M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_24135

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24135 81 1.69 Mlig455_032991

Neo: -

Age: -

 Mlig455_032991 {REF} {Length: 1969} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56623} {RNA1310_14956.1} {RNA815_25372}

Cumulative graph for MligTC455_24135

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.057 1.783 0.49200 1.00000
RegionR2 2.291 1.783 0.08427 0.35665
RegionR3 1.082 1.783 0.37667 0.90959
RegionR4 0.758 1.783 0.55688 0.87677
RegionR5 1.239 1.783 0.27554 0.60203
RegionR6 0.985 1.783 0.43307 0.99563
RegionR7 1.17 1.783 0.42071 1.00000
RegionR8 -3.468 1.783 0.99964 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.032 1.783 1.00000 1.00000
RegenerationR2 -0.112 1.783 0.87747 1.00000
RegenerationR3 0.688 1.783 0.48957 0.85384
RegenerationR4 1.319 1.783 0.21076 0.65844
RegenerationR5 1.076 1.783 0.20820 0.64194
RegenerationR6 0.559 1.783 0.60600 0.87166
RegenerationBL 1.135 1.783 0.52224 0.88329
RegenerationTP 2.789 1.783 0.12777 0.54006


Genes with expression patterns similar to MligTC455_24135

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24135 81 1.69 Mlig455_032991

Neo: -

Age: -

 4 1.000 - 1.000 1.000 - 1.000 Mlig455_032991 {REF} {Length: 1969} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56623} {RNA1310_14956.1} {RNA815_25372}
2. MligTC455_24136 97 2.03 Mlig455_041858

Neo: -

Age: logFC(26M/2M)=0.599

 1.921 0.952 - 0.969 - - - Mlig455_041858 {REF} {Length: 4332} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.0]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=83.2, Expect=2e-17]} {RNA1509_53407} {RNA1310_19264, RNA1509_53407} {RNA1509_53407, RNA815_25372}
3. MligTC455_21754 21 0.44 Mlig455_021167

Neo: -

Age: Down-Up-Down

 0.996 - - 0.996 - - - Mlig455_021167 {REF} {Length: 1412} {Pfam: F5/8 type C domain [PF00754.27, score=37.1]} {RNA1310_25631} {RNA815_14716}
4. MligTC455_12312 158 3.3 Mlig455_020134, Mlig455_045030

Neo: -

Age: -

 SYT7 0.987 - - 0.987 - - -

Mlig455_020134 {REF} {Length: 2000} {Pfam: C2 domain [PF00168.32, score=69.8]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=130, Expect=1e-31]} {Mouse: ENSMUSG00000024743, Syt7, synaptotagmin VII, [Score=119, Expect=2e-28]; ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=116, Expect=1e-27]; ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=116, Expect=8e-28]} {Dmel: FBgn0261089, Sytalpha, Synaptotagmin alpha, [Score=157, Expect=5e-42]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=116, Expect=3e-28]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=115, Expect=2e-28]} {RNA1509_46689} {RNA1310_12025} {RNA815_31022}

Mlig455_045030 {REF} {Length: 3640} {Pfam: C2 domain [PF00168.32, score=110.2]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=169, Expect=6e-45]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=164, Expect=9e-45]; ENSG00000170743, SYT9, synaptotagmin 9, [Score=163, Expect=6e-44]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=164, Expect=7e-45]; ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=164, Expect=2e-44]; ENSMUSG00000024743, Syt7, synaptotagmin VII, [Score=158, Expect=9e-42]} {Dmel: FBgn0261089, Sytalpha, Synaptotagmin alpha, [RH, Score=202, Expect=2e-58]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=153, Expect=6e-41]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=160, Expect=5e-44]} {RNA1509_46689} {RNA1310_12025} {RNA815_31022}
5. MligTC455_14085 29 0.61 Mlig455_002893

