TomoSeq data search

Data search

Results for MligTC455_24139

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24139

298

6.21

Mlig455_013495

Neo: -

Age: -

Regeneration-upregulated R5: 2.788

Regeneration-enriched R5: 2.788

PLXNA4

Mlig455_013495 {REF} {Length: 8044} {Pfam: Plexin cytoplasmic RasGAP domain [PF08337.14, score=307.2]; Plexin repeat [PF01437.27, score=36.0]} {Human: ENSG00000221866, PLXNA4, plexin A4, [RH, Score=325, Expect=4e-89]; ENSG00000114554, PLXNA1, plexin A1, [RH, Score=322, Expect=4e-88]} {Mouse: ENSMUSG00000029765, Plxna4, plexin A4, [RH, Score=320, Expect=9e-88]; ENSMUSG00000030084, Plxna1, plexin A1, [RH, Score=314, Expect=1e-85]} {Dmel: FBgn0025741, PlexA, Plexin A, [Score=337, Expect=6e-93]} {Celegans: WBGene00004047, plx-1, PLeXin, [Score=345, Expect=1e-95]} {Smed: dd_Smed_v6_11934_0_1, dd_Smed_v6_11934_0_1, [RH, Score=153, Expect=8e-37]} {RNA1509_5684} {RNA1310_370.2} {RNA815_1103.1}

Cumulative graph for MligTC455_24139

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.384	2.862	0.38390	1.00000
RegionR2	1.075	2.862	0.27165	0.65618
RegionR3	1.035	2.862	0.20216	0.74234
RegionR4	0.568	2.862	0.58399	0.89987
RegionR5	-1.975	2.862	0.99909	1.00000
RegionR6	1.105	2.862	0.18564	0.75135
RegionR7	1.227	2.862	0.21695	0.83494
RegionR8	1.35	2.862	0.21244	0.81646

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.184	2.862	0.19295	0.93143
RegenerationR2	0.919	2.862	0.05958	0.40085
RegenerationR3	0.197	2.862	0.74728	0.96336
RegenerationR4	0.894	2.862	0.19805	0.64357
RegenerationR5	2.788	2.862	0.00005	0.00891	Specific for R5: 2.788
RegenerationR6	0.847	2.862	0.16179	0.49084
RegenerationBL	-1.246	2.862	0.22494	0.57413
RegenerationTP	0.296	2.862	0.69415	1.00000

