TomoSeq data search

Data search

Results for MligTC455_24460

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24460

140

2.92

Mlig455_032375

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.843

Regeneration-depleted R2: -5.945
Regeneration-depleted R6: -5.768
Regeneration-depleted R4: -4.606
Regeneration-depleted R3: -3.353

AQP9

Mlig455_032375 {REF} {Length: 1669} {Pfam: Major intrinsic protein [PF00230.22, score=114.4]} {Human: ENSG00000103569, AQP9, aquaporin 9, [Score=122, Expect=1e-31]} {Mouse: ENSMUSG00000032204, Aqp9, aquaporin 9, [Score=122, Expect=1e-31]} {Dmel: FBgn0015872, Drip, [Score=48.1, Expect=4e-06]} {Celegans: WBGene00000170, aqp-2, AQuaPorin or aquaglyceroporin related, [Score=108, Expect=9e-27]} {Smed: dd_Smed_v6_34551_0_1, dd_Smed_v6_34551_0_1, [Score=94.7, Expect=6e-22]} {RNA1509_36118} {RNA1310_21074.1, RNA1509_36118} {RNA1509_36118, RNA815_7755}

Cumulative graph for MligTC455_24460

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.201	2.1	0.05187	0.53536
RegionR2	2.132	2.1	0.03388	0.21069
RegionR3	1.404	2.1	0.07584	0.48808
RegionR4	-0.746	2.1	0.97563	1.00000
RegionR5	-0.36	2.1	0.93763	1.00000
RegionR6	1.446	2.1	0.07560	0.51065
RegionR7	2.396	2.1	0.00384	0.09126
RegionR8	0.93	2.1	0.47359	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.474	2.1	0.99999	1.00000
RegenerationR2	-5.945	2.1	0.00000	0.00004
RegenerationR3	-3.353	2.1	0.00004	0.00571
RegenerationR4	-4.606	2.1	0.00001	0.00126
RegenerationR5	-3.485	2.1	0.00018	0.01967
RegenerationR6	-5.768	2.1	0.00000	0.00119
RegenerationBL	-5.977	2.1	0.00239	0.04065
RegenerationTP	-2.035	2.1	0.06180	0.40254

Genes with expression patterns similar to MligTC455_24460

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24460	140	2.92	Mlig455_032375	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.843 Regeneration-depleted R2: -5.945 Regeneration-depleted R6: -5.768 Regeneration-depleted R4: -4.606 Regeneration-depleted R3: -3.353	AQP9	3	1.000	1.000	1.000	-	-	-	Mlig455_032375 {REF} {Length: 1669} {Pfam: Major intrinsic protein [PF00230.22, score=114.4]} {Human: ENSG00000103569, AQP9, aquaporin 9, [Score=122, Expect=1e-31]} {Mouse: ENSMUSG00000032204, Aqp9, aquaporin 9, [Score=122, Expect=1e-31]} {Dmel: FBgn0015872, Drip, [Score=48.1, Expect=4e-06]} {Celegans: WBGene00000170, aqp-2, AQuaPorin or aquaglyceroporin related, [Score=108, Expect=9e-27]} {Smed: dd_Smed_v6_34551_0_1, dd_Smed_v6_34551_0_1, [Score=94.7, Expect=6e-22]} {RNA1509_36118} {RNA1310_21074.1, RNA1509_36118} {RNA1509_36118, RNA815_7755}
2.	MligTC455_24461	107	2.24	Mlig455_032401	Neo: - Age: Down-Up-Down Region-enriched R2: 3.816/0.00695 Region-enriched R7: 2.920/0.04378 Regeneration-downregulated R3: -4.797 Regeneration-depleted R3: -4.797	AQP9	2.616	0.954	0.872	0.790	-	-	-	Mlig455_032401 {REF} {Length: 1636} {Pfam: Major intrinsic protein [PF00230.22, score=115.3]} {Human: ENSG00000103569, AQP9, aquaporin 9, [Score=120, Expect=4e-31]} {Mouse: ENSMUSG00000032204, Aqp9, aquaporin 9, [Score=121, Expect=3e-31]} {Dmel: FBgn0015872, Drip, [Score=48.5, Expect=3e-06]} {Celegans: WBGene00000170, aqp-2, AQuaPorin or aquaglyceroporin related, [Score=107, Expect=1e-26]} {Smed: dd_Smed_v6_34551_0_1, dd_Smed_v6_34551_0_1, [Score=95.1, Expect=3e-22]} {RNA1509_36118} {RNA1310_21074.1} {RNA815_7755}
3.	MligTC455_43942	388	8.09	Mlig455_035015	Neo: - Age: Up-Down-Down Region-enriched R7: 5.805/0.00000 Region-enriched R8: 4.159/0.00114	OSBPL1A	0.962	-	-	0.962	-	-	-	Mlig455_035015 {REF} {Length: 2506} {Pfam: Oxysterol-binding protein [PF01237.20, score=389.2]} {Human: ENSG00000141447, OSBPL1A, oxysterol binding protein like 1A, [RH, Score=366, Expect=6e-117]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [RH, Score=373, Expect=1e-119]} {Dmel: FBgn0034951, CG3860, [Score=360, Expect=2e-120]} {Celegans: WBGene00008832, obr-2, Oxysterol Binding protein (OSBP) Related, [Score=198, Expect=2e-58]} {Smed: dd_Smed_v6_12759_0_1, dd_Smed_v6_12759_0_1, [RH, Score=338, Expect=1e-111]} {RNA1509_33899, RNA1509_46266} {RNA1310_17186, RNA1509_33899, RNA1509_46266} {RNA1509_33899, RNA1509_46266, RNA815_22518}
4.	MligTC455_15849	863	17.97	Mlig455_057363, Mlig455_057368, Mlig455_059567	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_057363 {REF} {Length: 1048} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267} {RNA815_15008} Mlig455_057368 {REF} {Length: 1049} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267, RNA1509_56468} {RNA1509_56468, RNA815_15008} Mlig455_059567 {REF} {Length: 2018} {Pfam: Dynein light chain type 1 [PF01221.20, score=61.1]; EF hand [PF00036.34, score=35.1]; EF-hand domain pair [PF13499.8, score=35.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF13202.8, score=19.7]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=43.1, Expect=9e-06]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=140, Expect=1e-41]} {RNA1509_56468} {RNA1310_32267} {RNA815_15008}

Berezikov Lab - 2020-2021 © ERIBA