Neo: -

Age: Up-Down-Down

Region-enriched R2: 6.406/0.01193

 PPP2R5D 0.985 - - 0.985 - - - Mlig455_002893 {REF} {Length: 4141} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=580.3]} {Human: ENSG00000112640, PPP2R5D, protein phosphatase 2 regulatory subunit B'delta, [RH, Score=675, Expect=0.0]; ENSG00000078304, PPP2R5C, protein phosphatase 2 regulatory subunit B'gamma, [RH, Score=647, Expect=0.0]} {Mouse: ENSMUSG00000059409, Ppp2r5d, protein phosphatase 2, regulatory subunit B', delta, [RH, Score=677, Expect=0.0]; ENSMUSG00000017843, Ppp2r5c, protein phosphatase 2, regulatory subunit B', gamma, [RH, Score=645, Expect=0.0]} {Dmel: FBgn0042693, wrd, well-rounded, [RH, Score=654, Expect=0.0]} {Celegans: WBGene00007554, pptr-2, Protein Phosphatase 2A (Two A) Regulatory subunit, [RH, Score=638, Expect=0.0]} {Smed: dd_Smed_v6_3379_0_1, dd_Smed_v6_3379_0_1, [RH, Score=665, Expect=0.0]} {RNA1509_7339} {RNA1310_39381} {RNA815_26062}
6. MligTC455_12514 30 0.63 Mlig455_037415

Neo: -

Age: -

 CHRNA6 0.984 - - 0.984 - - - Mlig455_037415 {REF} {Length: 1606} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=77.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=77.4, Expect=4e-16]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=75.1, Expect=2e-15]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=73.9, Expect=7e-15]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=80.5, Expect=3e-17]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=84.7, Expect=7e-19]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=72.8, Expect=5e-15]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=82.0, Expect=3e-18]} {RNA1509_53098} {RNA1310_110770} {RNA815_49679}
7. MligTC455_13095 40 0.82 Mlig455_036239

Neo: -

Age: -

 0.978 - - 0.978 - - - Mlig455_036239 {REF} {Length: 2786} {RNA1509_41201} {RNA1310_51044} {RNA815_51130}
8. MligTC455_50464 64 1.34 Mlig455_007906, Mlig455_008010

Neo: -

Age: -

 0.977 - - 0.977 - - -

Mlig455_007906 {REF} {Length: 3294} {RNA1509_46103} {RNA1310_23886.1} {RNA815_8813.1}

Mlig455_008010 {REF} {Length: 1139} {RNA1509_46103} {RNA1310_23886.1} {RNA815_8813.1}
9. MligTC455_17218 37 0.78 Mlig455_053853

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_053853 {REF} {Length: 1743} {RNA1310_61921}
10. MligTC455_24271 22 0.45 Mlig455_005190

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_005190 {REF} {Length: 600} {RNA1509_43533} {RNA1310_100097} {RNA815_22406}
11. MligTC455_40800 67 1.41 Mlig455_028979

Neo: -

Age: logFC(26M/2M)=-0.452

 DAPK1 0.974 - - 0.974 - - - Mlig455_028979 {REF} {Length: 4667} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=123.2]; Ankyrin repeats (many copies) [PF13637.8, score=90.4]; Ankyrin repeats (many copies) [PF13857.8, score=83.4]; Ankyrin repeat [PF00023.32, score=79.6]; Ankyrin repeat [PF13606.8, score=67.2]; Death domain [PF00531.24, score=55.4]; C-terminal of Roc, COR, domain [PF16095.7, score=23.0]} {Human: ENSG00000196730, DAPK1, death associated protein kinase 1, [Score=433, Expect=1e-130]} {Mouse: ENSMUSG00000021559, Dapk1, death associated protein kinase 1, [Score=429, Expect=5e-129]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=124, Expect=3e-28]} {Celegans: WBGene00003400, dapk-1, Death-associated protein kinase dapk-1, [Score=462, Expect=4e-145]} {Smed: dd_Smed_v6_9475_0_1, dd_Smed_v6_9475_0_1, [Score=795, Expect=0.0]} {RNA1509_32836} {RNA1310_4314, RNA1509_32836} {RNA1509_32836, RNA815_16120}
12. MligTC455_16054 25 0.52 Mlig455_031933

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_031933 {REF} {Length: 666} {RNA1310_71129.1} {RNA815_34113}
13. MligTC455_48935 27 0.57 Mlig455_041669

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_041669 {REF} {Length: 1052} {Smed: dd_Smed_v6_3795_0_1, dd_Smed_v6_3795_0_1, [Score=56.2, Expect=8e-10]} {RNA1310_58309} {RNA815_39074}
14. MligTC455_47601 126 2.62 Mlig455_056477

