Data search
Results for MligTC455_24043
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24043 | 27 | 0.56 | Mlig455_039739 | Neo: - Age: Up-Up-Down |
TRIM56 | Mlig455_039739 {REF} {Length: 3371} {Pfam: B-box zinc finger [PF00643.26, score=45.5]; RING-type zinc-finger [PF13445.8, score=33.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.7]; Ring finger domain [PF13639.8, score=23.0]; zinc-RING finger domain [PF14634.8, score=22.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.0]; Protein of unknown function (DUF3583) [PF12126.10, score=19.9]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=126, Expect=1e-29]} {Mouse: ENSMUSG00000043279, Trim56, tripartite motif-containing 56, [RH, Score=120, Expect=3e-28]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=106, Expect=2e-23]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=410, Expect=4e-137]} {RNA1509_34137} {RNA1310_8779.2} {RNA815_3714} |
Cumulative graph for MligTC455_24043
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.21 | 0.726 | 0.99986 | 1.00000 | |
| RegionR2 | 2.177 | 0.726 | 0.20729 | 0.57017 | |
| RegionR3 | -1.981 | 0.726 | 0.99971 | 1.00000 | |
| RegionR4 | 0.999 | 0.726 | 0.41567 | 0.74322 | |
| RegionR5 | -0.875 | 0.726 | 0.91421 | 1.00000 | |
| RegionR6 | 0.994 | 0.726 | 0.63976 | 1.00000 | |
| RegionR7 | -1.175 | 0.726 | 0.99973 | 1.00000 | |
| RegionR8 | 0.071 | 0.726 | 0.99970 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.658 | 0.726 | 0.99994 | 1.00000 | |
| RegenerationR2 | -3.307 | 0.726 | 0.00391 | 0.09621 | |
| RegenerationR3 | -0.74 | 0.726 | 0.86295 | 1.00000 | |
| RegenerationR4 | -1.872 | 0.726 | 0.05224 | 0.36691 | |
| RegenerationR5 | -1.647 | 0.726 | 0.13520 | 0.54411 | |
| RegenerationR6 | -1.958 | 0.726 | 0.06888 | 0.32894 | |
| RegenerationBL | -3.697 | 0.726 | 0.99956 | 1.00000 | |
| RegenerationTP | 0.748 | 0.726 | 0.72685 | 1.00000 |
Genes with expression patterns similar to MligTC455_24043
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24043 | 27 | 0.56 | Mlig455_039739 | Neo: - Age: Up-Up-Down |
TRIM56 | 2 | - | - | 1.000 | - | 1.000 | - | Mlig455_039739 {REF} {Length: 3371} {Pfam: B-box zinc finger [PF00643.26, score=45.5]; RING-type zinc-finger [PF13445.8, score=33.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.7]; Ring finger domain [PF13639.8, score=23.0]; zinc-RING finger domain [PF14634.8, score=22.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.0]; Protein of unknown function (DUF3583) [PF12126.10, score=19.9]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=126, Expect=1e-29]} {Mouse: ENSMUSG00000043279, Trim56, tripartite motif-containing 56, [RH, Score=120, Expect=3e-28]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=106, Expect=2e-23]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=410, Expect=4e-137]} {RNA1509_34137} {RNA1310_8779.2} {RNA815_3714} |
| 2. | MligTC455_03106 | 51 | 1.06 | Mlig455_009919 | Neo: - Age: - |
0.994 | - | - | 0.994 | - | - | - | Mlig455_009919 {REF} {Length: 513} {NoTransDecoderORF} | |
| 3. | MligTC455_19039 | 44 | 0.92 | Mlig455_022002 | Neo: - Age: - |
0.983 | - | - | 0.983 | - | - | - | Mlig455_022002 {REF} {Length: 675} {NoTransDecoderORF} {RNA1310_112918} | |
| 4. | MligTC455_19998 | 63 | 1.32 | Mlig455_029488, Mlig455_029508, Mlig455_065332 | Neo: - Age: - Region-enriched R2: 3.056/0.03584 |
ANK2 | 0.978 | - | - | 0.978 | - | - | - | Mlig455_029488 {REF} {Length: 314} {RNA1310_95610} {RNA815_52807} Mlig455_029508 {REF} {Length: 260} {RNA1310_95610} {RNA815_52807} Mlig455_065332 {REF} {Length: 3133} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=191.5]; Ankyrin repeats (many copies) [PF13637.8, score=105.6]; Ankyrin repeats (many copies) [PF13857.8, score=104.9]; Ankyrin repeat [PF13606.8, score=99.4]; Ankyrin repeat [PF00023.32, score=95.2]; Mab-21 protein [PF03281.16, score=31.4]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=133, Expect=5e-31]; ENSG00000170209, ANKK1, ankyrin repeat and kinase domain containing 1, [Score=132, Expect=5e-31]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=131, Expect=3e-30]; ENSG00000151150, ANK3, ankyrin 3, [Score=127, Expect=4e-29]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=133, Expect=5e-31]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=129, Expect=1e-29]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=119, Expect=6e-27]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=111, Expect=1e-24]} {Smed: dd_Smed_v6_11663_0_3, dd_Smed_v6_11663_0_3, [Score=123, Expect=6e-31]} {RNA1509_55434} {RNA1310_8857.1, RNA1509_55434} {RNA1509_55434, RNA815_21573} |
