Data search
Results for MligTC455_24045
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24045 | 755 | 15.73 | Mlig455_035819, Mlig455_058377 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.434 Region-enriched R5: 1.367/0.01680 |
RFC4 | Mlig455_035819 {REF} {Length: 1266} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=53.9]; DNA polymerase III, delta subunit [PF13177.8, score=46.9]; Replication factor C C-terminal domain [PF08542.13, score=44.2]; AAA C-terminal domain [PF16193.7, score=23.6]; AAA ATPase domain [PF13191.8, score=21.6]; AAA domain [PF13401.8, score=21.2]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.7]} {Human: ENSG00000163918, RFC4, replication factor C subunit 4, [RH, Score=356, Expect=6e-122]} {Mouse: ENSMUSG00000022881, Rfc4, replication factor C (activator 1) 4, [RH, Score=347, Expect=3e-118]} {Dmel: FBgn0030871, CG8142, [RH, Score=313, Expect=3e-105]} {Celegans: WBGene00004340, rfc-4, Replication factor C subunit 4, [RH, Score=229, Expect=6e-73]} {Smed: dd_Smed_v6_6733_0_1, dd_Smed_v6_6733_0_1, [RH, Score=302, Expect=3e-101]} {RNA1509_13334, RNA1509_45938} {RNA1310_27301, RNA1509_13334, RNA1509_45938} {RNA1509_13334, RNA1509_45938, RNA815_12858} Mlig455_058377 {REF} {Length: 245} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=53.9]; DNA polymerase III, delta subunit [PF13177.8, score=46.9]; Replication factor C C-terminal domain [PF08542.13, score=44.2]; AAA C-terminal domain [PF16193.7, score=23.6]; AAA ATPase domain [PF13191.8, score=21.6]; AAA domain [PF13401.8, score=21.2]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.7]} {Human: ENSG00000163918, RFC4, replication factor C subunit 4, [RH, Score=356, Expect=6e-122]} {Mouse: ENSMUSG00000022881, Rfc4, replication factor C (activator 1) 4, [RH, Score=347, Expect=3e-118]} {Dmel: FBgn0030871, CG8142, [RH, Score=313, Expect=3e-105]} {Celegans: WBGene00004340, rfc-4, Replication factor C subunit 4, [RH, Score=229, Expect=6e-73]} {Smed: dd_Smed_v6_6733_0_1, dd_Smed_v6_6733_0_1, [RH, Score=302, Expect=3e-101]} {RNA1509_13334} {RNA1310_27301} {RNA815_12858} |
Cumulative graph for MligTC455_24045
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.184 | 4.302 | 0.87995 | 1.00000 | |
| RegionR2 | -0.638 | 4.302 | 0.31773 | 0.70863 | |
| RegionR3 | -0.517 | 4.302 | 0.34775 | 0.88286 | |
| RegionR4 | 1.209 | 4.302 | 0.02848 | 0.13101 | |
| RegionR5 | 1.367 | 4.302 | 0.00191 | 0.01680 | |
| RegionR6 | -0.271 | 4.302 | 0.61695 | 1.00000 | |
| RegionR7 | -0.075 | 4.302 | 0.91219 | 1.00000 | |
| RegionR8 | -1.259 | 4.302 | 0.20555 | 0.80617 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.72 | 4.302 | 0.60259 | 1.00000 | |
| RegenerationR2 | 0.081 | 4.302 | 0.88602 | 1.00000 | |
| RegenerationR3 | 1.066 | 4.302 | 0.07474 | 0.45581 | |
| RegenerationR4 | 0.575 | 4.302 | 0.31262 | 0.75222 | |
| RegenerationR5 | 0.303 | 4.302 | 0.56184 | 0.89250 | |
| RegenerationR6 | 1.561 | 4.302 | 0.00909 | 0.11692 | |
| RegenerationBL | 1.628 | 4.302 | 0.00968 | 0.09882 | |
| RegenerationTP | 0.945 | 4.302 | 0.22266 | 0.66653 |
