Data search
Results for MligTC455_24152
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24152 | 323 | 6.73 | Mlig455_055546 | Neo: - Age: Down-Up-Down |
Mlig455_055546 {REF} {Length: 1712} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=21.3]} {Dmel: FBgn0033153, Gadd45, Growth arrest and DNA damage-inducible 45, [RH, Score=46.6, Expect=1e-06]} {RNA1509_18217, RNA1509_39034} {RNA1310_25805, RNA1509_18217, RNA1509_39034} {RNA1509_18217, RNA1509_39034, RNA815_10666} |
Cumulative graph for MligTC455_24152
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.187 | 3.126 | 0.12500 | 0.71979 | |
| RegionR2 | 0.677 | 3.126 | 0.53899 | 0.90795 | |
| RegionR3 | 0.621 | 3.126 | 0.53932 | 1.00000 | |
| RegionR4 | 1.339 | 3.126 | 0.18344 | 0.45506 | |
| RegionR5 | 0.656 | 3.126 | 0.51469 | 0.87761 | |
| RegionR6 | 1.081 | 3.126 | 0.27173 | 0.86118 | |
| RegionR7 | 1.078 | 3.126 | 0.32928 | 0.96447 | |
| RegionR8 | 0.734 | 3.126 | 0.59446 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.88 | 3.126 | 0.19897 | 0.93944 | |
| RegenerationR2 | -1.078 | 3.126 | 0.12971 | 0.55477 | |
| RegenerationR3 | -0.938 | 3.126 | 0.23165 | 0.66629 | |
| RegenerationR4 | -0.487 | 3.126 | 0.51428 | 0.87682 | |
| RegenerationR5 | 0.148 | 3.126 | 0.82777 | 0.99697 | |
| RegenerationR6 | 0.065 | 3.126 | 0.93770 | 1.00000 | |
| RegenerationBL | -2.111 | 3.126 | 0.03830 | 0.22189 | |
| RegenerationTP | 0.741 | 3.126 | 0.38712 | 0.82082 |
Genes with expression patterns similar to MligTC455_24152
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24152 | 323 | 6.73 | Mlig455_055546 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_055546 {REF} {Length: 1712} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=21.3]} {Dmel: FBgn0033153, Gadd45, Growth arrest and DNA damage-inducible 45, [RH, Score=46.6, Expect=1e-06]} {RNA1509_18217, RNA1509_39034} {RNA1310_25805, RNA1509_18217, RNA1509_39034} {RNA1509_18217, RNA1509_39034, RNA815_10666} | |
| 2. | MligTC455_52264 | 118 | 2.46 | Mlig455_018245 | Neo: - Age: - Region-enriched R5: 1.942/0.04303 |
GIT2 | 0.978 | - | - | - | - | - | 0.978 | Mlig455_018245 {REF} {Length: 5129} {Pfam: G protein-coupled receptor kinase-interacting protein 1 C term [PF12205.10, score=90.3]; Putative GTPase activating protein for Arf [PF01412.20, score=81.5]; Spa2 homology domain (SHD) of GIT [PF08518.13, score=44.2]; Coiled-coil domain-containing protein 106 [PF15794.7, score=19.5]} {Human: ENSG00000139436, GIT2, GIT ArfGAP 2, [RH, Score=328, Expect=4e-99]; ENSG00000108262, GIT1, GIT ArfGAP 1, [RH, Score=324, Expect=4e-97]} {Mouse: ENSMUSG00000041890, Git2, G protein-coupled receptor kinase-interactor 2, [RH, Score=328, Expect=1e-99]; ENSMUSG00000011877, Git1, G protein-coupled receptor kinase-interactor 1, [RH, Score=325, Expect=2e-97]} {Dmel: FBgn0033539, Git, G protein-coupled receptor kinase interacting ArfGAP, [RH, Score=282, Expect=3e-82]} {Celegans: WBGene00008805, git-1, GIT1 (Mammalian G protein-coupled receptor kinase InTeractor 1) homolog, [Score=177, Expect=4e-46]} {Smed: dd_Smed_v6_7569_0_1, dd_Smed_v6_7569_0_1, [RH, Score=327, Expect=1e-97]} {RNA1509_17579} {RNA1310_2666.1, RNA1509_17579} {RNA1509_17579, RNA815_12698} |
| 3. | MligTC455_40705 | 147 | 3.06 | Mlig455_052679 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.574 Region-enriched R5: 2.243/0.01305 |
CCDC174 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_052679 {REF} {Length: 1082} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4078) [PF13300.8, score=45.4]} {Human: ENSG00000154781, CCDC174, coiled-coil domain containing 174, [Score=51.6, Expect=1e-06]} {RNA1509_19175} {RNA1310_28722} {RNA815_14570} |
