TomoSeq data search

Data search

Results for MligTC455_23966

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23966	18816	392.00	Mlig455_050614, Mlig455_060959	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.393	RPL14	Mlig455_050614 {REF} {Length: 682} {TRANSSPLICED} {Pfam: Ribosomal protein L14 [PF01929.19, score=94.0]} {Human: ENSG00000188846, RPL14, ribosomal protein L14, [RH, Score=142, Expect=9e-43]} {Mouse: ENSMUSG00000025794, Rpl14, ribosomal protein L14, [RH, Score=139, Expect=7e-42]} {Dmel: FBgn0017579, RpL14, Ribosomal protein L14, [RH, Score=121, Expect=1e-35]} {Celegans: WBGene00004426, rpl-14, Ribosomal Protein, Large subunit, [RH, Score=126, Expect=7e-38]} {Smed: dd_Smed_v6_167_0_1, dd_Smed_v6_167_0_1, [RH, Score=140, Expect=2e-43]} {RNA1509_3383, RNA1509_354} {RNA1310_51337.1, RNA1509_3383, RNA1509_354} {RNA1509_3383, RNA1509_354, RNA815_26013} Mlig455_060959 {REF} {Length: 651} {NoTransDecoderORF} {RNA1509_25692} {RNA1310_86519.1} {RNA815_2236}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23966

18816

392.00

Mlig455_050614, Mlig455_060959

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.393

RPL14

Mlig455_050614 {REF} {Length: 682} {TRANSSPLICED} {Pfam: Ribosomal protein L14 [PF01929.19, score=94.0]} {Human: ENSG00000188846, RPL14, ribosomal protein L14, [RH, Score=142, Expect=9e-43]} {Mouse: ENSMUSG00000025794, Rpl14, ribosomal protein L14, [RH, Score=139, Expect=7e-42]} {Dmel: FBgn0017579, RpL14, Ribosomal protein L14, [RH, Score=121, Expect=1e-35]} {Celegans: WBGene00004426, rpl-14, Ribosomal Protein, Large subunit, [RH, Score=126, Expect=7e-38]} {Smed: dd_Smed_v6_167_0_1, dd_Smed_v6_167_0_1, [RH, Score=140, Expect=2e-43]} {RNA1509_3383, RNA1509_354} {RNA1310_51337.1, RNA1509_3383, RNA1509_354} {RNA1509_3383, RNA1509_354, RNA815_26013}

Mlig455_060959 {REF} {Length: 651} {NoTransDecoderORF} {RNA1509_25692} {RNA1310_86519.1} {RNA815_2236}

Cumulative graph for MligTC455_23966

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.695	8.67	0.04272	0.50033
RegionR2	-0.733	8.67	0.00564	0.06945
RegionR3	0.195	8.67	0.38137	0.91290
RegionR4	0.809	8.67	0.00082	0.00890
RegionR5	0.806	8.67	0.00011	0.00183
RegionR6	0.194	8.67	0.38431	0.96220
RegionR7	0.187	8.67	0.39621	1.00000
RegionR8	-0.763	8.67	0.00383	0.10843

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.752	8.67	0.08071	0.77647
RegenerationR2	-0.064	8.67	0.82255	0.99576
RegenerationR3	-0.097	8.67	0.73641	0.95945
RegenerationR4	-0.119	8.67	0.68727	0.94809
RegenerationR5	-0.432	8.67	0.13062	0.53647
RegenerationR6	-0.048	8.67	0.86807	1.00000
RegenerationBL	0.023	8.67	0.92671	1.00000
RegenerationTP	0.023	8.67	0.93104	1.00000

