene00004426, rpl-14, Ribosomal Protein, Large subunit, [RH, Score=126, Expect=4e-38]} {Smed: dd_Smed_v6_167_0_1, dd_Smed_v6_167_0_1, [RH, Score=140, Expect=1e-43]} {RNA1509_3193} {RNA1310_51337.2, RNA1509_3193} {RNA1509_3193, RNA815_26013}
2.	MligTC455_28086	316	6.58	Mlig455_024878	Neo: - Age: Down-Up-Up Region-enriched R7: 5.514/0.00000 Region-enriched R8: 4.070/0.00322 Region-enriched R6: 3.178/0.00029	MPEG1	0.966	-	-	-	-	0.966	-	Mlig455_024878 {REF} {Length: 3380} {Pfam: MAC/Perforin domain [PF01823.21, score=70.8]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [Score=326, Expect=1e-100]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [Score=320, Expect=2e-98]; ENSMUSG00000040065, Pfpl, pore forming protein-like, [Score=311, Expect=3e-95]} {Smed: dd_Smed_v6_10990_0_1, dd_Smed_v6_10990_0_1, [Score=306, Expect=4e-94]} {RNA1509_22751} {RNA1310_8390.1} {RNA815_3477}
3.	MligTC455_47303	180	3.75	Mlig455_022918	Neo: - Age: Down-Up-Down	ARHGAP24	0.966	-	-	-	-	0.966	-	Mlig455_022918 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=35.9]} {Human: ENSG00000138639, ARHGAP24, Rho GTPase activating protein 24, [Score=72.4, Expect=9e-13]; ENSG00000128805, ARHGAP22, Rho GTPase activating protein 22, [Score=72.0, Expect=1e-12]; ENSG00000163219, ARHGAP25, Rho GTPase activating protein 25, [Score=70.9, Expect=3e-12]} {Mouse: ENSMUSG00000057315, Arhgap24, Rho GTPase activating protein 24, [Score=75.1, Expect=1e-13]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=70.1, Expect=1e-12]} {RNA1509_23863} {RNA1310_16225.1} {RNA815_11840}
4.	MligTC455_01437	12	0.25	Mlig455_002327	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_002327 {REF} {Length: 336} {NoTransDecoderORF} {RNA1509_47133} {RNA1310_49616.2} {RNA815_60895}
5.	MligTC455_38181	22	0.45	Mlig455_020407	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_020407 {REF} {Length: 1478} {Pfam: Type II secretion system (T2SS), protein F [PF00482.25, score=19.0]} {RNA1310_102366} {RNA815_27771}
6.	MligTC455_42729	18	0.38	Mlig455_035431	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_035431 {REF} {Length: 599} {NoTransDecoderORF} {RNA1509_33465} {RNA1310_38919} {RNA815_32249}

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