| 4. | MligTC455_40928 | 182 | 3.79 | Mlig455_066590 | Neo: - Age: - |
CHN1 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_066590 {REF} {Length: 4161} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=151.2]; SH2 domain [PF00017.26, score=62.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=46.0]} {Human: ENSG00000128656, CHN1, chimerin 1, [RH, Score=283, Expect=4e-89]} {Mouse: ENSMUSG00000056486, Chn1, chimerin 1, [RH, Score=286, Expect=3e-90]} {Dmel: FBgn0029778, RhoGAP5A, Rho GTPase activating protein at 5A, [RH, Score=247, Expect=3e-75]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [RH, Score=199, Expect=5e-58]} {Smed: dd_Smed_v6_9033_0_1, dd_Smed_v6_9033_0_1, [RH, Score=236, Expect=1e-69]} {RNA1509_39038} {RNA1310_9490, RNA1509_39038} {RNA1509_39038, RNA815_12417} |
| 5. | MligTC455_46202 | 1182 | 24.63 | Mlig455_015525 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.090 Region-enriched R7: 3.843/0.00000 Regeneration-downregulated BL: -3.302 Regeneration-depleted BL: -3.302 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_015525 {REF} {Length: 2230} {RNA1509_26726, RNA1509_40578, RNA1509_41769, RNA1509_55570} {RNA1310_31635.1, RNA1509_26726, RNA1509_40578, RNA1509_41769, RNA1509_55570} {RNA1509_26726, RNA1509_40578, RNA1509_41769, RNA1509_55570, RNA815_27083.1} | |
| 6. | MligTC455_09240 | 297 | 6.19 | Mlig455_023411 | Neo: - Age: Down-Up-Down Region-enriched R7: 5.816/0.00000 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_023411 {REF} {Length: 2218} {RNA1509_41055} {RNA1310_11481.1} {RNA815_19026} | |
| 7. | MligTC455_47565 | 196 | 4.08 | Mlig455_022176 | Neo: - Age: - |
GATAD1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_022176 {REF} {Length: 1469} {TRANSSPLICED} {Human: ENSG00000157259, GATAD1, GATA zinc finger domain containing 1, [Score=82.4, Expect=4e-18]} {Mouse: ENSMUSG00000007415, Gatad1, GATA zinc finger domain containing 1, [Score=80.9, Expect=1e-17]} {RNA1509_44979} {RNA1310_57214.1} {RNA815_28936} |
| 8. | MligTC455_23469 | 443 | 9.24 | Mlig455_028370, Mlig455_068830 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_028370 {REF} {Length: 3100} {Pfam: Ribosomal protein S31e [PF17067.7, score=20.5]} {RNA1509_25511, RNA1509_48699} {RNA1310_13694, RNA1509_48699} {RNA1509_48699, RNA815_7126.1} Mlig455_068830 {REF} {Length: 3621} {RNA1509_25511} {RNA1310_13694, RNA1509_25511} {RNA1509_25511, RNA815_7126.1} |
|
| 9. | MligTC455_32275 | 190 | 3.96 | Mlig455_053289, Mlig455_053423 | Neo: - Age: - Region-enriched R5: 1.900/0.03332 |
GCNT1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_053289 {REF} {Length: 2834} {Pfam: Core-2/I-Branching enzyme [PF02485.23, score=121.8]} {Human: ENSG00000187210, GCNT1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=161, Expect=1e-44]} {Mouse: ENSMUSG00000038843, Gcnt1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=159, Expect=3e-44]} {Celegans: WBGene00001640, gly-15, GLYcosylation related, [RH, Score=141, Expect=1e-37]} {Smed: dd_Smed_v6_12381_0_1, dd_Smed_v6_12381_0_1, [Score=222, Expect=2e-68]} {RNA1310_20147} {RNA815_33080} Mlig455_053423 {REF} {Length: 3391} {Pfam: Core-2/I-Branching enzyme [PF02485.23, score=91.7]} {Human: ENSG00000187210, GCNT1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=120, Expect=9e-31]; ENSG00000140297, GCNT3, glucosaminyl (N-acetyl) transferase 3, mucin type, [Score=117, Expect=1e-29]} {Mouse: ENSMUSG00000038843, Gcnt1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=121, Expect=2e-31]; ENSMUSG00000032226, Gcnt3, glucosaminyl (N-acetyl) transferase 3, mucin type, [Score=115, Expect=3e-29]} {Celegans: WBGene00001626, gly-1, GLY-1; GLYcosylation related, [Score=117, Expect=5e-30]} {Smed: dd_Smed_v6_8413_0_1, dd_Smed_v6_8413_0_1, [Score=176, Expect=7e-54]} {RNA1509_6921} {RNA1310_18449} {RNA815_50015} |