Genes with expression patterns similar to MligTC455_23966

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23966	18816	392	Mlig455_050614, Mlig455_060959	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.393	RPL14	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050614 {REF} {Length: 682} {TRANSSPLICED} {Pfam: Ribosomal protein L14 [PF01929.19, score=94.0]} {Human: ENSG00000188846, RPL14, ribosomal protein L14, [RH, Score=142, Expect=9e-43]} {Mouse: ENSMUSG00000025794, Rpl14, ribosomal protein L14, [RH, Score=139, Expect=7e-42]} {Dmel: FBgn0017579, RpL14, Ribosomal protein L14, [RH, Score=121, Expect=1e-35]} {Celegans: WBGene00004426, rpl-14, Ribosomal Protein, Large subunit, [RH, Score=126, Expect=7e-38]} {Smed: dd_Smed_v6_167_0_1, dd_Smed_v6_167_0_1, [RH, Score=140, Expect=2e-43]} {RNA1509_3383, RNA1509_354} {RNA1310_51337.1, RNA1509_3383, RNA1509_354} {RNA1509_3383, RNA1509_354, RNA815_26013} Mlig455_060959 {REF} {Length: 651} {NoTransDecoderORF} {RNA1509_25692} {RNA1310_86519.1} {RNA815_2236}
2.	MligTC455_24189	24055	501.14	Mlig455_009957	Neo: - Age: logFC(26M/2M)=1.123	RPL8	1.653	0.700	-	-	-	-	0.953	Mlig455_009957 {REF} {Length: 957} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=155.5]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=59.8]} {Human: ENSG00000161016, RPL8, ribosomal protein L8, [RH, Score=415, Expect=5e-148]} {Mouse: ENSMUSG00000003970, Rpl8, ribosomal protein L8, [RH, Score=415, Expect=4e-148]} {Dmel: FBgn0261602, RpL8, Ribosomal protein L8, [RH, Score=411, Expect=7e-147]} {Celegans: WBGene00004413, rpl-2, 60S ribosomal protein L8, [RH, Score=393, Expect=6e-140]} {Smed: dd_Smed_v6_108_0_1, dd_Smed_v6_108_0_1, [RH, Score=400, Expect=5e-143]} {RNA1509_173, RNA1509_4276} {RNA1310_38797, RNA1509_4276} {RNA1509_4276, RNA815_9295.1}
3.	MligTC455_24188	24101	502.11	Mlig455_009870	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.387	RPL8	1.651	0.700	-	-	-	-	0.951	Mlig455_009870 {REF} {Length: 959} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=155.5]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=59.8]} {Human: ENSG00000161016, RPL8, ribosomal protein L8, [RH, Score=415, Expect=5e-148]} {Mouse: ENSMUSG00000003970, Rpl8, ribosomal protein L8, [RH, Score=415, Expect=4e-148]} {Dmel: FBgn0261602, RpL8, Ribosomal protein L8, [RH, Score=411, Expect=7e-147]} {Celegans: WBGene00004413, rpl-2, 60S ribosomal protein L8, [RH, Score=393, Expect=6e-140]} {Smed: dd_Smed_v6_108_0_1, dd_Smed_v6_108_0_1, [RH, Score=400, Expect=5e-143]} {RNA1509_10090, RNA1509_173} {RNA1310_38797, RNA1509_10090, RNA1509_173} {RNA1509_10090, RNA1509_173, RNA815_9295.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23966

18816

392

Mlig455_050614, Mlig455_060959

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.393

RPL14

1.000

Mlig455_060959 {REF} {Length: 651} {NoTransDecoderORF} {RNA1509_25692} {RNA1310_86519.1} {RNA815_2236}

MligTC455_24189

24055

501.14

Mlig455_009957

Neo: -

Age: logFC(26M/2M)=1.123

RPL8

1.653

0.700

0.953

Mlig455_009957 {REF} {Length: 957} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=155.5]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=59.8]} {Human: ENSG00000161016, RPL8, ribosomal protein L8, [RH, Score=415, Expect=5e-148]} {Mouse: ENSMUSG00000003970, Rpl8, ribosomal protein L8, [RH, Score=415, Expect=4e-148]} {Dmel: FBgn0261602, RpL8, Ribosomal protein L8, [RH, Score=411, Expect=7e-147]} {Celegans: WBGene00004413, rpl-2, 60S ribosomal protein L8, [RH, Score=393, Expect=6e-140]} {Smed: dd_Smed_v6_108_0_1, dd_Smed_v6_108_0_1, [RH, Score=400, Expect=5e-143]} {RNA1509_173, RNA1509_4276} {RNA1310_38797, RNA1509_4276} {RNA1509_4276, RNA815_9295.1}

MligTC455_24188

24101

502.11

Mlig455_009870

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.387

RPL8

1.651

0.700

0.951

Mlig455_009870 {REF} {Length: 959} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=155.5]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=59.8]} {Human: ENSG00000161016, RPL8, ribosomal protein L8, [RH, Score=415, Expect=5e-148]} {Mouse: ENSMUSG00000003970, Rpl8, ribosomal protein L8, [RH, Score=415, Expect=4e-148]} {Dmel: FBgn0261602, RpL8, Ribosomal protein L8, [RH, Score=411, Expect=7e-147]} {Celegans: WBGene00004413, rpl-2, 60S ribosomal protein L8, [RH, Score=393, Expect=6e-140]} {Smed: dd_Smed_v6_108_0_1, dd_Smed_v6_108_0_1, [RH, Score=400, Expect=5e-143]} {RNA1509_10090, RNA1509_173} {RNA1310_38797, RNA1509_10090, RNA1509_173} {RNA1509_10090, RNA1509_173, RNA815_9295.1}