TomoSeq data search

Data search

Results for MligTC455_24012

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24012	735	15.31	Mlig455_024389, Mlig455_024502	Neo: - Age: Up-Up-Down	SINHCAF	Mlig455_024389 {REF} {Length: 4000} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=69.3]} {Human: ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]; ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Dmel: FBgn0266000, CG44774, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=83.2, Expect=3e-18]} {RNA1509_16695, RNA1509_26779} {RNA1310_10489, RNA1509_16695, RNA1509_26779} {RNA1509_16695, RNA1509_26779, RNA815_5165} Mlig455_024502 {REF} {Length: 4041} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=69.3]} {Human: ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]; ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=65.1, Expect=2e-12]} {Dmel: FBgn0266000, CG44774, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=84.7, Expect=9e-19]} {RNA1509_16695} {RNA1310_10489} {RNA815_5165}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24012

735

15.31

Mlig455_024389, Mlig455_024502

Neo: -

Age: Up-Up-Down

SINHCAF

Mlig455_024389 {REF} {Length: 4000} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=69.3]} {Human: ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]; ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Dmel: FBgn0266000, CG44774, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=83.2, Expect=3e-18]} {RNA1509_16695, RNA1509_26779} {RNA1310_10489, RNA1509_16695, RNA1509_26779} {RNA1509_16695, RNA1509_26779, RNA815_5165}

Mlig455_024502 {REF} {Length: 4041} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=69.3]} {Human: ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]; ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=65.1, Expect=2e-12]} {Dmel: FBgn0266000, CG44774, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=84.7, Expect=9e-19]} {RNA1509_16695} {RNA1310_10489} {RNA815_5165}

Cumulative graph for MligTC455_24012

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.66	4.251	0.01011	0.29332
RegionR2	1.416	4.251	0.05046	0.26796
RegionR3	1.24	4.251	0.05863	0.42671
RegionR4	0.554	4.251	0.52330	0.84776
RegionR5	1.049	4.251	0.12004	0.34657
RegionR6	0.721	4.251	0.37690	0.95729
RegionR7	0.61	4.251	0.50902	1.00000
RegionR8	2.068	4.251	0.00410	0.11209

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.29	4.251	0.99997	1.00000
RegenerationR2	0.209	4.251	0.57526	0.90463
RegenerationR3	-0.084	4.251	0.84080	0.99504
RegenerationR4	-0.272	4.251	0.54280	0.88962
RegenerationR5	0.156	4.251	0.68990	0.94785
RegenerationR6	0.191	4.251	0.66329	0.90515
RegenerationBL	-0.556	4.251	0.26757	0.62671
RegenerationTP	-0.195	4.251	0.70304	1.00000

Genes with expression patterns similar to MligTC455_24012

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24012	735	15.31	Mlig455_024389, Mlig455_024502	Neo: - Age: Up-Up-Down	SINHCAF	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024389 {REF} {Length: 4000} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=69.3]} {Human: ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]; ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Dmel: FBgn0266000, CG44774, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=83.2, Expect=3e-18]} {RNA1509_16695, RNA1509_26779} {RNA1310_10489, RNA1509_16695, RNA1509_26779} {RNA1509_16695, RNA1509_26779, RNA815_5165} Mlig455_024502 {REF} {Length: 4041} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=69.3]} {Human: ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]; ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=2e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=65.1, Expect=2e-12]} {Dmel: FBgn0266000, CG44774, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=84.7, Expect=9e-19]} {RNA1509_16695} {RNA1310_10489} {RNA815_5165}
2.	MligTC455_41940	3403	70.89	Mlig455_017574	Neo: - Age: logFC(26M/2M)=-0.297		1.687	0.727	-	-	-	0.960	-	Mlig455_017574 {REF} {Length: 1354} {RNA1509_1802} {RNA1310_28446.1} {RNA815_13459}
3.	MligTC455_41942	3252	67.74	Mlig455_030861	Neo: - Age: -	MAD1L1	1.671	0.704	-	-	-	0.967	-	Mlig455_030861 {REF} {Length: 3718} {TRANSSPLICED} {Pfam: Mitotic checkpoint protein [PF05557.15, score=130.8]} {Human: ENSG00000002822, MAD1L1, mitotic arrest deficient 1 like 1, [RH, Score=92.8, Expect=1e-18]} {Dmel: FBgn0026326, Mad1, Mitotic arrest-deficient 1, [RH, Score=65.5, Expect=2e-10]} {RNA1509_21631} {RNA1310_5312} {RNA815_1674}
4.	MligTC455_28986	256	5.33	Mlig455_059441	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.429		0.968	-	-	-	-	0.968	-	Mlig455_059441 {REF} {Length: 1071} {TRANSSPLICED} {RNA1509_45862} {RNA1310_33199, RNA1509_45862} {RNA1509_45862, RNA815_15931}
5.	MligTC455_41694	404	8.41	Mlig455_026434, Mlig455_026464	Neo: - Age: -	SSUH2	0.956	-	-	-	-	0.956	-	Mlig455_026434 {REF} {Length: 1709} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=210, Expect=4e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=177, Expect=5e-52]} {RNA1509_35286} {RNA1310_19837, RNA1509_35286} {RNA1509_35286, RNA815_11262} Mlig455_026464 {REF} {Length: 1584} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=210, Expect=7e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=178, Expect=4e-52]} {RNA1509_35286} {RNA1310_19837} {RNA815_11262}
6.	MligTC455_10416	765	15.93	Mlig455_008958	Neo: - Age: - Region-enriched R8: 1.474/0.04842		0.955	-	-	-	-	0.955	-	Mlig455_008958 {REF} {Length: 515} {NoTransDecoderORF} {RNA1310_120997} {RNA815_53530}
7.	MligTC455_47839	243	5.06	Mlig455_019928	Neo: - Age: Down-Down-Up		0.955	-	-	-	-	0.955	-	Mlig455_019928 {REF} {Length: 1993} {TRANSSPLICED} {Smed: dd_Smed_v6_9778_0_4, dd_Smed_v6_9778_0_4, [RH, Score=254, Expect=3e-83]} {RNA1509_39726} {RNA1310_16157} {RNA815_7435.1}
8.	MligTC455_28239	224	4.67	Mlig455_019487, Mlig455_022546, Mlig455_025484, Mlig455_035873, Mlig455_060690, Mlig455_066751	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	0.950	-	Mlig455_019487 {REF} {Length: 943} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121} Mlig455_022546 {REF} {Length: 1186} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_33924} Mlig455_025484 {REF} {Length: 3729} {NoTransDecoderORF} {RNA1509_20409, RNA1509_57922} {RNA1310_17062, RNA1509_20409, RNA1509_57922} {RNA1509_20409, RNA1509_57922, RNA815_17069.1} Mlig455_035873 {REF} {Length: 1678} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1, RNA1509_25886} {RNA1509_25886, RNA815_17069.1} Mlig455_060690 {REF} {Length: 2757} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_33924} Mlig455_066751 {REF} {Length: 361} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121}