Genes with expression patterns similar to MligTC455_24139

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24139	298	6.21	Mlig455_013495	Neo: - Age: - Regeneration-upregulated R5: 2.788 Regeneration-enriched R5: 2.788	PLXNA4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013495 {REF} {Length: 8044} {Pfam: Plexin cytoplasmic RasGAP domain [PF08337.14, score=307.2]; Plexin repeat [PF01437.27, score=36.0]} {Human: ENSG00000221866, PLXNA4, plexin A4, [RH, Score=325, Expect=4e-89]; ENSG00000114554, PLXNA1, plexin A1, [RH, Score=322, Expect=4e-88]} {Mouse: ENSMUSG00000029765, Plxna4, plexin A4, [RH, Score=320, Expect=9e-88]; ENSMUSG00000030084, Plxna1, plexin A1, [RH, Score=314, Expect=1e-85]} {Dmel: FBgn0025741, PlexA, Plexin A, [Score=337, Expect=6e-93]} {Celegans: WBGene00004047, plx-1, PLeXin, [Score=345, Expect=1e-95]} {Smed: dd_Smed_v6_11934_0_1, dd_Smed_v6_11934_0_1, [RH, Score=153, Expect=8e-37]} {RNA1509_5684} {RNA1310_370.2} {RNA815_1103.1}
2.	MligTC455_17967	3579	74.57	Mlig455_051723, Mlig455_051747	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.373 Region-enriched R2: 2.354/0.00024 Region-enriched R7: 1.586/0.02362 Region-enriched R6: 1.575/0.01589		1.706	-	-	0.960	0.746	-	-	Mlig455_051723 {REF} {Length: 1123} {Pfam: YqbF, hypothetical protein domain [PF14553.8, score=33.4]; Zinc-finger of nitric oxide synthase-interacting protein [PF15906.7, score=21.7]; Protein of unknown function (DUF559) [PF04480.14, score=20.6]} {RNA1509_16925} {RNA1310_34603.1} {RNA815_20381} Mlig455_051747 {REF} {Length: 1166} {Pfam: YqbF, hypothetical protein domain [PF14553.8, score=36.0]; Zinc-finger of nitric oxide synthase-interacting protein [PF15906.7, score=25.9]; Protein of unknown function (DUF559) [PF04480.14, score=22.5]; REase_MTES_1575 [PF18741.3, score=20.8]; CW_7 repeat [PF08230.13, score=19.3]} {RNA1509_16925} {RNA1310_34603.1} {RNA815_20381}
3.	MligTC455_13047	662	13.78	Mlig455_043461	Neo: - Age: - Region-enriched R6: 1.614/0.00009		1.702	-	-	-	-	0.730	0.972	Mlig455_043461 {REF} {Length: 3112} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=48.4]; Lipoma HMGIC fusion partner-like protein [PF10242.11, score=24.0]} {Dmel: FBgn0010894, sinu, sinuous, [RH, Score=100, Expect=4e-25]} {Smed: dd_Smed_v6_2132_0_1, dd_Smed_v6_2132_0_1, [RH, Score=201, Expect=8e-64]} {RNA1509_30798, RNA1509_31427, RNA1509_60124} {RNA1310_20953.2, RNA1509_30798, RNA1509_31427, RNA1509_60124} {RNA1509_30798, RNA1509_31427, RNA1509_60124, RNA815_18897.1}
4.	MligTC455_17966	1490	31.04	Mlig455_026737	Neo: - Age: logFC(26M/2M)=-0.346 Region-specific R2: 3.759 Region-enriched R2: 2.729/0.00000 Region-enriched R6: 1.885/0.00048 Regeneration-downregulated R6: -2.271 Regeneration-depleted R6: -2.271		1.691	-	-	0.958	0.733	-	-	Mlig455_026737 {REF} {Length: 1222} {Pfam: YqbF, hypothetical protein domain [PF14553.8, score=36.3]; Zinc-finger of nitric oxide synthase-interacting protein [PF15906.7, score=26.5]; Protein of unknown function (DUF559) [PF04480.14, score=20.7]; REase_MTES_1575 [PF18741.3, score=20.0]} {RNA1509_18273} {RNA1310_34603.1} {RNA815_20381}
5.	MligTC455_25727	1329	27.68	Mlig455_008944	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_008944 {REF} {Length: 2871} {TRANSSPLICED} {Pfam: Membrane-associating domain [PF01284.25, score=18.7]} {Smed: dd_Smed_v6_2540_0_1, dd_Smed_v6_2540_0_1, [RH, Score=49.7, Expect=1e-07]} {RNA1509_23314, RNA1509_38959} {RNA1310_39518, RNA1509_23314, RNA1509_38959} {RNA1509_23314, RNA1509_38959, RNA815_22089.1}