Neo: -

Age: Up-Down-Up

 NRXN1 0.97 - - 0.970 - - - Mlig455_056477 {REF} {Length: 3481} {Pfam: Laminin G domain [PF02210.26, score=58.3]; Laminin G domain [PF00054.25, score=43.2]; Syndecan domain [PF01034.22, score=27.4]} {Human: ENSG00000179915, NRXN1, neurexin 1, [Score=142, Expect=4e-35]} {Mouse: ENSMUSG00000024109, Nrxn1, neurexin I, [Score=142, Expect=1e-35]} {Dmel: FBgn0038975, Nrx-1, Neurexin 1, [Score=102, Expect=2e-22]} {Smed: dd_Smed_v6_13697_0_1, dd_Smed_v6_13697_0_1, [Score=142, Expect=8e-36]} {RNA1509_55888} {RNA1310_37025, RNA1509_55888} {RNA1509_55888, RNA815_22404}
15. MligTC455_16587 12 0.25 Mlig455_070694

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_070694 {REF} {Length: 2169} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=51.1]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=47.4, Expect=5e-06]} {RNA1509_48973} {RNA1310_67118.1} {RNA815_36286}
16. MligTC455_00623 61 1.26 Mlig455_008443

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_008443 {REF} {Length: 513} {Dmel: FBgn0029807, CG3108, [Score=52.0, Expect=5e-08]} {RNA815_25060}
17. MligTC455_14294 37 0.78 Mlig455_045370

Neo: -

Age: -

 PCDH1 0.964 - - 0.964 - - - Mlig455_045370 {REF} {Length: 4947} {Pfam: Cadherin domain [PF00028.19, score=241.5]; Cadherin-like [PF08266.14, score=35.4]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=237, Expect=3e-63]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=239, Expect=1e-64]} {Dmel: FBgn0284247, ds, dachsous, [Score=203, Expect=2e-52]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=154, Expect=1e-37]} {Smed: dd_Smed_v6_21207_0_1, dd_Smed_v6_21207_0_1, [Score=263, Expect=7e-73]} {RNA1509_45430} {RNA1310_20787, RNA1509_45430} {RNA1509_45430, RNA815_48081}
18. MligTC455_18535 29 0.61 Mlig455_035051

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_035051 {REF} {Length: 1809} {RNA1310_97662}
19. MligTC455_46790 483 10.07 Mlig455_004545, Mlig455_028546

Neo: -

Age: Down-Up-Down

 DXO 0.964 - - - - - 0.964

Mlig455_004545 {REF} {Length: 3002} {TRANSSPLICED} {Pfam: RAI1 like PD-(D/E)XK nuclease [PF08652.13, score=40.0]} {Human: ENSG00000234798, DXO, decapping exoribonuclease, [RH, Score=112, Expect=1e-26]; ENSG00000204348, DXO, decapping exoribonuclease, [RH, Score=112, Expect=1e-26]; ENSG00000225682, DXO, decapping exoribonuclease, [RH, Score=112, Expect=1e-26]; ENSG00000236765, DXO, decapping exoribonuclease, [RH, Score=112, Expect=1e-26]; ENSG00000224313, DXO, decapping exoribonuclease, [RH, Score=112, Expect=1e-26]; ENSG00000206346, DXO, decapping exoribonuclease, [RH, Score=112, Expect=1e-26]} {Mouse: ENSMUSG00000040482, Dxo, decapping exoribonuclease, [RH, Score=112, Expect=8e-27]} {RNA1509_20022} {RNA1310_13788} {RNA815_32091}

Mlig455_028546 {REF} {Length: 2795} {TRANSSPLICED} {Pfam: RAI1 like PD-(D/E)XK nuclease [PF08652.13, score=39.8]} {Human: ENSG00000234798, DXO, decapping exoribonuclease, [RH, Score=111, Expect=5e-26]; ENSG00000204348, DXO, decapping exoribonuclease, [RH, Score=111, Expect=5e-26]; ENSG00000225682, DXO, decapping exoribonuclease, [RH, Score=111, Expect=5e-26]; ENSG00000236765, DXO, decapping exoribonuclease, [RH, Score=111, Expect=5e-26]; ENSG00000224313, DXO, decapping exoribonuclease, [RH, Score=111, Expect=5e-26]; ENSG00000206346, DXO, decapping exoribonuclease, [RH, Score=111, Expect=5e-26]} {Mouse: ENSMUSG00000040482, Dxo, decapping exoribonuclease, [RH, Score=112, Expect=3e-26]} {Celegans: WBGene00021872, clec-85, C-type LECtin, [Score=49.7, Expect=2e-06]} {Smed: dd_Smed_v6_2899_0_1, dd_Smed_v6_2899_0_1, [Score=49.3, Expect=6e-06]} {RNA1509_20022} {RNA1310_13788} {RNA815_32091}
20. MligTC455_18906 294 6.12 Mlig455_063115