| 10. | MligTC455_11886 | 197 | 4.1 | Mlig455_060688 | Neo: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_060688 {REF} {Length: 2150} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=44.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=36.5]} {Dmel: FBgn0050476, ave, aveugle, [RH, Score=45.4, Expect=1e-06]} {RNA1509_24373, RNA1509_52265} {RNA1310_35457.1, RNA1509_24373, RNA1509_52265} {RNA1509_24373, RNA1509_52265, RNA815_21293} | |
| 11. | MligTC455_46199 | 152 | 3.17 | Mlig455_029921 | Neo: - Age: - Region-enriched R6: 3.135/0.00727 |
LDB3 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_029921 {REF} {Length: 943} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=59.6]; PDZ domain [PF13180.8, score=28.9]; Family of unknown function (DUF6288) [PF19805.1, score=28.5]; PDZ domain [PF17820.3, score=27.3]} {Human: ENSG00000122367, LDB3, LIM domain binding 3, [Score=60.5, Expect=3e-11]; ENSG00000196923, PDLIM7, PDZ and LIM domain 7, [Score=57.8, Expect=5e-11]} {Mouse: ENSMUSG00000021798, Ldb3, LIM domain binding 3, [Score=60.5, Expect=2e-11]; ENSMUSG00000028273, Pdlim5, PDZ and LIM domain 5, [Score=58.2, Expect=2e-10]; ENSMUSG00000021493, Pdlim7, PDZ and LIM domain 7, [Score=58.2, Expect=7e-11]} {Dmel: FBgn0035917, Zasp66, Z band alternatively spliced PDZ-motif protein 66, [Score=64.7, Expect=4e-13]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=57.4, Expect=1e-10]} {Smed: dd_Smed_v6_12834_0_1, dd_Smed_v6_12834_0_1, [RH, Score=77.0, Expect=1e-18]} {RNA1509_39594} {RNA1310_35175, RNA1509_39594} {RNA1509_39594, RNA815_23475} |
| 12. | MligTC455_37543 | 156 | 3.25 | Mlig455_043334 | Neo: - Age: - |
0.952 | - | 0.952 | - | - | - | - | Mlig455_043334 {REF} {Length: 1292} {TRANSSPLICED} {RNA1509_57440} {RNA1310_17682} {RNA815_43178} | |
| 13. | MligTC455_46201 | 1507 | 31.4 | Mlig455_003536 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.432 Region-enriched R7: 4.133/0.00000 Regeneration-downregulated BL: -4.010 Regeneration-depleted BL: -4.010 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_003536 {REF} {Length: 1316} {RNA1509_40578} {RNA1310_31635.1} {RNA815_27083.1} | |
| 14. | MligTC455_51812 | 291 | 6.07 | Mlig455_055926 | Neo: - Age: - Region-enriched R5: 1.948/0.03728 |
RAB29 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_055926 {REF} {Length: 1687} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=158.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.1]; ADP-ribosylation factor family [PF00025.23, score=54.0]; 50S ribosome-binding GTPase [PF01926.25, score=19.7]; Gtr1/RagA G protein conserved region [PF04670.14, score=18.7]} {Human: ENSG00000117280, RAB29, RAB29, member RAS oncogene family, [RH, Score=225, Expect=1e-74]} {Mouse: ENSMUSG00000026433, Rab29, RAB29, member RAS oncogene family, [RH, Score=222, Expect=2e-73]} {Dmel: FBgn0002567, Rab32, [Score=206, Expect=4e-67]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=182, Expect=5e-58]} {Smed: dd_Smed_v6_2915_0_1, dd_Smed_v6_2915_0_1, [RH, Score=234, Expect=1e-78]} {RNA1509_51771} {RNA1310_15012} {RNA815_16250.2} |
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