6.	MligTC455_21218	254	5.29	Mlig455_039115	Neo: - Age: logFC(26M/2M)=0.413		0.961	-	-	-	0.961	-	-	Mlig455_039115 {REF} {Length: 3877} {RNA1509_42019} {RNA1310_12333.1, RNA1509_42019} {RNA1509_42019, RNA815_15134}
7.	MligTC455_46567	749	15.6	Mlig455_023565	Neo: - Age: -	GNB2	0.96	-	-	-	-	-	0.960	Mlig455_023565 {REF} {Length: 2708} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=144.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.6]; WD40-like domain [PF17005.7, score=18.1]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=17.9]} {Human: ENSG00000172354, GNB2, G protein subunit beta 2, [RH, Score=602, Expect=0.0]; ENSG00000114450, GNB4, G protein subunit beta 4, [RH, Score=601, Expect=0.0]; ENSG00000078369, GNB1, G protein subunit beta 1, [RH, Score=595, Expect=0.0]; ENSG00000111664, GNB3, G protein subunit beta 3, [RH, Score=581, Expect=0.0]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [RH, Score=602, Expect=0.0]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [RH, Score=595, Expect=0.0]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [RH, Score=581, Expect=0.0]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [RH, Score=572, Expect=0.0]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [RH, Score=611, Expect=0.0]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [RH, Score=637, Expect=0.0]} {Smed: dd_Smed_v6_1184_0_1, dd_Smed_v6_1184_0_1, [RH, Score=649, Expect=0.0]} {RNA1509_23211, RNA1509_5140} {RNA1310_7177.1, RNA1509_23211, RNA1509_5140} {RNA1509_23211, RNA1509_5140, RNA815_1953.1}
8.	MligTC455_52052	1717	35.78	Mlig455_057784	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_057784 {REF} {Length: 1949} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=69.0]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=85.1, Expect=5e-21]} {RNA1509_19601, RNA1509_22256, RNA1509_31639, RNA1509_9185} {RNA1310_15109.1, RNA1509_19601, RNA1509_22256, RNA1509_31639, RNA1509_9185} {RNA1509_19601, RNA1509_22256, RNA1509_31639, RNA1509_9185, RNA815_6173}
9.	MligTC455_14132	440	9.18	Mlig455_042791	Neo: - Age: Down-Up-Down		0.957	-	-	-	-	-	0.957	Mlig455_042791 {REF} {Length: 2871} {RNA1310_38427} {RNA815_24357}
10.	MligTC455_29289	336	7	Mlig455_052963	Neo: - Age: -	RHBDL2	0.957	-	-	-	-	-	0.957	Mlig455_052963 {REF} {Length: 2579} {Pfam: Rhomboid family [PF01694.24, score=107.3]; EF-hand domain pair [PF13499.8, score=21.5]; EF hand [PF00036.34, score=19.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=158, Expect=1e-43]; ENSG00000141314, RHBDL3, rhomboid like 3, [Score=153, Expect=6e-41]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=169, Expect=9e-48]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [Score=163, Expect=1e-44]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=158, Expect=2e-43]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=304, Expect=2e-98]} {RNA1509_2577} {RNA1310_13375} {RNA815_2003.1}
11.	MligTC455_46654	2137	44.52	Mlig455_051380	Neo: - Age: Down-Up-Down	EPS8L2	0.957	-	-	-	-	-	0.957	Mlig455_051380 {REF} {Length: 3696} {TRANSSPLICED} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=42.1]; SH3 domain [PF00018.30, score=23.9]} {Human: ENSG00000177106, EPS8L2, EPS8 like 2, [RH, Score=158, Expect=5e-40]; ENSG00000151491, EPS8, epidermal growth factor receptor pathway substrate 8, [RH, Score=153, Expect=5e-38]} {Mouse: ENSMUSG00000015766, Eps8, epidermal growth factor receptor pathway substrate 8, [RH, Score=159, Expect=6e-40]; ENSMUSG00000025504, Eps8l2, EPS8-like 2, [RH, Score=154, Expect=8e-39]} {Dmel: FBgn0029095, aru, arouser, [RH, Score=161, Expect=4e-41]} {Celegans: WBGene00001330, eps-8, EPS (Human endocytosis) related; Epidermal growth factor receptor pathway substrate 8 splice variant A, [RH, Score=215, Expect=7e-60]} {Smed: dd_Smed_v6_4256_0_1, dd_Smed_v6_4256_0_1, [RH, Score=79.0, Expect=4e-15]} {RNA1509_4398} {RNA1310_3514} {RNA815_6294}