Genes with expression patterns similar to MligTC455_24045
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24045 | 755 | 15.73 | Mlig455_035819, Mlig455_058377 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.434 Region-enriched R5: 1.367/0.01680 |
RFC4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_035819 {REF} {Length: 1266} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=53.9]; DNA polymerase III, delta subunit [PF13177.8, score=46.9]; Replication factor C C-terminal domain [PF08542.13, score=44.2]; AAA C-terminal domain [PF16193.7, score=23.6]; AAA ATPase domain [PF13191.8, score=21.6]; AAA domain [PF13401.8, score=21.2]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.7]} {Human: ENSG00000163918, RFC4, replication factor C subunit 4, [RH, Score=356, Expect=6e-122]} {Mouse: ENSMUSG00000022881, Rfc4, replication factor C (activator 1) 4, [RH, Score=347, Expect=3e-118]} {Dmel: FBgn0030871, CG8142, [RH, Score=313, Expect=3e-105]} {Celegans: WBGene00004340, rfc-4, Replication factor C subunit 4, [RH, Score=229, Expect=6e-73]} {Smed: dd_Smed_v6_6733_0_1, dd_Smed_v6_6733_0_1, [RH, Score=302, Expect=3e-101]} {RNA1509_13334, RNA1509_45938} {RNA1310_27301, RNA1509_13334, RNA1509_45938} {RNA1509_13334, RNA1509_45938, RNA815_12858} Mlig455_058377 {REF} {Length: 245} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=53.9]; DNA polymerase III, delta subunit [PF13177.8, score=46.9]; Replication factor C C-terminal domain [PF08542.13, score=44.2]; AAA C-terminal domain [PF16193.7, score=23.6]; AAA ATPase domain [PF13191.8, score=21.6]; AAA domain [PF13401.8, score=21.2]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.7]} {Human: ENSG00000163918, RFC4, replication factor C subunit 4, [RH, Score=356, Expect=6e-122]} {Mouse: ENSMUSG00000022881, Rfc4, replication factor C (activator 1) 4, [RH, Score=347, Expect=3e-118]} {Dmel: FBgn0030871, CG8142, [RH, Score=313, Expect=3e-105]} {Celegans: WBGene00004340, rfc-4, Replication factor C subunit 4, [RH, Score=229, Expect=6e-73]} {Smed: dd_Smed_v6_6733_0_1, dd_Smed_v6_6733_0_1, [RH, Score=302, Expect=3e-101]} {RNA1509_13334} {RNA1310_27301} {RNA815_12858} |
| 2. | MligTC455_35722 | 1188 | 24.76 | Mlig455_056069, Mlig455_061584 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.153/0.01428 |
2.516 | - | 0.861 | 0.702 | 0.953 | - | - | Mlig455_056069 {REF} {Length: 2813} {TRANSSPLICED} {RNA1509_5890} {RNA1310_6565, RNA1509_5890} {RNA1509_5890, RNA815_1986} Mlig455_061584 {REF} {Length: 2832} {RNA1509_5890} {RNA1310_6565} {RNA815_1986} |
|
| 3. | MligTC455_40215 | 1429 | 29.78 | Mlig455_067705 | Neo: - Age: logFC(26M/2M)=2.990 Region-specific R5: 1.938 Region-enriched R5: 1.502/0.00000 |
1.891 | - | - | - | 0.941 | - | 0.950 | Mlig455_067705 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: A49-like RNA polymerase I associated factor [PF06870.14, score=58.1]} {RNA1509_19206} {RNA1310_18855.1} {RNA815_26021.1} | |
| 4. | MligTC455_43593 | 1419 | 29.57 | Mlig455_040044 | Neo: Irradiation Age: logFC(26M/2M)=0.529 Region-enriched R5: 1.148/0.01204 |