Neo: Irradiation

Age: -

Regeneration-upregulated R6: 3.274

Regeneration-enriched R6: 3.274

 0.961 - - 0.961 - - - Mlig455_063115 {REF} {Length: 1769} {Pfam: BTB/POZ domain [PF00651.33, score=38.8]; Monogalactosyldiacylglycerol (MGDG) synthase [PF06925.13, score=18.7]} {RNA1509_17649} {RNA1310_15518, RNA1509_17649} {RNA1509_17649, RNA815_7807}
21. MligTC455_29725 72 1.49 Mlig455_014390

Neo: -

Age: -

Region-enriched R2: 7.905/0.00012

 OTOP2 0.961 - - 0.961 - - - Mlig455_014390 {REF} {Length: 2547} {Pfam: Otopetrin [PF03189.15, score=220.6]} {Human: ENSG00000183034, OTOP2, otopetrin 2, [Score=52.0, Expect=3e-06]; ENSG00000163982, OTOP1, otopetrin 1, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000051596, Otop1, otopetrin 1, [Score=53.5, Expect=7e-07]; ENSMUSG00000050201, Otop2, otopetrin 2, [Score=51.6, Expect=3e-06]} {Dmel: FBgn0259150, CG42265, [Score=177, Expect=3e-46]} {Celegans: WBGene00017034, otpl-2, OToPetrin-Like, [Score=101, Expect=2e-22]} {Smed: dd_Smed_v6_13612_0_3, dd_Smed_v6_13612_0_3, [Score=276, Expect=7e-84]} {RNA1310_55206} {RNA815_48323}
22. MligTC455_21325 36 0.75 Mlig455_053949

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.422

 SLC4A10 0.96 - - 0.960 - - - Mlig455_053949 {REF} {Length: 5641} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=719.0]; Band 3 cytoplasmic domain [PF07565.15, score=297.5]; Sulfate permease family [PF00916.22, score=19.2]} {Human: ENSG00000144290, SLC4A10, solute carrier family 4 member 10, [Score=947, Expect=0.0]; ENSG00000050438, SLC4A8, solute carrier family 4 member 8, [Score=935, Expect=0.0]} {Mouse: ENSMUSG00000023032, Slc4a8, solute carrier family 4 (anion exchanger), member 8, [Score=946, Expect=0.0]; ENSMUSG00000026904, Slc4a10, solute carrier family 4, sodium bicarbonate cotransporter-like, member 10, [Score=946, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=634, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [Score=612, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [Score=1208, Expect=0.0]} {RNA1509_21197} {RNA1310_2601, RNA1509_21197} {RNA1509_21197, RNA815_7793.1}
23. MligTC455_38227 131 2.73 Mlig455_049364

Neo: -

Age: Down-Up-Up

Region-enriched R2: 5.468/0.02435

 0.96 - - 0.960 - - - Mlig455_049364 {REF} {Length: 726} {RNA1509_22173} {RNA1310_65747} {RNA815_15489}
24. MligTC455_45910 20 0.42 Mlig455_068873

Neo: -

Age: -

 ANGPT4 0.96 - - 0.960 - - - Mlig455_068873 {REF} {Length: 1013} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=111.7]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=95.1, Expect=7e-22]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=91.3, Expect=2e-20]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=93.6, Expect=3e-22]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=93.2, Expect=1e-21]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=90.9, Expect=1e-20]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=89.4, Expect=4e-20]} {Dmel: FBgn0087011, CG41520, [Score=87.0, Expect=2e-19]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=105, Expect=7e-26]} {RNA1310_32728} {RNA815_23388}
25. MligTC455_43792 46 0.95 Mlig455_042182

Neo: -

Age: -

Region-enriched R2: 5.308/0.00581

 PROX1 0.959 - - 0.959 - - - Mlig455_042182 {REF} {Length: 3596} {Pfam: Homeo-prospero domain [PF05044.14, score=266.0]} {Human: ENSG00000117707, PROX1, prospero homeobox 1, [RH, Score=225, Expect=2e-62]} {Mouse: ENSMUSG00000010175, Prox1, prospero homeobox 1, [RH, Score=226, Expect=1e-62]; ENSMUSG00000042320, Prox2, prospero homeobox 2, [RH, Score=215, Expect=7e-60]} {Dmel: FBgn0004595, pros, prospero, [RH, Score=276, Expect=1e-77]} {Celegans: WBGene00000448, pros-1, Homeobox protein prospero homolog 1, [RH, Score=235, Expect=2e-67]} {Smed: dd_Smed_v6_13772_0_1, dd_Smed_v6_13772_0_1, [RH, Score=214, Expect=4e-61]} {RNA1310_40402} {RNA815_25114}
26. MligTC455_51154 45 0.94 Mlig455_045899

