Data search
Results for MligTC455_24318
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24318 | 30 | 0.63 | Mlig455_003274 | Neo: - Age: logFC(26M/2M)=-0.728 |
SHANK1 | Mlig455_003274 {REF} {Length: 2295} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.6]; Ankyrin repeats (many copies) [PF13637.8, score=87.9]; Ankyrin repeat [PF00023.32, score=77.1]; Ankyrin repeat [PF13606.8, score=67.2]; Ankyrin repeats (many copies) [PF13857.8, score=57.2]} {Human: ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=57.0, Expect=1e-07]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=54.3, Expect=7e-07]} {Mouse: ENSMUSG00000015468, Notch4, notch 4, [Score=59.7, Expect=1e-08]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [Score=57.4, Expect=5e-08]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_2072_0_11, dd_Smed_v6_2072_0_11, [Score=63.2, Expect=3e-10]} {RNA1509_26538} {RNA1310_11708} {RNA815_16205.1} |
Cumulative graph for MligTC455_24318
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.316 | 1.022 | 0.99986 | 1.00000 | |
| RegionR2 | -0.996 | 1.022 | 0.74560 | 1.00000 | |
| RegionR3 | 1.118 | 1.022 | 0.28630 | 0.82809 | |
| RegionR4 | 4.949 | 1.022 | 0.02354 | 0.11437 | |
| RegionR5 | 0.126 | 1.022 | 0.99977 | 1.00000 | |
| RegionR6 | -1.779 | 1.022 | 0.99986 | 1.00000 | |
| RegionR7 | -1.769 | 1.022 | 0.99986 | 1.00000 | |
| RegionR8 | -1.334 | 1.022 | 0.99975 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.415 | 1.022 | 0.99958 | 1.00000 | |
| RegenerationR2 | 0.872 | 1.022 | 0.32866 | 0.76651 | |
| RegenerationR3 | -0.712 | 1.022 | 0.49583 | 0.85641 | |
| RegenerationR4 | -1.186 | 1.022 | 0.50679 | 0.87303 | |
| RegenerationR5 | 1.41 | 1.022 | 0.21732 | 0.65204 | |
| RegenerationR6 | 1.89 | 1.022 | 0.29458 | 0.64518 | |
| RegenerationBL | 2.537 | 1.022 | 0.19896 | 0.53661 | |
| RegenerationTP | 1.667 | 1.022 | 0.55720 | 0.93703 |
Genes with expression patterns similar to MligTC455_24318
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24318 | 30 | 0.63 | Mlig455_003274 | Neo: - Age: logFC(26M/2M)=-0.728 |
SHANK1 | 3 | - | - | 1.000 | 1.000 | - | 1.000 | Mlig455_003274 {REF} {Length: 2295} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.6]; Ankyrin repeats (many copies) [PF13637.8, score=87.9]; Ankyrin repeat [PF00023.32, score=77.1]; Ankyrin repeat [PF13606.8, score=67.2]; Ankyrin repeats (many copies) [PF13857.8, score=57.2]} {Human: ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=57.0, Expect=1e-07]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=54.3, Expect=7e-07]} {Mouse: ENSMUSG00000015468, Notch4, notch 4, [Score=59.7, Expect=1e-08]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [Score=57.4, Expect=5e-08]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_2072_0_11, dd_Smed_v6_2072_0_11, [Score=63.2, Expect=3e-10]} {RNA1509_26538} {RNA1310_11708} {RNA815_16205.1} |
| 2. | MligTC455_41669 | 480 | 10.01 | Mlig455_040778, Mlig455_064613 | Neo: - Age: Down-Down-Up |
0.98 | - | - | - | 0.980 | - | - | Mlig455_040778 {REF} {Length: 2233} {RNA1310_31511} {RNA815_21534} Mlig455_064613 {REF} {Length: 1332} {RNA1310_32935} {RNA815_21534} |
|
| 3. | MligTC455_46837 | 112 | 2.33 | Mlig455_025989 | Neo: - Age: Down-Up-Up |