CDK1 | 1.877 | - | - | - | 0.954 | - | 0.923 | Mlig455_040044 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=124.6]; Haspin like kinase domain [PF12330.10, score=23.0]} {Human: ENSG00000170312, CDK1, cyclin dependent kinase 1, [RH, Score=412, Expect=3e-145]} {Mouse: ENSMUSG00000019942, Cdk1, cyclin-dependent kinase 1, [RH, Score=407, Expect=2e-143]} {Dmel: FBgn0004106, Cdk1, Cyclin-dependent kinase 1, [RH, Score=419, Expect=5e-148]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [RH, Score=401, Expect=1e-140]} {Smed: dd_Smed_v6_31502_0_2, dd_Smed_v6_31502_0_2, [RH, Score=413, Expect=2e-145]} {RNA1509_15353, RNA1509_22915} {RNA1310_17831, RNA1509_15353, RNA1509_22915} {RNA1509_15353, RNA1509_22915, RNA815_7489.1} |
| 5. | MligTC455_41228 | 892 | 18.59 | Mlig455_029646 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.317 Region-enriched R5: 1.550/0.00080 |
SAFB | 1.848 | - | - | - | 0.897 | - | 0.951 | Mlig455_029646 {REF} {Length: 2473} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=35.8]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [Score=65.9, Expect=2e-10]} {Mouse: ENSMUSG00000071054, Safb, scaffold attachment factor B, [Score=61.6, Expect=2e-09]} {RNA1509_11846, RNA1509_41823} {RNA1310_8499, RNA1509_11846, RNA1509_41823} {RNA1509_11846, RNA1509_41823, RNA815_6853} |
| 6. | MligTC455_47897 | 1453 | 30.28 | Mlig455_057771 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.541/0.00000 |
ASF1A | 1.834 | - | - | - | 0.869 | - | 0.965 | Mlig455_057771 {REF} {Length: 1164} {TRANSSPLICED} {Pfam: ASF1 like histone chaperone [PF04729.15, score=215.3]} {Human: ENSG00000111875, ASF1A, anti-silencing function 1A histone chaperone, [RH, Score=211, Expect=3e-68]; ENSG00000105011, ASF1B, anti-silencing function 1B histone chaperone, [RH, Score=201, Expect=1e-64]} {Mouse: ENSMUSG00000019857, Asf1a, anti-silencing function 1A histone chaperone, [RH, Score=211, Expect=1e-68]; ENSMUSG00000005470, Asf1b, anti-silencing function 1B histone chaperone, [RH, Score=205, Expect=3e-66]} {Dmel: FBgn0029094, asf1, anti-silencing factor 1, [RH, Score=206, Expect=1e-66]} {Celegans: WBGene00007277, asfl-1, Probable histone chaperone asf-1-like protein, [RH, Score=171, Expect=1e-52]} {Smed: dd_Smed_v6_5120_0_1, dd_Smed_v6_5120_0_1, [RH, Score=211, Expect=1e-68]} {RNA1509_22702, RNA1509_23173, RNA1509_32748} {RNA1310_10040, RNA1509_22702, RNA1509_23173, RNA1509_32748} {RNA1509_22702, RNA1509_23173, RNA1509_32748, RNA815_13388} |
| 7. | MligTC455_34713 | 3644 | 75.91 | Mlig455_012307, Mlig455_031867, Mlig455_031949 | Neo: Neoblast, stringent Age: - |