Neo: -

Age: -

 CPED1 0.959 - - 0.959 - - - Mlig455_045899 {REF} {Length: 3530} {Human: ENSG00000106034, CPED1, cadherin like and PC-esterase domain containing 1, [RH, Score=178, Expect=2e-47]} {Mouse: ENSMUSG00000062980, Cped1, cadherin-like and PC-esterase domain containing 1, [RH, Score=179, Expect=6e-48]} {Smed: dd_Smed_v6_14757_0_1, dd_Smed_v6_14757_0_1, [RH, Score=188, Expect=3e-53]} {RNA1509_12903} {RNA1310_19899.1} {RNA815_44464}
27. MligTC455_10953 148 3.08 Mlig455_060864, Mlig455_063528

Neo: -

Age: Up-Down-Down

Region-enriched R2: 4.497/0.01237
Region-enriched R5: 3.064/0.03185

 KCNH7 0.957 - - 0.957 - - -

Mlig455_060864 {REF} {Length: 7144} {Pfam: Ion transport protein [PF00520.33, score=117.5]; Cyclic nucleotide-binding domain [PF00027.31, score=52.7]; Ion channel [PF07885.18, score=45.4]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [Score=777, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [Score=760, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [Score=751, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [Score=776, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [Score=761, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [Score=751, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [Score=741, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=712, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [Score=798, Expect=0.0]} {RNA1509_40124} {RNA1310_4074} {RNA815_8044}

Mlig455_063528 {REF} {Length: 734} {NoTransDecoderORF}
28. MligTC455_35862 39 0.82 Mlig455_025750

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_025750 {REF} {Length: 4430} {Pfam: Interferon-related protein conserved region [PF04836.14, score=35.0]} {RNA1509_56926} {RNA1310_49079} {RNA815_25175.1}
29. MligTC455_01861 30 0.63 Mlig455_046027

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_046027 {REF} {Length: 736} {RNA1310_50531} {RNA815_29422}
30. MligTC455_38565 45 0.93 Mlig455_054917

Neo: -

Age: -

 PCDH11X 0.954 - - 0.954 - - - Mlig455_054917 {REF} {Length: 4432} {Pfam: Cadherin domain [PF00028.19, score=225.5]; Cadherin-like [PF08266.14, score=38.0]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=237, Expect=4e-63]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=236, Expect=3e-63]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=238, Expect=6e-64]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=231, Expect=6e-62]; ENSMUSG00000044043, Pcdhb14, protocadherin beta 14, [Score=228, Expect=1e-61]; ENSMUSG00000045876, Pcdhb8, protocadherin beta 8, [Score=227, Expect=1e-61]} {Dmel: FBgn0284247, ds, dachsous, [Score=211, Expect=1e-54]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=168, Expect=9e-42]} {Smed: dd_Smed_v6_7973_0_2, dd_Smed_v6_7973_0_2, [Score=267, Expect=1e-73]} {RNA1310_85042}
31. MligTC455_12992 102 2.12 Mlig455_034920

Neo: -

Age: -

Region-enriched R2: 3.155/0.02568

 RAC2 0.953 - - 0.953 - - - Mlig455_034920 {REF} {Length: 3245} {Pfam: Ras family [PF00071.24, score=175.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=80.0]; ADP-ribosylation factor family [PF00025.23, score=32.7]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=277, Expect=1e-95]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=273, Expect=6e-94]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=275, Expect=3e-95]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=273, Expect=4e-94]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=263, Expect=3e-90]} {Dmel: FBgn0010333, Rac1, [Score=270, Expect=2e-93]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=268, Expect=2e-92]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=251, Expect=4e-86]} {RNA1509_26483} {RNA1310_31644} {RNA815_16762}
32. MligTC455_34066 149 3.1 Mlig455_069292

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_069292 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_20753} {RNA1310_16791} {RNA815_12674.1}
33. MligTC455_14317 18 0.37 Mlig455_032329

Neo: -

Age: -

Region-enriched R2: 9.341/0.00123
Region-enriched R3: 4.750/0.03053
Region-enriched R5: 3.394/0.03262

 0.952 - - 0.952 - - - Mlig455_032329 {REF} {Length: 1038} {RNA1509_48973} {RNA1310_34931} {RNA815_36286}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA