TomoSeq data search

Data search

Results for MligTC455_24429

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24429	987	20.57	Mlig455_029312, Mlig455_029335	Neo: - Age: -	SVIL	Mlig455_029312 {REF} {Length: 5723} {Pfam: Gelsolin repeat [PF00626.24, score=56.5]} {Human: ENSG00000197321, SVIL, supervillin, [Score=290, Expect=7e-83]} {Mouse: ENSMUSG00000024236, Svil, supervillin, [Score=293, Expect=3e-82]} {Dmel: FBgn0266696, Svil, Supervillin, [Score=246, Expect=3e-67]} {Celegans: WBGene00015691, viln-1, VILliN related, [Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_4193_0_1, dd_Smed_v6_4193_0_1, [Score=353, Expect=4e-103]} {RNA1509_57637, RNA1509_58549} {RNA1310_4070, RNA1509_58549} {RNA1509_58549, RNA815_5146} Mlig455_029335 {REF} {Length: 5256} {TRANSSPLICED} {Pfam: Gelsolin repeat [PF00626.24, score=77.3]; Villin headpiece domain [PF02209.21, score=42.7]} {Human: ENSG00000197321, SVIL, supervillin, [RH, Score=423, Expect=2e-123]} {Mouse: ENSMUSG00000024236, Svil, supervillin, [RH, Score=427, Expect=4e-125]} {Dmel: FBgn0266696, Svil, Supervillin, [RH, Score=352, Expect=2e-99]} {Celegans: WBGene00015691, viln-1, VILliN related, [RH, Score=125, Expect=8e-29]} {Smed: dd_Smed_v6_4193_0_1, dd_Smed_v6_4193_0_1, [RH, Score=431, Expect=1e-127]} {RNA1509_15342, RNA1509_59437} {RNA1310_4070, RNA1509_15342, RNA1509_59437} {RNA1509_15342, RNA1509_59437, RNA815_5146}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24429

987

20.57

Mlig455_029312, Mlig455_029335

Neo: -

Age: -

SVIL

Mlig455_029312 {REF} {Length: 5723} {Pfam: Gelsolin repeat [PF00626.24, score=56.5]} {Human: ENSG00000197321, SVIL, supervillin, [Score=290, Expect=7e-83]} {Mouse: ENSMUSG00000024236, Svil, supervillin, [Score=293, Expect=3e-82]} {Dmel: FBgn0266696, Svil, Supervillin, [Score=246, Expect=3e-67]} {Celegans: WBGene00015691, viln-1, VILliN related, [Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_4193_0_1, dd_Smed_v6_4193_0_1, [Score=353, Expect=4e-103]} {RNA1509_57637, RNA1509_58549} {RNA1310_4070, RNA1509_58549} {RNA1509_58549, RNA815_5146}

Mlig455_029335 {REF} {Length: 5256} {TRANSSPLICED} {Pfam: Gelsolin repeat [PF00626.24, score=77.3]; Villin headpiece domain [PF02209.21, score=42.7]} {Human: ENSG00000197321, SVIL, supervillin, [RH, Score=423, Expect=2e-123]} {Mouse: ENSMUSG00000024236, Svil, supervillin, [RH, Score=427, Expect=4e-125]} {Dmel: FBgn0266696, Svil, Supervillin, [RH, Score=352, Expect=2e-99]} {Celegans: WBGene00015691, viln-1, VILliN related, [RH, Score=125, Expect=8e-29]} {Smed: dd_Smed_v6_4193_0_1, dd_Smed_v6_4193_0_1, [RH, Score=431, Expect=1e-127]} {RNA1509_15342, RNA1509_59437} {RNA1310_4070, RNA1509_15342, RNA1509_59437} {RNA1509_15342, RNA1509_59437, RNA815_5146}

Cumulative graph for MligTC455_24429

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.041	4.683	0.96883	1.00000
RegionR2	-0.439	4.683	0.41117	0.80466
RegionR3	0.469	4.683	0.23188	0.77386
RegionR4	0.173	4.683	0.73667	1.00000
RegionR5	0.431	4.683	0.23209	0.53929
RegionR6	0.992	4.683	0.01111	0.17950
RegionR7	-0.326	4.683	0.52555	1.00000
RegionR8	-1.341	4.683	0.05020	0.43967

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.534	4.683	0.72766	1.00000
RegenerationR2	0.748	4.683	0.10376	0.50771
RegenerationR3	0.135	4.683	0.78044	0.97564
RegenerationR4	0.322	4.683	0.53334	0.88560
RegenerationR5	0.39	4.683	0.38751	0.78977
RegenerationR6	0.191	4.683	0.67367	0.91033
RegenerationBL	0.07	4.683	0.91004	1.00000
RegenerationTP	0.711	4.683	0.26392	0.71202