KPNB1 | 1.741 | 0.775 | - | - | 0.966 | - | - | Mlig455_012307 {REF} {Length: 183} {NoTransDecoderORF} Mlig455_031867 {REF} {Length: 3866} {Pfam: HEAT-like repeat [PF13513.8, score=57.4]; HEAT repeat [PF02985.24, score=40.9]; Importin-beta N-terminal domain [PF03810.21, score=39.1]; HEAT repeats [PF13646.8, score=37.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=23.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.0]} {Human: ENSG00000108424, KPNB1, karyopherin subunit beta 1, [RH, Score=976, Expect=0.0]} {Mouse: ENSMUSG00000001440, Kpnb1, karyopherin (importin) beta 1, [RH, Score=972, Expect=0.0]} {Dmel: FBgn0262743, Fs(2)Ket, Female sterile (2) Ketel, [RH, Score=874, Expect=0.0]} {Celegans: WBGene00002075, imb-1, IMportin Beta family, [RH, Score=720, Expect=0.0]} {Smed: dd_Smed_v6_3466_0_1, dd_Smed_v6_3466_0_1, [RH, Score=863, Expect=0.0]} {RNA1509_1919} {RNA1310_2969} {RNA815_850.1} Mlig455_031949 {REF} {Length: 3861} {Pfam: HEAT-like repeat [PF13513.8, score=58.9]; HEAT repeat [PF02985.24, score=41.2]; Importin-beta N-terminal domain [PF03810.21, score=39.0]; HEAT repeats [PF13646.8, score=36.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=24.0]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=23.1]} {Human: ENSG00000108424, KPNB1, karyopherin subunit beta 1, [RH, Score=983, Expect=0.0]} {Mouse: ENSMUSG00000001440, Kpnb1, karyopherin (importin) beta 1, [RH, Score=979, Expect=0.0]} {Dmel: FBgn0262743, Fs(2)Ket, Female sterile (2) Ketel, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00002075, imb-1, IMportin Beta family, [RH, Score=728, Expect=0.0]} {Smed: dd_Smed_v6_3466_0_1, dd_Smed_v6_3466_0_1, [RH, Score=871, Expect=0.0]} {RNA1509_10050, RNA1509_1919} {RNA1310_2969, RNA1509_10050} {RNA1509_10050, RNA815_850.1} |
| 8. | MligTC455_16141 | 1644 | 34.25 | Mlig455_064276 | Neo: Irradiation Age: Down-Down-Up Region-enriched R5: 1.589/0.00000 |
HPDL | 1.722 | - | - | - | - | 0.758 | 0.964 | Mlig455_064276 {REF} {Length: 1629} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=26.5]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=23.0]} {Human: ENSG00000186603, HPDL, 4-hydroxyphenylpyruvate dioxygenase like, [RH, Score=120, Expect=5e-30]} {Mouse: ENSMUSG00000043155, Hpdl, 4-hydroxyphenylpyruvate dioxygenase-like, [RH, Score=127, Expect=1e-32]} {Dmel: FBgn0036992, CG11796, [Score=103, Expect=7e-25]} {Celegans: WBGene00016294, C31H2.4, Putative protein C31H2.4, [Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_13579_0_1, dd_Smed_v6_13579_0_1, [RH, Score=166, Expect=1e-47]} {RNA1509_3068} {RNA1310_18738} {RNA815_12614} |
| 9. | MligTC455_43457 | 1407 | 29.3 | Mlig455_045812 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.922/0.00001 |
THOC5 | 1.703 | - | - | - | 0.950 | - | 0.753 | Mlig455_045812 {REF} {Length: 2645} {TRANSSPLICED} {Pfam: Fms-interacting protein/Thoc5 [PF09766.11, score=276.0]} {Human: ENSG00000100296, THOC5, THO complex 5, [RH, Score=149, Expect=8e-39]} {Mouse: ENSMUSG00000034274, Thoc5, THO complex 5, [RH, Score=148, Expect=1e-36]} {Dmel: FBgn0034939, thoc5, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00021311, thoc-5, [RH, Score=92.0, Expect=4e-19]} {Smed: dd_Smed_v6_4664_0_1, dd_Smed_v6_4664_0_1, [RH, Score=121, Expect=1e-28]} {RNA1509_4508} {RNA1310_7580, RNA1509_4508} {RNA1509_4508, RNA815_2461} |
| 10. | MligTC455_16140 | 1639 | 34.14 | Mlig455_019088 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.807 Region-enriched R5: 1.616/0.00000 |