FANK1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_025989 {REF} {Length: 3471} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=112.5]; Ankyrin repeat [PF00023.32, score=88.9]; Ankyrin repeats (many copies) [PF13857.8, score=84.4]; Ankyrin repeats (many copies) [PF13637.8, score=69.4]; Ankyrin repeat [PF13606.8, score=67.7]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [RH, Score=183, Expect=7e-55]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [RH, Score=171, Expect=3e-50]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=87.4, Expect=2e-18]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=81.6, Expect=8e-17]} {Smed: dd_Smed_v6_7571_0_2, dd_Smed_v6_7571_0_2, [RH, Score=254, Expect=8e-83]} {RNA1509_56411} {RNA1310_27639} {RNA815_23901} |
| 4. | MligTC455_29309 | 97 | 2.02 | Mlig455_024669 | Neo: - Age: - |
0.964 | - | - | - | 0.964 | - | - | Mlig455_024669 {REF} {Length: 620} {NoTransDecoderORF} {RNA1509_42731} {RNA1310_8701} {RNA815_13502} | |
| 5. | MligTC455_33132 | 332 | 6.91 | Mlig455_030500, Mlig455_030509 | Neo: - Age: Up-Down-Down |
ELOVL4 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_030500 {REF} {Length: 2762} {Pfam: GNS1/SUR4 family [PF01151.20, score=210.2]} {Human: ENSG00000118402, ELOVL4, ELOVL fatty acid elongase 4, [Score=285, Expect=1e-95]} {Mouse: ENSMUSG00000032262, Elovl4, elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4, [Score=284, Expect=3e-95]} {Dmel: FBgn0052072, Elo68alpha, Elongase 68alpha, [RH, Score=220, Expect=7e-71]} {Celegans: WBGene00001245, elo-7, Elongation of very long chain fatty acids protein, [Score=84.7, Expect=9e-19]} {Smed: dd_Smed_v6_15507_0_1, dd_Smed_v6_15507_0_1, [RH, Score=321, Expect=3e-110]} {RNA1310_23275} {RNA815_27528} Mlig455_030509 {REF} {Length: 2649} {Pfam: Helix-turn-helix domain of transposase family ISL3 [PF13542.8, score=27.8]} {RNA1509_53064} {RNA1310_51836} {RNA815_4493} |
| 6. | MligTC455_27108 | 126 | 2.63 | Mlig455_063627 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_063627 {REF} {Length: 5807} {Pfam: TIR domain [PF13676.8, score=160.2]; TIR domain [PF01582.22, score=31.5]; MTH538 TIR-like domain (DUF1863) [PF08937.13, score=22.2]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=56.2, Expect=7e-08]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [Score=464, Expect=5e-150]} {RNA1509_47365, RNA1509_50581} {RNA1310_12521, RNA1509_50581} {RNA1509_50581, RNA815_1037} | |
| 7. | MligTC455_37446 | 42 | 0.88 | Mlig455_030051 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_030051 {REF} {Length: 2066} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_33350} {RNA815_14978} | |
| 8. | MligTC455_24301 | 172 | 3.57 | Mlig455_029246 | Neo: - Age: - |
KCNQ5 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_029246 {REF} {Length: 3519} {Pfam: KCNQ voltage-gated potassium channel [PF03520.16, score=122.6]; Ion transport protein [PF00520.33, score=99.3]; Ion channel [PF07885.18, score=51.1]; Putative sensor [PF13796.8, score=18.6]} {Human: ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [RH, Score=477, Expect=9e-155]; ENSG00000117013, KCNQ4, potassium voltage-gated channel subfamily Q member 4, [RH, Score=459, Expect=3e-151]} {Mouse: ENSMUSG00000028033, Kcnq5, potassium voltage-gated channel, subfamily Q, member 5, [RH, Score=476, Expect=1e-154]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [RH, Score=603, Expect=0.0]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [RH, Score=524, Expect=4e-176]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [RH, Score=639, Expect=0.0]} {RNA1509_34272} {RNA1310_3730.1, RNA1509_34272} {RNA1509_34272, RNA815_2787} |
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