12.	MligTC455_17953	432	9	Mlig455_066894	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_066894 {REF} {Length: 4710} {TRANSSPLICED} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [Score=49.3, Expect=1e-05]} {RNA1509_4363} {RNA1310_1338} {RNA815_4509}
13.	MligTC455_13117	308	6.41	Mlig455_040529	Neo: - Age: Down-Down-Down		0.954	-	-	-	-	0.954	-	Mlig455_040529 {REF} {Length: 2456} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3472) [PF11958.10, score=68.3]; Ricin-type beta-trefoil lectin domain-like [PF14200.8, score=27.6]; Ricin-type beta-trefoil lectin domain [PF00652.24, score=23.9]} {RNA1509_33406, RNA1509_40329, RNA1509_40481, RNA1509_58263} {RNA1310_18012.1, RNA1509_33406, RNA1509_40329, RNA1509_40481, RNA1509_58263} {RNA1509_33406, RNA1509_40329, RNA1509_40481, RNA1509_58263, RNA815_10798}
14.	MligTC455_37823	7227	150.57	Mlig455_024326, Mlig455_024370	Neo: - Age: - Region-enriched R6: 1.236/0.00004		0.953	-	-	-	-	0.953	-	Mlig455_024326 {REF} {Length: 4320} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=60.8]} {Dmel: FBgn0013467, igl, igloo, [Score=68.6, Expect=8e-13]} {Smed: dd_Smed_v6_4783_0_61, dd_Smed_v6_4783_0_61, [Score=75.5, Expect=1e-14]} {RNA1509_56829, RNA1509_909} {RNA1310_4065, RNA1509_56829} {RNA1509_56829, RNA815_5287.1} Mlig455_024370 {REF} {Length: 3528} {TRANSSPLICED} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=38.7]} {Dmel: FBgn0013467, igl, igloo, [Score=46.2, Expect=9e-06]} {Smed: dd_Smed_v6_4783_0_80, dd_Smed_v6_4783_0_80, [RH, Score=50.8, Expect=1e-06]} {RNA1509_39888} {RNA1310_17039, RNA1509_39888} {RNA1509_39888, RNA815_19672}
15.	MligTC455_14271	145	3.03	Mlig455_047488	Neo: - Age: - Region-enriched R6: 3.702/0.01829		0.952	-	-	-	-	-	0.952	Mlig455_047488 {REF} {Length: 2758} {RNA1509_46404} {RNA1310_20821} {RNA815_3479.2}
16.	MligTC455_17952	858	17.88	Mlig455_019484, Mlig455_060545	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_019484 {REF} {Length: 4698} {TRANSSPLICED} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [Score=49.3, Expect=1e-05]} {RNA1509_4363, RNA1509_50959} {RNA1310_1338, RNA1509_50959} {RNA1509_50959, RNA815_4509} Mlig455_060545 {REF} {Length: 4765} {Dmel: FBgn0261934, dikar, [Score=51.2, Expect=8e-06]} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [RH, Score=100, Expect=2e-21]} {RNA1509_4363} {RNA1310_1338} {RNA815_4509}
17.	MligTC455_27001	269	5.6	Mlig455_015615	Neo: - Age: -	NAV2	0.95	-	-	-	-	-	0.950	Mlig455_015615 {REF} {Length: 5528} {TRANSSPLICED} {Human: ENSG00000166833, NAV2, neuron navigator 2, [Score=511, Expect=1e-151]} {Mouse: ENSMUSG00000052512, Nav2, neuron navigator 2, [Score=501, Expect=2e-148]; ENSMUSG00000020181, Nav3, neuron navigator 3, [Score=476, Expect=6e-140]} {Dmel: FBgn0263873, sick, sickie, [Score=358, Expect=1e-102]} {Celegans: WBGene00006788, unc-53, Adapter protein unc-53, [Score=140, Expect=3e-33]} {Smed: dd_Smed_v6_7701_0_2, dd_Smed_v6_7701_0_2, [Score=433, Expect=2e-128]} {RNA1509_12417} {RNA1310_596.1} {RNA815_2589}
18.	MligTC455_30069	780	16.25	Mlig455_069584	Neo: - Age: Up-Down-Up		0.95	-	-	-	-	-	0.950	Mlig455_069584 {REF} {Length: 4747} {TRANSSPLICED} {RNA1509_32679, RNA1509_34888, RNA1509_45586} {RNA1310_14141.1, RNA1509_32679, RNA1509_34888, RNA1509_45586} {RNA1509_32679, RNA1509_34888, RNA1509_45586, RNA815_19001}

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