TomoSeq data search

Data search

Results for MligTC455_24488

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24488

717

14.94

Mlig455_001285

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=0.363

UCKL1

Mlig455_001285 {REF} {Length: 4876} {Pfam: Uracil phosphoribosyltransferase [PF14681.8, score=207.0]; Phosphoribulokinase / Uridine kinase family [PF00485.20, score=187.5]; Fibronectin type III domain [PF00041.23, score=51.4]; AAA domain [PF13238.8, score=24.0]} {Human: ENSG00000198276, UCKL1, uridine-cytidine kinase 1 like 1, [RH, Score=548, Expect=0.0]} {Mouse: ENSMUSG00000089917, Uckl1, uridine-cytidine kinase 1-like 1, [RH, Score=549, Expect=0.0]} {Dmel: FBgn0022029, l(2)k01209, lethal (2) k01209, [RH, Score=527, Expect=1e-173]} {Celegans: WBGene00008948, F19B6.1, Uridine kinase, [RH, Score=494, Expect=8e-162]} {Smed: dd_Smed_v6_2901_0_1, dd_Smed_v6_2901_0_1, [RH, Score=520, Expect=8e-173]} {RNA1509_10599, RNA1509_17847} {RNA1310_6639, RNA1509_17847} {RNA1509_17847, RNA815_6729.1}

Cumulative graph for MligTC455_24488

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.65	4.159	0.07952	0.61697
RegionR2	-0.964	4.159	0.04402	0.24635
RegionR3	-0.239	4.159	0.50793	0.99745
RegionR4	1.049	4.159	0.01792	0.09417
RegionR5	0.911	4.159	0.00304	0.02386
RegionR6	-0.657	4.159	0.09475	0.56525
RegionR7	-0.776	4.159	0.14152	0.70306
RegionR8	-0.976	4.159	0.13449	0.67119

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.497	4.159	0.32035	1.00000
RegenerationR2	0.964	4.159	0.01487	0.19964
RegenerationR3	0.864	4.159	0.04370	0.36508
RegenerationR4	0.146	4.159	0.74054	0.96759
RegenerationR5	0.185	4.159	0.62084	0.91923
RegenerationR6	1.481	4.159	0.00092	0.03294
RegenerationBL	1.296	4.159	0.01646	0.13613
RegenerationTP	0.538	4.159	0.38907	0.82206

Genes with expression patterns similar to MligTC455_24488

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24488	717	14.94	Mlig455_001285	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=0.363	UCKL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001285 {REF} {Length: 4876} {Pfam: Uracil phosphoribosyltransferase [PF14681.8, score=207.0]; Phosphoribulokinase / Uridine kinase family [PF00485.20, score=187.5]; Fibronectin type III domain [PF00041.23, score=51.4]; AAA domain [PF13238.8, score=24.0]} {Human: ENSG00000198276, UCKL1, uridine-cytidine kinase 1 like 1, [RH, Score=548, Expect=0.0]} {Mouse: ENSMUSG00000089917, Uckl1, uridine-cytidine kinase 1-like 1, [RH, Score=549, Expect=0.0]} {Dmel: FBgn0022029, l(2)k01209, lethal (2) k01209, [RH, Score=527, Expect=1e-173]} {Celegans: WBGene00008948, F19B6.1, Uridine kinase, [RH, Score=494, Expect=8e-162]} {Smed: dd_Smed_v6_2901_0_1, dd_Smed_v6_2901_0_1, [RH, Score=520, Expect=8e-173]} {RNA1509_10599, RNA1509_17847} {RNA1310_6639, RNA1509_17847} {RNA1509_17847, RNA815_6729.1}
2.	MligTC455_23780	715	14.9	Mlig455_016765	Neo: Int S/G2/M Age: - Regeneration-upregulated R6: 1.869 Regeneration-enriched R6: 1.869	SNRNP200	2.599	0.816	-	-	0.828	0.955	-	Mlig455_016765 {REF} {Length: 2988} {Pfam: Sec63 Brl domain [PF02889.18, score=245.8]; Helicase conserved C-terminal domain [PF00271.33, score=19.0]} {Human: ENSG00000144028, SNRNP200, small nuclear ribonucleoprotein U5 subunit 200, [Score=810, Expect=0.0]} {Mouse: ENSMUSG00000003660, Snrnp200, small nuclear ribonucleoprotein 200 (U5), [Score=810, Expect=0.0]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [Score=811, Expect=0.0]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [Score=675, Expect=0.0]} {Smed: dd_Smed_v6_3022_0_1, dd_Smed_v6_3022_0_1, [Score=635, Expect=0.0]} {RNA1509_1464, RNA1509_51603} {RNA1310_469.2, RNA1509_51603} {RNA1509_51603, RNA815_1538}
3.	MligTC455_46781	1485	30.95	Mlig455_008732	Neo: - Age: -	MPDZ	0.954	-	-	-	-	-	0.954	Mlig455_008732 {REF} {Length: 3847} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=263.3]; PDZ domain [PF17820.3, score=163.7]; PDZ domain [PF13180.8, score=90.0]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [RH, Score=303, Expect=1e-84]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [RH, Score=298, Expect=4e-83]} {Dmel: FBgn0067864, Patj, [Score=253, Expect=2e-70]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [RH, Score=228, Expect=1e-60]} {Smed: dd_Smed_v6_6739_0_1, dd_Smed_v6_6739_0_1, [RH, Score=453, Expect=8e-143]} {RNA1509_19766, RNA1509_45401} {RNA1310_2836, RNA1509_19766, RNA1509_45401} {RNA1509_19766, RNA1509_45401, RNA815_782}
4.	MligTC455_46782	1480	30.84	Mlig455_008749	Neo: - Age: logFC(26M/2M)=1.054	MPDZ	0.952	-	-	-	-	-	0.952	Mlig455_008749 {REF} {Length: 1408} {Pfam: PDZ domain [PF00595.26, score=48.3]; PDZ domain [PF17820.3, score=41.5]; PDZ domain [PF13180.8, score=21.3]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=53.5, Expect=1e-07]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=55.5, Expect=3e-08]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=72.8, Expect=2e-14]} {Smed: dd_Smed_v6_6739_0_1, dd_Smed_v6_6739_0_1, [Score=71.2, Expect=5e-14]} {RNA1509_51877} {RNA1310_19881} {RNA815_782}
5.	MligTC455_46783	1478	30.8	Mlig455_063601	Neo: - Age: Down-Down-Up	MPDZ	0.951	-	-	-	-	-	0.951	Mlig455_063601 {REF} {Length: 3852} {Pfam: PDZ domain [PF00595.26, score=188.5]; PDZ domain [PF17820.3, score=128.0]; PDZ domain [PF13180.8, score=67.2]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [RH, Score=309, Expect=1e-86]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [RH, Score=302, Expect=1e-84]} {Dmel: FBgn0067864, Patj, [Score=257, Expect=9e-72]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [RH, Score=231, Expect=1e-61]} {Smed: dd_Smed_v6_6739_0_2, dd_Smed_v6_6739_0_2, [Score=263, Expect=7e-74]} {RNA1509_7206} {RNA1310_2300} {RNA815_782}

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