Data search
Results for MligTC455_24116
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24116 | 208 | 4.33 | Mlig455_012157 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.097/0.00506 |
TRAPPC4 | Mlig455_012157 {REF} {Length: 2917} {TRANSSPLICED} {Pfam: Sybindin-like family [PF04099.14, score=136.0]} {Human: ENSG00000280495, TRAPPC4, trafficking protein particle complex 4, [RH, Score=226, Expect=2e-74]; ENSG00000196655, TRAPPC4, trafficking protein particle complex 4, [RH, Score=226, Expect=2e-74]} {Mouse: ENSMUSG00000032112, Trappc4, trafficking protein particle complex 4, [RH, Score=228, Expect=2e-75]} {Dmel: FBgn0260861, Trs23, TRAPP subunit 23, [RH, Score=177, Expect=1e-55]} {Celegans: WBGene00018088, trpp-4, TRansport Protein Particle, [RH, Score=165, Expect=4e-51]} {Smed: dd_Smed_v6_6901_0_1, dd_Smed_v6_6901_0_1, [RH, Score=174, Expect=7e-55]} {RNA1509_24829} {RNA1310_15075} {RNA815_8059.1} |
Cumulative graph for MligTC455_24116
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.976 | 2.773 | 0.29369 | 0.94528 | |
| RegionR2 | -0.382 | 2.773 | 0.94189 | 1.00000 | |
| RegionR3 | 0.591 | 2.773 | 0.51944 | 1.00000 | |
| RegionR4 | 1.373 | 2.773 | 0.15979 | 0.41674 | |
| RegionR5 | 2.097 | 2.773 | 0.00041 | 0.00506 | |
| RegionR6 | 0.705 | 2.773 | 0.44353 | 1.00000 | |
| RegionR7 | 1.181 | 2.773 | 0.21662 | 0.83447 | |
| RegionR8 | -0.59 | 2.773 | 0.96517 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.147 | 2.773 | 0.99993 | 1.00000 | |
| RegenerationR2 | -0.03 | 2.773 | 0.95368 | 1.00000 | |
| RegenerationR3 | -0.122 | 2.773 | 0.84296 | 0.99550 | |
| RegenerationR4 | -0.883 | 2.773 | 0.19359 | 0.63817 | |
| RegenerationR5 | -1.059 | 2.773 | 0.03952 | 0.32733 | |
| RegenerationR6 | -1.149 | 2.773 | 0.10201 | 0.39539 | |
| RegenerationBL | -0.059 | 2.773 | 0.94957 | 1.00000 | |
| RegenerationTP | -0.809 | 2.773 | 0.41059 | 0.83733 |
Genes with expression patterns similar to MligTC455_24116
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24116 | 208 | 4.33 | Mlig455_012157 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.097/0.00506 |
TRAPPC4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012157 {REF} {Length: 2917} {TRANSSPLICED} {Pfam: Sybindin-like family [PF04099.14, score=136.0]} {Human: ENSG00000280495, TRAPPC4, trafficking protein particle complex 4, [RH, Score=226, Expect=2e-74]; ENSG00000196655, TRAPPC4, trafficking protein particle complex 4, [RH, Score=226, Expect=2e-74]} {Mouse: ENSMUSG00000032112, Trappc4, trafficking protein particle complex 4, [RH, Score=228, Expect=2e-75]} {Dmel: FBgn0260861, Trs23, TRAPP subunit 23, [RH, Score=177, Expect=1e-55]} {Celegans: WBGene00018088, trpp-4, TRansport Protein Particle, [RH, Score=165, Expect=4e-51]} {Smed: dd_Smed_v6_6901_0_1, dd_Smed_v6_6901_0_1, [RH, Score=174, Expect=7e-55]} {RNA1509_24829} {RNA1310_15075} {RNA815_8059.1} |
| 2. | MligTC455_42090 | 625 | 13.03 | Mlig455_003814 | Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R5: 1.603/0.00005 |