| 5. | MligTC455_38975 | 29 | 0.61 | Mlig455_032389 | Neo: - Age: - |
MYO3A | 0.972 | - | - | 0.972 | - | - | - | Mlig455_032389 {REF} {Length: 6082} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=599.6]; Protein kinase domain [PF00069.27, score=167.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=139.1]; Aminotransferase class-V [PF00266.21, score=41.6]; DegT/DnrJ/EryC1/StrS aminotransferase family [PF01041.19, score=20.4]; IQ calmodulin-binding motif [PF00612.29, score=20.3]} {Human: ENSG00000095777, MYO3A, myosin IIIA, [RH, Score=862, Expect=0.0]; ENSG00000071909, MYO3B, myosin IIIB, [RH, Score=851, Expect=0.0]} {Mouse: ENSMUSG00000025716, Myo3a, myosin IIIA, [RH, Score=851, Expect=0.0]; ENSMUSG00000042064, Myo3b, myosin IIIB, [RH, Score=843, Expect=0.0]} {Dmel: FBgn0002938, ninaC, neither inactivation nor afterpotential C, [RH, Score=501, Expect=5e-149]} {Celegans: WBGene00015802, kynu-1, Kynureninase, [RH, Score=457, Expect=1e-144]} {Smed: dd_Smed_v6_4299_0_1, dd_Smed_v6_4299_0_1, [RH, Score=444, Expect=2e-140]} {RNA1509_12030, RNA1509_46160} {RNA1310_1045, RNA1509_46160} {RNA1509_46160, RNA815_499.1} |
| 6. | MligTC455_30254 | 173 | 3.6 | Mlig455_009660, Mlig455_036941 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.773 Region-enriched R2: 3.514/0.04040 |
0.958 | - | - | 0.958 | - | - | - | Mlig455_009660 {REF} {Length: 800} {NoTransDecoderORF} {RNA1509_49715} {RNA1310_24655} {RNA815_31399} Mlig455_036941 {REF} {Length: 1614} {RNA1509_49715} {RNA1310_24655, RNA1509_49715} {RNA1509_49715, RNA815_31399} |
|
| 7. | MligTC455_53460 | 29 | 0.61 | Mlig455_007069 | Neo: - Age: Up-Down-Down |
PLCE1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_007069 {REF} {Length: 11082} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=203.6]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=105.3]; RasGEF domain [PF00617.21, score=49.4]; FERM central domain [PF00373.20, score=30.2]; Phosphoinositide-specific phospholipase C, efhand-like [PF09279.13, score=27.0]; C2 domain [PF00168.32, score=24.1]; Ankyrin repeats (many copies) [PF13637.8, score=20.6]} {Human: ENSG00000138193, PLCE1, phospholipase C epsilon 1, [Score=504, Expect=1e-143]} {Mouse: ENSMUSG00000024998, Plce1, phospholipase C, epsilon 1, [Score=497, Expect=1e-141]} {Dmel: FBgn0004611, Plc21C, Phospholipase C at 21C, [Score=162, Expect=3e-39]} {Celegans: WBGene00001177, egl-8, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8, [Score=260, Expect=1e-69]} {Smed: dd_Smed_v6_9716_1_1, dd_Smed_v6_9716_1_1, [Score=561, Expect=4e-162]} {RNA1310_38856} {RNA815_52816} |
| 8. | MligTC455_22914 | 118 | 2.47 | Mlig455_017733 | Neo: - Age: Up-Down-Down |
POMGNT1 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_017733 {REF} {Length: 2711} {Pfam: GNT-I family [PF03071.17, score=57.5]; Interleukin-like EMT inducer [PF15711.7, score=19.3]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=194, Expect=4e-53]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=194, Expect=1e-53]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=70.1, Expect=2e-12]} {Celegans: WBGene00001638, gly-13, Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, [Score=53.5, Expect=3e-07]} {Smed: dd_Smed_v6_17617_0_1, dd_Smed_v6_17617_0_1, [RH, Score=185, Expect=7e-51]} {RNA1310_17377} {RNA815_13131} |
| 9. | MligTC455_52359 | 102 | 2.13 | Mlig455_018934 | Neo: - Age: Up-Down-Up |
NOP58 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_018934 {REF} {Length: 2012} {TRANSSPLICED} {Pfam: snoRNA binding domain, fibrillarin [PF01798.20, score=262.6]; NOP5NT (NUC127) domain [PF08156.15, score=55.1]} {Human: ENSG00000055044, NOP58, NOP58 ribonucleoprotein, [RH, Score=473, Expect=2e-162]} {Mouse: ENSMUSG00000026020, Nop58, NOP58 ribonucleoprotein, [RH, Score=488, Expect=2e-168]} {Dmel: FBgn0026196, nop5, [RH, Score=469, Expect=2e-161]} {Celegans: WBGene00020915, nol-5, NucleOLar protein, [RH, Score=448, Expect=1e-153]} {Smed: dd_Smed_v6_1982_0_1, dd_Smed_v6_1982_0_1, [RH, Score=416, Expect=9e-142]} {RNA1509_12712} {RNA1310_14695.1} {RNA815_10853} |
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