HPDL | 1.699 | - | - | - | - | 0.745 | 0.954 | Mlig455_019088 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=26.6]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=23.9]} {Human: ENSG00000186603, HPDL, 4-hydroxyphenylpyruvate dioxygenase like, [RH, Score=117, Expect=6e-29]} {Mouse: ENSMUSG00000043155, Hpdl, 4-hydroxyphenylpyruvate dioxygenase-like, [RH, Score=124, Expect=6e-32]} {Dmel: FBgn0036992, CG11796, [Score=102, Expect=2e-24]} {Celegans: WBGene00016294, C31H2.4, Putative protein C31H2.4, [Score=104, Expect=6e-25]} {Smed: dd_Smed_v6_13579_0_1, dd_Smed_v6_13579_0_1, [RH, Score=167, Expect=6e-48]} {RNA1509_3068} {RNA1310_18738, RNA1509_3068} {RNA1509_3068, RNA815_12614} |
| 11. | MligTC455_50040 | 958 | 19.95 | Mlig455_043732, Mlig455_043823, Mlig455_047426 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.579 Region-enriched R5: 1.551/0.00096 |
1.665 | - | - | 0.711 | - | - | 0.954 | Mlig455_043732 {REF} {Length: 721} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22418} {RNA1310_14285.1} {RNA815_20145} Mlig455_043823 {REF} {Length: 685} {TRANSSPLICED} {RNA1509_56602} {RNA1310_14285.1} {RNA815_20145} Mlig455_047426 {REF} {Length: 685} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22418, RNA1509_54575, RNA1509_56602} {RNA1310_14285.1, RNA1509_22418, RNA1509_54575, RNA1509_56602} {RNA1509_22418, RNA1509_54575, RNA1509_56602, RNA815_20145} |
|
| 12. | MligTC455_48005 | 263 | 5.49 | Mlig455_050181 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.846/0.00759 |
PSMD2 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_050181 {REF} {Length: 4400} {Pfam: RPN1 N-terminal domain [PF17781.3, score=362.1]; 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal [PF18051.3, score=83.9]; Proteasome/cyclosome repeat [PF01851.24, score=58.0]; Ribosomal protein L9, N-terminal domain [PF01281.21, score=22.7]} {Human: ENSG00000175166, PSMD2, proteasome 26S subunit, non-ATPase 2, [RH, Score=880, Expect=0.0]} {Mouse: ENSMUSG00000006998, Psmd2, proteasome (prosome, macropain) 26S subunit, non-ATPase, 2, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0028695, Rpn1, Regulatory particle non-ATPase 1, [RH, Score=829, Expect=0.0]} {Celegans: WBGene00004458, rpn-1, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=788, Expect=0.0]} {Smed: dd_Smed_v6_2481_0_1, dd_Smed_v6_2481_0_1, [RH, Score=929, Expect=0.0]} {RNA1509_1075} {RNA1310_3428} {RNA815_1690} |
| 13. | MligTC455_48473 | 1799 | 37.49 | Mlig455_025739 | Neo: Int S/G2/M Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_025739 {REF} {Length: 1910} {TRANSSPLICED} {RNA1509_2480} {RNA1310_15034, RNA1509_2480} {RNA1509_2480, RNA815_5643} | |
| 14. | MligTC455_36654 | 2861 | 59.61 | Mlig455_054150 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.371 Region-specific R5: 2.958 Region-enriched R5: 2.877/0.00000 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_054150 {REF} {Length: 1361} {TRANSSPLICED} {Pfam: Stathmin family [PF00836.21, score=26.4]} {RNA1509_18964} {RNA1310_24170.1} {RNA815_9667} |