POLD2 | 2.466 | 0.738 | 0.777 | - | - | - | 0.951 | Mlig455_003814 {REF} {Length: 2103} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=147.9]; DNA polymerase delta subunit OB-fold domain [PF18018.3, score=132.3]} {Human: ENSG00000106628, POLD2, DNA polymerase delta 2, accessory subunit, [RH, Score=345, Expect=3e-114]} {Mouse: ENSMUSG00000020471, Pold2, polymerase (DNA directed), delta 2, regulatory subunit, [RH, Score=350, Expect=2e-116]} {Dmel: FBgn0027903, CG12018, [RH, Score=282, Expect=1e-90]} {Celegans: WBGene00008722, F12F6.7, Probable DNA polymerase delta small subunit, [RH, Score=161, Expect=2e-44]} {Smed: dd_Smed_v6_8399_0_1, dd_Smed_v6_8399_0_1, [RH, Score=244, Expect=8e-76]} {RNA1509_24914, RNA1509_35013} {RNA1310_19622.1, RNA1509_24914, RNA1509_35013} {RNA1509_24914, RNA1509_35013, RNA815_16200} |
| 3. | MligTC455_48896 | 500 | 10.41 | Mlig455_002778, Mlig455_066931 | Neo: - Age: Up-Down-Down |
0.984 | - | - | - | 0.984 | - | - | Mlig455_002778 {REF} {Length: 6321} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=23.0]} {RNA1509_25434} {RNA1310_17375.1, RNA1509_25434} {RNA1509_25434, RNA815_11943} Mlig455_066931 {REF} {Length: 5647} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=24.3]} {RNA1509_25434} {RNA1310_17375.1} {RNA815_11943} |
|
| 4. | MligTC455_40671 | 35 | 0.74 | Mlig455_022100 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_022100 {REF} {Length: 2458} {NoTransDecoderORF} {RNA1310_87660} | |
| 5. | MligTC455_52317 | 601 | 12.52 | Mlig455_033566, Mlig455_067055 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.472 Region-specific R4: 2.993 Region-enriched R4: 1.541/0.03503 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_033566 {REF} {Length: 2579} {RNA1509_16079, RNA1509_16174, RNA1509_16958} {RNA1310_11902.1, RNA1509_16079, RNA1509_16958} {RNA1509_16079, RNA1509_16958, RNA815_13985} Mlig455_067055 {REF} {Length: 2409} {RNA1509_16174} {RNA1310_11902.1} {RNA815_13985} |
|
| 6. | MligTC455_52080 | 834 | 17.38 | Mlig455_022728 | Neo: - Age: - |
CRBN | 0.958 | - | - | - | - | - | 0.958 | Mlig455_022728 {REF} {Length: 1810} {TRANSSPLICED} {Pfam: Yippee zinc-binding/DNA-binding /Mis18, centromere assembly [PF03226.16, score=28.7]; ATP-dependent protease La (LON) substrate-binding domain [PF02190.18, score=23.3]} {Human: ENSG00000113851, CRBN, cereblon, [RH, Score=201, Expect=2e-59]} {Mouse: ENSMUSG00000005362, Crbn, cereblon, [RH, Score=202, Expect=6e-60]} {Dmel: FBgn0037780, ohgt, ohgata, [Score=104, Expect=8e-24]} {Smed: dd_Smed_v6_9305_0_1, dd_Smed_v6_9305_0_1, [Score=148, Expect=2e-39]} {RNA1509_23576, RNA1509_42614, RNA1509_57688} {RNA1310_17277, RNA1509_23576, RNA1509_42614, RNA1509_57688} {RNA1509_23576, RNA1509_42614, RNA1509_57688, RNA815_18844} |
| 7. | MligTC455_20065 | 1482 | 30.87 | Mlig455_000221, Mlig455_058479 | Neo: - Age: Down-Up-Up |
PIGW | 0.953 | - | - | - | - | - | 0.953 | Mlig455_000221 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: GWT1 [PF06423.14, score=72.6]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=100, Expect=1e-21]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=115, Expect=4e-27]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=120, Expect=6e-29]} {RNA1509_19464, RNA1509_29630} {RNA1310_6153, RNA1509_19464, RNA1509_29630} {RNA1509_19464, RNA1509_29630, RNA815_7740} Mlig455_058479 {REF} {Length: 2310} {Pfam: GWT1 [PF06423.14, score=70.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=113, Expect=2e-26]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=6e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=119, Expect=1e-28]} {RNA1509_19464} {RNA1310_6153} {RNA815_7740} |