Genes with expression patterns similar to MligTC455_24429

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24429	987	20.57	Mlig455_029312, Mlig455_029335	Neo: - Age: -	SVIL	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_029312 {REF} {Length: 5723} {Pfam: Gelsolin repeat [PF00626.24, score=56.5]} {Human: ENSG00000197321, SVIL, supervillin, [Score=290, Expect=7e-83]} {Mouse: ENSMUSG00000024236, Svil, supervillin, [Score=293, Expect=3e-82]} {Dmel: FBgn0266696, Svil, Supervillin, [Score=246, Expect=3e-67]} {Celegans: WBGene00015691, viln-1, VILliN related, [Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_4193_0_1, dd_Smed_v6_4193_0_1, [Score=353, Expect=4e-103]} {RNA1509_57637, RNA1509_58549} {RNA1310_4070, RNA1509_58549} {RNA1509_58549, RNA815_5146} Mlig455_029335 {REF} {Length: 5256} {TRANSSPLICED} {Pfam: Gelsolin repeat [PF00626.24, score=77.3]; Villin headpiece domain [PF02209.21, score=42.7]} {Human: ENSG00000197321, SVIL, supervillin, [RH, Score=423, Expect=2e-123]} {Mouse: ENSMUSG00000024236, Svil, supervillin, [RH, Score=427, Expect=4e-125]} {Dmel: FBgn0266696, Svil, Supervillin, [RH, Score=352, Expect=2e-99]} {Celegans: WBGene00015691, viln-1, VILliN related, [RH, Score=125, Expect=8e-29]} {Smed: dd_Smed_v6_4193_0_1, dd_Smed_v6_4193_0_1, [RH, Score=431, Expect=1e-127]} {RNA1509_15342, RNA1509_59437} {RNA1310_4070, RNA1509_15342, RNA1509_59437} {RNA1509_15342, RNA1509_59437, RNA815_5146}
2.	MligTC455_47397	223	4.65	Mlig455_045414	Neo: - Age: Down-Down-Up	B3GNT4	0.957	-	-	-	0.957	-	-	Mlig455_045414 {REF} {Length: 2211} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=126.2]} {Human: ENSG00000176383, B3GNT4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [RH, Score=112, Expect=7e-27]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=107, Expect=4e-25]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=104, Expect=1e-24]} {Dmel: FBgn0035558, CG11357, [Score=128, Expect=2e-32]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=73.6, Expect=3e-14]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [RH, Score=259, Expect=3e-83]} {RNA1509_45947, RNA1509_48792} {RNA1310_17060, RNA1509_45947, RNA1509_48792} {RNA1509_45947, RNA1509_48792, RNA815_18250}
3.	MligTC455_53280	1632	34	Mlig455_066972	Neo: - Age: -	PDHA2	0.954	-	-	-	0.954	-	-	Mlig455_066972 {REF} {Length: 3344} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=402.1]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=25.6]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=19.4]} {Human: ENSG00000163114, PDHA2, pyruvate dehydrogenase E1 alpha 2 subunit, [RH, Score=455, Expect=7e-160]; ENSG00000131828, PDHA1, pyruvate dehydrogenase E1 alpha 1 subunit, [RH, Score=449, Expect=3e-157]} {Mouse: ENSMUSG00000031299, Pdha1, pyruvate dehydrogenase E1 alpha 1, [RH, Score=479, Expect=3e-169]} {Dmel: FBgn0028325, l(1)G0334, lethal (1) G0334, [RH, Score=456, Expect=3e-160]} {Celegans: WBGene00011510, pdha-1, Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial, [RH, Score=506, Expect=4e-180]} {Smed: dd_Smed_v6_1310_0_1, dd_Smed_v6_1310_0_1, [RH, Score=468, Expect=1e-165]} {RNA1509_14154, RNA1509_15765, RNA1509_16921, RNA1509_39832, RNA1509_4824, RNA1509_55395} {RNA1310_20196.1, RNA1509_14154, RNA1509_15765, RNA1509_16921, RNA1509_39832, RNA1509_4824, RNA1509_55395} {RNA1509_14154, RNA1509_15765, RNA1509_16921, RNA1509_39832, RNA1509_4824, RNA1509_55395, RNA815_9327}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_24429

987

20.57

Mlig455_029312, Mlig455_029335

Neo: -

Age: -

SVIL

1.000

MligTC455_47397

223

4.65

Mlig455_045414

Neo: -

Age: Down-Down-Up

B3GNT4

0.957

Mlig455_045414 {REF} {Length: 2211} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=126.2]} {Human: ENSG00000176383, B3GNT4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [RH, Score=112, Expect=7e-27]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=107, Expect=4e-25]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=104, Expect=1e-24]} {Dmel: FBgn0035558, CG11357, [Score=128, Expect=2e-32]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=73.6, Expect=3e-14]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [RH, Score=259, Expect=3e-83]} {RNA1509_45947, RNA1509_48792} {RNA1310_17060, RNA1509_45947, RNA1509_48792} {RNA1509_45947, RNA1509_48792, RNA815_18250}

MligTC455_53280

1632

Mlig455_066972

Neo: -

Age: -

PDHA2

0.954

Mlig455_066972 {REF} {Length: 3344} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=402.1]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=25.6]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=19.4]} {Human: ENSG00000163114, PDHA2, pyruvate dehydrogenase E1 alpha 2 subunit, [RH, Score=455, Expect=7e-160]; ENSG00000131828, PDHA1, pyruvate dehydrogenase E1 alpha 1 subunit, [RH, Score=449, Expect=3e-157]} {Mouse: ENSMUSG00000031299, Pdha1, pyruvate dehydrogenase E1 alpha 1, [RH, Score=479, Expect=3e-169]} {Dmel: FBgn0028325, l(1)G0334, lethal (1) G0334, [RH, Score=456, Expect=3e-160]} {Celegans: WBGene00011510, pdha-1, Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial, [RH, Score=506, Expect=4e-180]} {Smed: dd_Smed_v6_1310_0_1, dd_Smed_v6_1310_0_1, [RH, Score=468, Expect=1e-165]} {RNA1509_14154, RNA1509_15765, RNA1509_16921, RNA1509_39832, RNA1509_4824, RNA1509_55395} {RNA1310_20196.1, RNA1509_14154, RNA1509_15765, RNA1509_16921, RNA1509_39832, RNA1509_4824, RNA1509_55395} {RNA1509_14154, RNA1509_15765, RNA1509_16921, RNA1509_39832, RNA1509_4824, RNA1509_55395, RNA815_9327}